RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 C3orf22Q8N5N4 141 aa11.92□□□□□ -0.5
PHGDH-210ENST00000641115 KIAA1109Q2LD37 5005 aa11.91□□□□□ -0.5
PHGDH-210ENST00000641115 HSPG2P98160 4391 aa11.89□□□□□ -0.51
PHGDH-210ENST00000641115 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
PHGDH-210ENST00000641115 F8WEM9 126 aa11.89□□□□□ -0.51
PHGDH-210ENST00000641115 ETDBQ3ZM63 59 aa11.89□□□□□ -0.51
PHGDH-210ENST00000641115 SMIM29Q86T20 159 aa11.89□□□□□ -0.51
PHGDH-210ENST00000641115 A0A1B0GV72 72 aa11.88□□□□□ -0.51
PHGDH-210ENST00000641115 JMJD7-PLA2G4BH0Y9G9 81 aa11.88□□□□□ -0.51
PHGDH-210ENST00000641115 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
PHGDH-210ENST00000641115 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
PHGDH-210ENST00000641115 FAT1Q14517 4588 aa11.84□□□□□ -0.51
PHGDH-210ENST00000641115 KRTAP1-4P0C5Y4 121 aa11.83□□□□□ -0.52
PHGDH-210ENST00000641115 RBM3P98179 157 aaKnown RBP11.83□□□□□ -0.52
PHGDH-210ENST00000641115 FAM229BQ4G0N7 80 aa11.83□□□□□ -0.52
PHGDH-210ENST00000641115 KRTAP17-1Q9BYP8 105 aa11.83□□□□□ -0.52
PHGDH-210ENST00000641115 IGLV9-49A0A0B4J1Y8 123 aa11.82□□□□□ -0.52
PHGDH-210ENST00000641115 OBSCN-AS1Q96MR7 158 aa11.82□□□□□ -0.52
PHGDH-210ENST00000641115 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
PHGDH-210ENST00000641115 DSCR8Q96T75 97 aa11.8□□□□□ -0.52
PHGDH-210ENST00000641115 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
PHGDH-210ENST00000641115 CRYGAP11844 174 aa11.78□□□□□ -0.52
PHGDH-210ENST00000641115 IGLV8-61A0A075B6I0 122 aa11.78□□□□□ -0.52
PHGDH-210ENST00000641115 A0A087X002 238 aa11.77□□□□□ -0.53
PHGDH-210ENST00000641115 MOBPQ13875 183 aa11.77□□□□□ -0.53
PHGDH-210ENST00000641115 Q8NBF4 154 aa11.77□□□□□ -0.53
PHGDH-210ENST00000641115 HERC2O95714 4834 aa11.77□□□□□ -0.53
PHGDH-210ENST00000641115 TRBV7-4A0A0J9YYF1 115 aa11.75□□□□□ -0.53
PHGDH-210ENST00000641115 Q6JHZ5 121 aa11.75□□□□□ -0.53
PHGDH-210ENST00000641115 LOC110117498A0A087WWA1 95 aa11.73□□□□□ -0.53
PHGDH-210ENST00000641115 PDE6GP18545 87 aa11.73□□□□□ -0.53
PHGDH-210ENST00000641115 IGFL1Q6UW32 110 aa11.72□□□□□ -0.53
PHGDH-210ENST00000641115 KRTAP13-2Q52LG2 175 aa11.71□□□□□ -0.53
PHGDH-210ENST00000641115 Q6ZQT0 140 aa11.71□□□□□ -0.54
PHGDH-210ENST00000641115 C21orf62-AS1Q17RA5 79 aa11.69□□□□□ -0.54
PHGDH-210ENST00000641115 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
PHGDH-210ENST00000641115 PRR26Q8N8Z3 221 aa11.69□□□□□ -0.54
PHGDH-210ENST00000641115 CCKP06307 115 aa11.68□□□□□ -0.54
PHGDH-210ENST00000641115 A0A0G2JQZ4 141 aa11.68□□□□□ -0.54
PHGDH-210ENST00000641115 TYMSOSQ8TAI1 123 aa11.68□□□□□ -0.54
PHGDH-210ENST00000641115 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
PHGDH-210ENST00000641115 KRTAP4-5Q9BYR2 181 aa11.64□□□□□ -0.55
PHGDH-210ENST00000641115 PKHD1L1Q86WI1 4243 aa11.64□□□□□ -0.55
PHGDH-210ENST00000641115 J3QR89 54 aa11.64□□□□□ -0.55
PHGDH-210ENST00000641115 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
PHGDH-210ENST00000641115 Q6Q795 121 aa11.6□□□□□ -0.55
PHGDH-210ENST00000641115 HRCT1Q6UXD1 115 aa11.58□□□□□ -0.56
PHGDH-210ENST00000641115 K7ERU9 68 aa11.57□□□□□ -0.56
PHGDH-210ENST00000641115 A0A1B0GW54 56 aa11.57□□□□□ -0.56
PHGDH-210ENST00000641115 CD164Q04900 197 aa11.57□□□□□ -0.56
PHGDH-210ENST00000641115 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
PHGDH-210ENST00000641115 FAM240AA0A1B0GVK7 77 aa11.55□□□□□ -0.56
PHGDH-210ENST00000641115 TRBV7-7A0A0K0K1E9 115 aa11.54□□□□□ -0.56
PHGDH-210ENST00000641115 ACYP1P07311 99 aa11.54□□□□□ -0.56
PHGDH-210ENST00000641115 LINC00304Q8N9R0 145 aa11.54□□□□□ -0.56
PHGDH-210ENST00000641115 ABCA13Q86UQ4 5058 aa11.54□□□□□ -0.56
PHGDH-210ENST00000641115 A0A087WSZ3 146 aa11.53□□□□□ -0.56
PHGDH-210ENST00000641115 OXTP01178 125 aa11.52□□□□□ -0.57
PHGDH-210ENST00000641115 KRTAP10-8P60410 259 aa11.51□□□□□ -0.57
PHGDH-210ENST00000641115 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-210ENST00000641115 SPAG11AQ6PDA7 123 aa11.5□□□□□ -0.57
PHGDH-210ENST00000641115 SPINK1P00995 79 aa11.49□□□□□ -0.57
PHGDH-210ENST00000641115 LINC00846Q9NV44 126 aa11.48□□□□□ -0.57
PHGDH-210ENST00000641115 SS18L2Q9UHA2 77 aa11.47□□□□□ -0.57
PHGDH-210ENST00000641115 LIMD2Q9BT23 127 aa11.46□□□□□ -0.58
PHGDH-210ENST00000641115 PCLOQ9Y6V0 5065 aa11.45□□□□□ -0.58
PHGDH-210ENST00000641115 UBL5Q9BZL1 73 aa11.45□□□□□ -0.58
PHGDH-210ENST00000641115 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-210ENST00000641115 RPS29P62273 56 aaKnown RBP11.43□□□□□ -0.58
PHGDH-210ENST00000641115 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
PHGDH-210ENST00000641115 NREPQ16612 68 aa11.42□□□□□ -0.58
PHGDH-210ENST00000641115 LRP1Q07954 4544 aaKnown RBP11.42□□□□□ -0.58
PHGDH-210ENST00000641115 Q6ZVQ6 151 aa11.41□□□□□ -0.58
PHGDH-210ENST00000641115 Q5XG85 94 aa11.4□□□□□ -0.58
PHGDH-210ENST00000641115 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
PHGDH-210ENST00000641115 MYCBP2O75592 4640 aa11.37□□□□□ -0.59
PHGDH-210ENST00000641115 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
PHGDH-210ENST00000641115 CDIP1Q9H305 208 aa11.34□□□□□ -0.59
PHGDH-210ENST00000641115 J3QL48 77 aa11.32□□□□□ -0.6
PHGDH-210ENST00000641115 LINC00472Q9H8W2 130 aa11.32□□□□□ -0.6
PHGDH-210ENST00000641115 LINC00643Q86TS7 51 aa11.31□□□□□ -0.6
PHGDH-210ENST00000641115 TNXBP22105 4242 aa11.3□□□□□ -0.6
PHGDH-210ENST00000641115 BPY2O14599 106 aa11.3□□□□□ -0.6
PHGDH-210ENST00000641115 Q96NJ1 140 aa11.3□□□□□ -0.6
PHGDH-210ENST00000641115 DEFB116Q30KQ4 102 aa11.29□□□□□ -0.6
PHGDH-210ENST00000641115 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
PHGDH-210ENST00000641115 C1orf195Q5TG92 126 aa11.27□□□□□ -0.6
PHGDH-210ENST00000641115 J3KT08 172 aa11.27□□□□□ -0.61
PHGDH-210ENST00000641115 IGKV4-1P06312 121 aa11.27□□□□□ -0.61
PHGDH-210ENST00000641115 ATP5EP2Q5VTU8 51 aa11.27□□□□□ -0.61
PHGDH-210ENST00000641115 CXCL6P80162 114 aa11.24□□□□□ -0.61
PHGDH-210ENST00000641115 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
PHGDH-210ENST00000641115 DMBT1Q9UGM3 2413 aaPredicted RBP11.21□□□□□ -0.62
PHGDH-210ENST00000641115 RETNLBQ9BQ08 111 aa11.2□□□□□ -0.62
PHGDH-210ENST00000641115 DSCR10P59022 87 aa11.19□□□□□ -0.62
PHGDH-210ENST00000641115 A8MWP4 228 aa11.18□□□□□ -0.62
PHGDH-210ENST00000641115 NDUFB1O75438 58 aa11.17□□□□□ -0.62
PHGDH-210ENST00000641115 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
PHGDH-210ENST00000641115 K7EQZ3 153 aa11.14□□□□□ -0.63
PHGDH-210ENST00000641115 Q8N9L7 120 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms