RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 DNAH11Q96DT5 4516 aa10.63□□□□□ -0.71
PHGDH-208ENST00000641023 DNAH8Q96JB1 4490 aa10.61□□□□□ -0.71
PHGDH-208ENST00000641023 FAT2Q9NYQ8 4349 aa10.6□□□□□ -0.71
PHGDH-208ENST00000641023 IGLV8-61A0A075B6I0 122 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 LCE6AA0A183 80 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 A0A1W2PNM2 257 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 HAMPP81172 84 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 Q8NBF4 154 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
PHGDH-208ENST00000641023 CIRBP-AS1Q8TBR5 109 aa10.58□□□□□ -0.72
PHGDH-208ENST00000641023 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
PHGDH-208ENST00000641023 ZNF861PO60384 105 aa10.57□□□□□ -0.72
PHGDH-208ENST00000641023 NREPQ16612 68 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 FAM236AA0A1B0GUQ0 79 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 FAM236BA0A1B0GV22 79 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
PHGDH-208ENST00000641023 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 Q6ZSA8 131 aa10.56□□□□□ -0.72
PHGDH-208ENST00000641023 KRTAP10-1P60331 282 aa10.55□□□□□ -0.72
PHGDH-208ENST00000641023 CXCL6P80162 114 aa10.55□□□□□ -0.72
PHGDH-208ENST00000641023 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-208ENST00000641023 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
PHGDH-208ENST00000641023 ANAPC13Q9BS18 74 aa10.54□□□□□ -0.72
PHGDH-208ENST00000641023 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
PHGDH-208ENST00000641023 PKD1P98161 4303 aa10.54□□□□□ -0.72
PHGDH-208ENST00000641023 CRYGAP11844 174 aa10.53□□□□□ -0.72
PHGDH-208ENST00000641023 LINC00336Q6ZUF6 198 aa10.53□□□□□ -0.72
PHGDH-208ENST00000641023 IGLV7-43P04211 117 aa10.51□□□□□ -0.73
PHGDH-208ENST00000641023 A0A087WVE0 104 aa10.5□□□□□ -0.73
PHGDH-208ENST00000641023 LINC00483Q53H64 154 aa10.49□□□□□ -0.73
PHGDH-208ENST00000641023 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
PHGDH-208ENST00000641023 BPY2O14599 106 aa10.46□□□□□ -0.74
PHGDH-208ENST00000641023 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
PHGDH-208ENST00000641023 A0A087WSZ3 146 aa10.43□□□□□ -0.74
PHGDH-208ENST00000641023 ATOX1O00244 68 aa10.43□□□□□ -0.74
PHGDH-208ENST00000641023 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
PHGDH-208ENST00000641023 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
PHGDH-208ENST00000641023 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PHGDH-208ENST00000641023 ANAPC11Q9NYG5 84 aa10.37□□□□□ -0.75
PHGDH-208ENST00000641023 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
PHGDH-208ENST00000641023 MOBPQ13875 183 aa10.35□□□□□ -0.75
PHGDH-208ENST00000641023 Q8N9L7 120 aa10.35□□□□□ -0.75
PHGDH-208ENST00000641023 RYR2Q92736 4967 aa10.35□□□□□ -0.75
PHGDH-208ENST00000641023 IGKV4-1P06312 121 aa10.34□□□□□ -0.75
PHGDH-208ENST00000641023 KMT2CQ8NEZ4 4911 aaKnown RBP10.33□□□□□ -0.76
PHGDH-208ENST00000641023 PKHD1P08F94 4074 aa10.32□□□□□ -0.76
PHGDH-208ENST00000641023 DSCR10P59022 87 aa10.31□□□□□ -0.76
PHGDH-208ENST00000641023 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
PHGDH-208ENST00000641023 COX7CP15954 63 aa10.29□□□□□ -0.76
PHGDH-208ENST00000641023 SERP2Q8N6R1 65 aa10.29□□□□□ -0.76
PHGDH-208ENST00000641023 UQCRQO14949 82 aa10.28□□□□□ -0.76
PHGDH-208ENST00000641023 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
PHGDH-208ENST00000641023 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.76
PHGDH-208ENST00000641023 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.77
PHGDH-208ENST00000641023 K7EQZ3 153 aa10.26□□□□□ -0.77
PHGDH-208ENST00000641023 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
PHGDH-208ENST00000641023 DYNC1H1Q14204 4646 aaKnown RBP10.26□□□□□ -0.77
PHGDH-208ENST00000641023 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
PHGDH-208ENST00000641023 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
PHGDH-208ENST00000641023 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
PHGDH-208ENST00000641023 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
PHGDH-208ENST00000641023 J3KT08 172 aa10.21□□□□□ -0.77
PHGDH-208ENST00000641023 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
PHGDH-208ENST00000641023 A0A087X002 238 aa10.19□□□□□ -0.78
PHGDH-208ENST00000641023 CD164Q04900 197 aa10.19□□□□□ -0.78
PHGDH-208ENST00000641023 A8MWP4 228 aa10.18□□□□□ -0.78
PHGDH-208ENST00000641023 SMR3BP02814 79 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-208ENST00000641023 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
PHGDH-208ENST00000641023 KRTAP1-4P0C5Y4 121 aa10.17□□□□□ -0.78
PHGDH-208ENST00000641023 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
PHGDH-208ENST00000641023 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
PHGDH-208ENST00000641023 Q96NJ1 140 aa10.16□□□□□ -0.78
PHGDH-208ENST00000641023 NDUFB1O75438 58 aa10.15□□□□□ -0.78
PHGDH-208ENST00000641023 KRTAP13-2Q52LG2 175 aa10.15□□□□□ -0.78
PHGDH-208ENST00000641023 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
PHGDH-208ENST00000641023 APOBP04114 4563 aaKnown RBP10.13□□□□□ -0.79
PHGDH-208ENST00000641023 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
PHGDH-208ENST00000641023 CDK2AP2O75956 126 aa10.08□□□□□ -0.8
PHGDH-208ENST00000641023 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
PHGDH-208ENST00000641023 C20orf197Q8N268 126 aa10.08□□□□□ -0.8
PHGDH-208ENST00000641023 RYR3Q15413 4870 aa10.08□□□□□ -0.8
PHGDH-208ENST00000641023 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
PHGDH-208ENST00000641023 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
PHGDH-208ENST00000641023 FAT1Q14517 4588 aa10.06□□□□□ -0.8
PHGDH-208ENST00000641023 ASB16-AS1Q495Z4 193 aa10.05□□□□□ -0.8
PHGDH-208ENST00000641023 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-208ENST00000641023 Q5XG85 94 aa10.04□□□□□ -0.8
PHGDH-208ENST00000641023 KRTAP10-4P60372 401 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-208ENST00000641023 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
PHGDH-208ENST00000641023 A0A1B0GVX0 72 aa10.02□□□□□ -0.81
PHGDH-208ENST00000641023 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
PHGDH-208ENST00000641023 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
PHGDH-208ENST00000641023 LIMD2Q9BT23 127 aa10.01□□□□□ -0.81
PHGDH-208ENST00000641023 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
PHGDH-208ENST00000641023 CYSTM1Q9H1C7 97 aa10□□□□□ -0.81
PHGDH-208ENST00000641023 hDV103S1A0JD37 113 aa9.99□□□□□ -0.81
PHGDH-208ENST00000641023 TMEM254Q8TBM7 123 aa9.99□□□□□ -0.81
PHGDH-208ENST00000641023 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
PHGDH-208ENST00000641023 C8orf17Q9NRJ1 99 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms