RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
CX3CL1-201ENST00000006053 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
CX3CL1-201ENST00000006053 RETNLBQ9BQ08 111 aa6.33□□□□□ -1.4
CX3CL1-201ENST00000006053 A0A1B0GVX0 72 aa6.32□□□□□ -1.4
CX3CL1-201ENST00000006053 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
CX3CL1-201ENST00000006053 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
CX3CL1-201ENST00000006053 A0A087X002 238 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 SPACA4Q8TDM5 124 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 Q6ZR54 194 aa6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
CX3CL1-201ENST00000006053 MEGF8Q7Z7M0 2845 aa6.29□□□□□ -1.4
CX3CL1-201ENST00000006053 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
CX3CL1-201ENST00000006053 LY6G6CO95867 125 aa6.28□□□□□ -1.4
CX3CL1-201ENST00000006053 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
CX3CL1-201ENST00000006053 WWC2-AS2Q96NR7 200 aa6.28□□□□□ -1.4
CX3CL1-201ENST00000006053 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
CX3CL1-201ENST00000006053 PSORS1C2Q9UIG4 136 aa6.28□□□□□ -1.4
CX3CL1-201ENST00000006053 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
CX3CL1-201ENST00000006053 HRES1P13985 223 aa6.27□□□□□ -1.41
CX3CL1-201ENST00000006053 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
CX3CL1-201ENST00000006053 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
CX3CL1-201ENST00000006053 FBN3Q75N90 2809 aa6.24□□□□□ -1.41
CX3CL1-201ENST00000006053 A0A087WTM6 91 aa6.24□□□□□ -1.41
CX3CL1-201ENST00000006053 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
CX3CL1-201ENST00000006053 RTL8CO15255 209 aa6.23□□□□□ -1.41
CX3CL1-201ENST00000006053 ZNF861PO60384 105 aa6.23□□□□□ -1.41
CX3CL1-201ENST00000006053 Q5W150 140 aa6.22□□□□□ -1.41
CX3CL1-201ENST00000006053 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
CX3CL1-201ENST00000006053 NUPR2A6NF83 97 aa6.22□□□□□ -1.41
CX3CL1-201ENST00000006053 FRAS1Q86XX4 4008 aa6.21□□□□□ -1.42
CX3CL1-201ENST00000006053 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
CX3CL1-201ENST00000006053 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
CX3CL1-201ENST00000006053 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
CX3CL1-201ENST00000006053 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
CX3CL1-201ENST00000006053 IGLV7-43P04211 117 aa6.14□□□□□ -1.43
CX3CL1-201ENST00000006053 ACYP2P14621 99 aa6.14□□□□□ -1.43
CX3CL1-201ENST00000006053 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
CX3CL1-201ENST00000006053 STARD9Q9P2P6 4700 aa6.13□□□□□ -1.43
CX3CL1-201ENST00000006053 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
CX3CL1-201ENST00000006053 VPS13DQ5THJ4 4388 aa6.12□□□□□ -1.43
CX3CL1-201ENST00000006053 DNAH17Q9UFH2 4485 aa6.11□□□□□ -1.43
CX3CL1-201ENST00000006053 A0A1B0GU69 56 aa6.11□□□□□ -1.43
CX3CL1-201ENST00000006053 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
CX3CL1-201ENST00000006053 KMT2AQ03164 3969 aa6.09□□□□□ -1.43
CX3CL1-201ENST00000006053 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
CX3CL1-201ENST00000006053 SSBP3-AS1Q7Z2R9 100 aa6.07□□□□□ -1.44
CX3CL1-201ENST00000006053 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
CX3CL1-201ENST00000006053 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
CX3CL1-201ENST00000006053 FAM229AH3BQW9 127 aa6.06□□□□□ -1.44
CX3CL1-201ENST00000006053 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
CX3CL1-201ENST00000006053 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
CX3CL1-201ENST00000006053 UQCR11O14957 56 aa6.04□□□□□ -1.44
CX3CL1-201ENST00000006053 ROMO1P60602 79 aa6.04□□□□□ -1.44
CX3CL1-201ENST00000006053 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
CX3CL1-201ENST00000006053 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
CX3CL1-201ENST00000006053 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
CX3CL1-201ENST00000006053 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
CX3CL1-201ENST00000006053 DNAH11Q96DT5 4516 aa6□□□□□ -1.45
CX3CL1-201ENST00000006053 KRTAP10-2P60368 255 aa5.99□□□□□ -1.45
CX3CL1-201ENST00000006053 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
CX3CL1-201ENST00000006053 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
CX3CL1-201ENST00000006053 SPINK1P00995 79 aa5.94□□□□□ -1.46
CX3CL1-201ENST00000006053 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
CX3CL1-201ENST00000006053 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
CX3CL1-201ENST00000006053 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
CX3CL1-201ENST00000006053 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
CX3CL1-201ENST00000006053 LRP1BQ9NZR2 4599 aa5.91□□□□□ -1.46
CX3CL1-201ENST00000006053 KRTAP10-1P60331 282 aa5.91□□□□□ -1.46
CX3CL1-201ENST00000006053 Q8N1X5 172 aa5.9□□□□□ -1.47
CX3CL1-201ENST00000006053 P0C880 135 aa5.89□□□□□ -1.47
CX3CL1-201ENST00000006053 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
CX3CL1-201ENST00000006053 TYMSOSQ8TAI1 123 aa5.87□□□□□ -1.47
CX3CL1-201ENST00000006053 A8MUU9 505 aa5.85□□□□□ -1.47
CX3CL1-201ENST00000006053 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
CX3CL1-201ENST00000006053 Q6ZSA8 131 aa5.84□□□□□ -1.47
CX3CL1-201ENST00000006053 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
CX3CL1-201ENST00000006053 KRTAP21-3Q3LHN1 58 aa5.8□□□□□ -1.48
CX3CL1-201ENST00000006053 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
CX3CL1-201ENST00000006053 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
CX3CL1-201ENST00000006053 LINC00304Q8N9R0 145 aa5.79□□□□□ -1.48
CX3CL1-201ENST00000006053 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
CX3CL1-201ENST00000006053 PKD1P98161 4303 aa5.76□□□□□ -1.49
CX3CL1-201ENST00000006053 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
CX3CL1-201ENST00000006053 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
CX3CL1-201ENST00000006053 H0YAA0 97 aa5.7□□□□□ -1.5
CX3CL1-201ENST00000006053 FAT1Q14517 4588 aa5.68□□□□□ -1.5
CX3CL1-201ENST00000006053 A0A1B0GU33 70 aa5.68□□□□□ -1.5
CX3CL1-201ENST00000006053 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
CX3CL1-201ENST00000006053 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
CX3CL1-201ENST00000006053 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.5
CX3CL1-201ENST00000006053 RPS29P62273 56 aaKnown RBP5.65□□□□□ -1.51
CX3CL1-201ENST00000006053 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
CX3CL1-201ENST00000006053 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
CX3CL1-201ENST00000006053 K7ERS5 55 aa5.63□□□□□ -1.51
CX3CL1-201ENST00000006053 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
CX3CL1-201ENST00000006053 DYNC1H1Q14204 4646 aaKnown RBP5.57□□□□□ -1.52
CX3CL1-201ENST00000006053 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 962.7 ms