RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Gm13030A2APQ6 143 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Pfn1P62962 140 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Samd5Q3V1H9 173 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 1700001C19RikQ8K168 210 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Chchd5Q9CQP3 110 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gkn1Q9CR36 201 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ss18l2Q9D174 77 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ndufs7Q9DC70 224 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm4064A0A087WR82 380 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm10352B2RWR6 380 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm21693J3QK27 380 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Rbmy1a1O35698 380 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Tomm40Q9QYA2 361 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 AcanQ61282 2132 aaKnown RBP6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm29423A0A087WRM1 55 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 ApohQ01339 345 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Dand5Q76LW6 185 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 March3Q8BRX9 218 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ube2e1P52482 193 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Fam110dQ80X91 271 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Stpg1Q9D2F5 341 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Tmem52Q9D702 196 aa6.73□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Olfr484Q8VFD3 321 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 RhohQ9D3G9 191 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Cpsf4lE9Q2N0 280 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Foxs1Q61574 329 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 OtosQ8R448 89 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 MrapQ9D159 127 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Cspg4Q8VHY0 2327 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Dido1Q8C9B9 2256 aaKnown RBP6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 MgamB5THE2 1827 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Igkv4-61A0A0G2JH00 117 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Tmem141A2AJB2 108 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Wdr86D3Z757 380 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 LeprotO89013 131 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Chac1Q8R3J5 223 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Rnf138Q9CQE0 245 aaKnown RBP6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 1700013G24RikQ9DAC6 286 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ighv5-9-1A0A0A6YVS4 126 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Trbv3A0A0A6YYE2 117 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Tctex1d4Q8CDY7 219 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 C1qtnf5Q8K479 243 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 SNORCQ9CXL7 121 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Dnase2P56542 353 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Wdr83osQ6ZWX0 106 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Spg11Q3UHA3 2430 aa6.72□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Igkv4-59A0A0B4J1I8 117 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Olfr745Q7TRL9 328 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ntf4Q80VU4 209 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Mgst3Q9CPU4 153 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 P01738 130 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Spata46Q4FZF2 204 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 A730015C16RikQ8C992 119 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Dpm2Q9Z324 84 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Olfr984Q8VFN1 314 aa6.71□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ighv1-9A0A0A6YW37 117 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 4931422A03RikA2BHN9 113 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Hbb-bsA8DUK4 147 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Hbb-b1P02088 147 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Pygo2Q80V76 405 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 B1ARW8 110 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Zfp72Q0VFY0 435 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Gm10767Q3TQP0 103 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Znf474Q6V5K9 347 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Defb3Q9WTL0 63 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 P06330 118 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Dmrtc2Q8CGW9 370 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Znf22Q9ERU3 237 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Nup210Q9QY81 1886 aaKnown RBP6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ndufa1O35683 70 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Klrd1O54707 179 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Pate4Q09098 99 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ssbp2Q9CYZ8 361 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Lime1Q9EQR5 269 aa6.71□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Igkv4-63A0A0G2JFU6 117 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Shisal2aA2A9G7 189 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ighv1-62-3P01754 117 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Igkv4-54A0A0G2JES9 117 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Igkv4-81A0A0G2JEY5 119 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Lage3Q9CR70 148 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Igkv13-85A0A075B666 115 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Mrpl53Q9D1H8 118 aaKnown RBP6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Gm10912Q3UXH0 145 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Mpv17l2Q8VIK2 200 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Pcnx3Q8VI59 2028 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Zcwpw2Q08EN7 125 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Timm10bQ9WV96 100 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Tcf24V9GWT9 166 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Gm2174F6ZVF2 133 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ube2wQ8VDW4 151 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Rnf217D3YYI7 515 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 MdfiP70331 251 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Gm10842Q3U587 122 aa6.7□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ighv1-69A0A0G2JFS5 117 aa6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Olfr211Q8VGH2 309 aa6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Ccl6P27784 116 aa6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Lyrm9Q3UN90 78 aa6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Sorl1O88307 2215 aaKnown RBP6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Gm26727M0QWT1 121 aa6.69□□□□□ -1.34
Ssr1-201ENSMUST00000021864 Socs3O35718 225 aa6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms