RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	PKD1L1	Q8TDX9	2849 aa		5.26	□□□□□ -1.57
RTTN-223	ENST00000640931	PRB2	P02812	416 aa	Predicted RBP	5.26	□□□□□ -1.57
RTTN-223	ENST00000640931	PLAC8	Q9NZF1	115 aa		5.26	□□□□□ -1.57
RTTN-223	ENST00000640931	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.25	□□□□□ -1.57
RTTN-223	ENST00000640931	IGHV4-28	A0A0C4DH34	117 aa		5.25	□□□□□ -1.57
RTTN-223	ENST00000640931	IGHV4-30-4	P0DP06	118 aa		5.25	□□□□□ -1.57
RTTN-223	ENST00000640931		Q8N9L7	120 aa		5.25	□□□□□ -1.57
RTTN-223	ENST00000640931	LINC00476	Q8WZB0	136 aa		5.25	□□□□□ -1.57
RTTN-223	ENST00000640931	HTN3	P15516	51 aa		5.24	□□□□□ -1.57
RTTN-223	ENST00000640931	GYPE	P15421	78 aa		5.23	□□□□□ -1.57
RTTN-223	ENST00000640931	KCNQ1DN	Q9H478	68 aa		5.23	□□□□□ -1.57
RTTN-223	ENST00000640931	CLPSL2	Q6UWE3	100 aa		5.22	□□□□□ -1.57
RTTN-223	ENST00000640931		H3BPC8	53 aa		5.22	□□□□□ -1.57
RTTN-223	ENST00000640931	CNBP	P62633	177 aa	Known RBP	5.22	□□□□□ -1.57
RTTN-223	ENST00000640931		Q8NAQ8	132 aa		5.22	□□□□□ -1.57
RTTN-223	ENST00000640931	KRTAP17-1	Q9BYP8	105 aa		5.22	□□□□□ -1.57
RTTN-223	ENST00000640931	ADM2	Q7Z4H4	148 aa		5.21	□□□□□ -1.58
RTTN-223	ENST00000640931	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.2	□□□□□ -1.58
RTTN-223	ENST00000640931		A0A1B0GW54	56 aa		5.2	□□□□□ -1.58
RTTN-223	ENST00000640931	C10orf25	Q5T742	122 aa		5.2	□□□□□ -1.58
RTTN-223	ENST00000640931	NOTCH2NL	Q7Z3S9	236 aa		5.2	□□□□□ -1.58
RTTN-223	ENST00000640931	TOMM7	Q9P0U1	55 aa		5.2	□□□□□ -1.58
RTTN-223	ENST00000640931	TENM3	Q9P273	2699 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	RTL8C	O15255	209 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	TNP2	Q05952	138 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	SPAG11B	Q08648	103 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931		Q6ZQY7	126 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	ST20-AS1	Q8NBB2	130 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	NOTCH1	P46531	2555 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	SPINK7	P58062	85 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	HIGD2B	Q4VC39	106 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931	COA5	Q86WW8	74 aa		5.19	□□□□□ -1.58
RTTN-223	ENST00000640931		A0A1W2PNM2	257 aa		5.17	□□□□□ -1.58
RTTN-223	ENST00000640931	PRO0255	Q9UI72	69 aa		5.17	□□□□□ -1.58
RTTN-223	ENST00000640931	DNAH9	Q9NYC9	4486 aa		5.17	□□□□□ -1.58
RTTN-223	ENST00000640931	KRTAP4-7	Q9BYR0	210 aa		5.16	□□□□□ -1.58
RTTN-223	ENST00000640931	IGLV10-54	A0A075B6I4	117 aa		5.16	□□□□□ -1.58
RTTN-223	ENST00000640931	MEGF8	Q7Z7M0	2845 aa		5.15	□□□□□ -1.58
RTTN-223	ENST00000640931	DNAH1	Q9P2D7	4330 aa		5.15	□□□□□ -1.58
RTTN-223	ENST00000640931	COX17	Q14061	63 aa		5.15	□□□□□ -1.59
RTTN-223	ENST00000640931	LCE1D	Q5T752	114 aa		5.15	□□□□□ -1.59
RTTN-223	ENST00000640931	C1orf134	Q5TEV5	83 aa		5.15	□□□□□ -1.59
RTTN-223	ENST00000640931		A0A0J9YWU9	116 aa		5.14	□□□□□ -1.59
RTTN-223	ENST00000640931	LINC00959	A0A1B0GUT2	108 aa		5.14	□□□□□ -1.59
RTTN-223	ENST00000640931	SPART-AS1	P0CW21	52 aa		5.14	□□□□□ -1.59
RTTN-223	ENST00000640931	EGFEM1P	Q0D2K5	195 aa		5.14	□□□□□ -1.59
RTTN-223	ENST00000640931	LYST	Q99698	3801 aa		5.13	□□□□□ -1.59
RTTN-223	ENST00000640931	KLK12	Q9UKR0	248 aa		5.13	□□□□□ -1.59
RTTN-223	ENST00000640931		H0Y9P7	68 aa		5.12	□□□□□ -1.59
RTTN-223	ENST00000640931	ROMO1	P60602	79 aa		5.12	□□□□□ -1.59
RTTN-223	ENST00000640931	CSAG1	Q6PB30	78 aa		5.12	□□□□□ -1.59
RTTN-223	ENST00000640931	SPAG11A	Q6PDA7	123 aa		5.12	□□□□□ -1.59
RTTN-223	ENST00000640931	C9orf163	Q8N9P6	203 aa		5.12	□□□□□ -1.59
RTTN-223	ENST00000640931	IGLV7-46	A0A075B6I9	117 aa		5.11	□□□□□ -1.59
RTTN-223	ENST00000640931	ANG	P03950	147 aa	Known RBP	5.11	□□□□□ -1.59
RTTN-223	ENST00000640931		Q8IZM0	81 aa		5.11	□□□□□ -1.59
RTTN-223	ENST00000640931		K7EIL1	84 aa		5.11	□□□□□ -1.59
RTTN-223	ENST00000640931	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.11	□□□□□ -1.59
RTTN-223	ENST00000640931	TG	P01266	2768 aa		5.1	□□□□□ -1.59
RTTN-223	ENST00000640931	IGLV6-57	P01721	117 aa		5.1	□□□□□ -1.59
RTTN-223	ENST00000640931	WFDC10B	Q8IUB3	73 aa		5.1	□□□□□ -1.59
RTTN-223	ENST00000640931	DNAH10	Q8IVF4	4471 aa		5.1	□□□□□ -1.59
RTTN-223	ENST00000640931		Q6ZR54	194 aa		5.09	□□□□□ -1.59
RTTN-223	ENST00000640931	REG3A	Q06141	175 aa		5.09	□□□□□ -1.59
RTTN-223	ENST00000640931	KPRP	Q5T749	579 aa	Predicted RBP	5.09	□□□□□ -1.59
RTTN-223	ENST00000640931		A0A1B0GUV1	79 aa		5.08	□□□□□ -1.6
RTTN-223	ENST00000640931	DSCR10	P59022	87 aa		5.07	□□□□□ -1.6
RTTN-223	ENST00000640931	MGAM2	Q2M2H8	2515 aa		5.07	□□□□□ -1.6
RTTN-223	ENST00000640931	LELP1	Q5T871	98 aa		5.06	□□□□□ -1.6
RTTN-223	ENST00000640931	XAGE1A	Q9HD64	81 aa		5.06	□□□□□ -1.6
RTTN-223	ENST00000640931	DNAH7	Q8WXX0	4024 aa		5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	PLEC	Q15149	4684 aa	Known RBP	5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	PRKDC	P78527	4128 aa	Known RBP	5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	DEFB131B	A0A096LNP1	70 aa		5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	FAM229A	H3BQW9	127 aa		5.05	□□□□□ -1.6
RTTN-223	ENST00000640931		K7EQZ3	153 aa		5.05	□□□□□ -1.6
RTTN-223	ENST00000640931		Q8NDZ9	215 aa		5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.05	□□□□□ -1.6
RTTN-223	ENST00000640931	IGKV2D-24	A0A075B6R9	120 aa		5.04	□□□□□ -1.6
RTTN-223	ENST00000640931	SPATA8	Q6RVD6	105 aa		5.04	□□□□□ -1.6
RTTN-223	ENST00000640931	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.04	□□□□□ -1.6
RTTN-223	ENST00000640931	COL7A1	Q02388	2944 aa		5.03	□□□□□ -1.6
RTTN-223	ENST00000640931	IGLV5-48	A0A075B6I7	105 aa		5.03	□□□□□ -1.6
RTTN-223	ENST00000640931	MIR22HG	Q0VDD5	57 aa		5.02	□□□□□ -1.61
RTTN-223	ENST00000640931	REG3G	Q6UW15	175 aa		5.02	□□□□□ -1.61
RTTN-223	ENST00000640931	KRTAP4-9	Q9BYQ8	210 aa		5.02	□□□□□ -1.61
RTTN-223	ENST00000640931	CASC10	Q5T4H9	136 aa		5.01	□□□□□ -1.61
RTTN-223	ENST00000640931	PRR34	Q9NV39	138 aa		5.01	□□□□□ -1.61
RTTN-223	ENST00000640931	CSMD3	Q7Z407	3707 aa		5.01	□□□□□ -1.61
RTTN-223	ENST00000640931	IGLV1-50	A0A075B6I6	118 aa		5.01	□□□□□ -1.61
RTTN-223	ENST00000640931	KRTAP26-1	Q6PEX3	210 aa		5.01	□□□□□ -1.61
RTTN-223	ENST00000640931	BIRC6	Q9NR09	4857 aa		5	□□□□□ -1.61
RTTN-223	ENST00000640931	SPRR4	Q96PI1	79 aa		5	□□□□□ -1.61
RTTN-223	ENST00000640931	STARD9	Q9P2P6	4700 aa		5	□□□□□ -1.61
RTTN-223	ENST00000640931		Q8NBF4	154 aa		5	□□□□□ -1.61
RTTN-223	ENST00000640931	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.98	□□□□□ -1.61
RTTN-223	ENST00000640931	IGLV5-37	A0A075B6J1	123 aa		4.98	□□□□□ -1.61
RTTN-223	ENST00000640931	C6orf48	Q9UBA6	75 aa		4.98	□□□□□ -1.61
RTTN-223	ENST00000640931		H3BNG1	76 aa		4.97	□□□□□ -1.61
RTTN-223	ENST00000640931	C15orf56	Q8N910	161 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms