RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	HSBP1L1	C9JCN9	74 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	CD164	Q04900	197 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	SLC25A34	Q6PIV7	304 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	SMIM29	Q86T20	159 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	MUSTN1	Q8IVN3	82 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	OR13C6P	Q8NH95	151 aa		5.91	□□□□□ -1.46
PAX6-238	ENST00000638755	TRAV23DV6	A0A075B6W5	121 aa		5.9	□□□□□ -1.46
PAX6-238	ENST00000638755	LAMTOR3	Q9UHA4	124 aa		5.9	□□□□□ -1.46
PAX6-238	ENST00000638755	TRBV20-1	A0A075B6N2	111 aa		5.89	□□□□□ -1.47
PAX6-238	ENST00000638755		Q5XG85	94 aa		5.89	□□□□□ -1.47
PAX6-238	ENST00000638755	ZNF73	O43830	326 aa	Predicted RBP	5.88	□□□□□ -1.47
PAX6-238	ENST00000638755	PRO1933	Q9H354	126 aa		5.88	□□□□□ -1.47
PAX6-238	ENST00000638755	PAM16	Q9Y3D7	125 aa		5.88	□□□□□ -1.47
PAX6-238	ENST00000638755	IFITM1	P13164	125 aa		5.87	□□□□□ -1.47
PAX6-238	ENST00000638755	SPRR1B	P22528	89 aa		5.87	□□□□□ -1.47
PAX6-238	ENST00000638755		Q1RN00	199 aa		5.87	□□□□□ -1.47
PAX6-238	ENST00000638755	C14orf144	Q96I85	54 aa		5.87	□□□□□ -1.47
PAX6-238	ENST00000638755	COX8A	P10176	69 aa		5.86	□□□□□ -1.47
PAX6-238	ENST00000638755	SPATA45	Q537H7	98 aa		5.86	□□□□□ -1.47
PAX6-238	ENST00000638755		Q6ZVH6	145 aa		5.86	□□□□□ -1.47
PAX6-238	ENST00000638755	C20orf166-AS1	Q96NR2	134 aa		5.86	□□□□□ -1.47
PAX6-238	ENST00000638755		A0A0G2JQZ4	141 aa		5.85	□□□□□ -1.47
PAX6-238	ENST00000638755		Q75L30	129 aa		5.85	□□□□□ -1.47
PAX6-238	ENST00000638755	LINC00518	Q8N0U6	118 aa		5.85	□□□□□ -1.47
PAX6-238	ENST00000638755	FAM236D	A0A1B0GTK5	79 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755		A6NDN8	102 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755	FAM236C	P0DP71	79 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755	PYY3	Q5JQD4	70 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755	OBSCN-AS1	Q96MR7	158 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755	VAMP8	Q9BV40	100 aa		5.84	□□□□□ -1.47
PAX6-238	ENST00000638755		A4D1N5	150 aa		5.83	□□□□□ -1.48
PAX6-238	ENST00000638755	C6orf99	Q4VX62	202 aa		5.83	□□□□□ -1.48
PAX6-238	ENST00000638755	COPS9	Q8WXC6	57 aa		5.83	□□□□□ -1.48
PAX6-238	ENST00000638755	DLEU1	O43261	78 aa		5.82	□□□□□ -1.48
PAX6-238	ENST00000638755	C2orf91	Q6ZV80	131 aa		5.82	□□□□□ -1.48
PAX6-238	ENST00000638755	DEFB105A	Q8NG35	78 aa		5.82	□□□□□ -1.48
PAX6-238	ENST00000638755	HIST1H4G	Q99525	98 aa		5.82	□□□□□ -1.48
PAX6-238	ENST00000638755	C12orf57	Q99622	126 aa		5.82	□□□□□ -1.48
PAX6-238	ENST00000638755	COX7B	P24311	80 aa		5.81	□□□□□ -1.48
PAX6-238	ENST00000638755	HINT1	P49773	126 aa	Predicted RBP	5.81	□□□□□ -1.48
PAX6-238	ENST00000638755	TCL1B	O95988	128 aa		5.8	□□□□□ -1.48
PAX6-238	ENST00000638755	ELOF1	P60002	83 aa	Known RBP	5.8	□□□□□ -1.48
PAX6-238	ENST00000638755	TAL2	Q16559	108 aa		5.8	□□□□□ -1.48
PAX6-238	ENST00000638755	SMIM11B	Q8TCY0	68 aa		5.8	□□□□□ -1.48
PAX6-238	ENST00000638755	CBY1	Q9Y3M2	126 aa		5.8	□□□□□ -1.48
PAX6-238	ENST00000638755	TRAV13-2	A0A0B4J235	113 aa		5.79	□□□□□ -1.48
PAX6-238	ENST00000638755	DHRS4-AS1	Q9P1J3	65 aa		5.78	□□□□□ -1.48
PAX6-238	ENST00000638755	HIGD1B	Q9P298	99 aa		5.78	□□□□□ -1.48
PAX6-238	ENST00000638755	TRBV7-6	A0A0J9YX20	115 aa		5.76	□□□□□ -1.49
PAX6-238	ENST00000638755		Q96NJ1	140 aa		5.76	□□□□□ -1.49
PAX6-238	ENST00000638755	MDN1	Q9NU22	5596 aa		5.76	□□□□□ -1.49
PAX6-238	ENST00000638755	KMT2D	O14686	5537 aa		5.75	□□□□□ -1.49
PAX6-238	ENST00000638755		A0A1B0GWB2	263 aa		5.75	□□□□□ -1.49
PAX6-238	ENST00000638755	KRTAP4-8	Q9BYQ9	185 aa		5.75	□□□□□ -1.49
PAX6-238	ENST00000638755	TEX49	A0A1B0GTD5	131 aa		5.74	□□□□□ -1.49
PAX6-238	ENST00000638755	FXYD2	P54710	66 aa		5.73	□□□□□ -1.49
PAX6-238	ENST00000638755	CEND1	Q8N111	149 aa		5.73	□□□□□ -1.49
PAX6-238	ENST00000638755	LINC00575	Q6W349	94 aa		5.71	□□□□□ -1.5
PAX6-238	ENST00000638755	RAB37	Q96AX2	223 aa		5.71	□□□□□ -1.5
PAX6-238	ENST00000638755		A0A0B4J2C4	111 aa		5.7	□□□□□ -1.5
PAX6-238	ENST00000638755	LOC105371267	A0A1B0GV96	52 aa		5.7	□□□□□ -1.5
PAX6-238	ENST00000638755	VAMP3	Q15836	100 aa		5.7	□□□□□ -1.5
PAX6-238	ENST00000638755	RBM12B-AS1	Q9P1G2	102 aa		5.7	□□□□□ -1.5
PAX6-238	ENST00000638755	IGLV5-48	A0A075B6I7	105 aa		5.69	□□□□□ -1.5
PAX6-238	ENST00000638755		K7ERJ3	54 aa		5.69	□□□□□ -1.5
PAX6-238	ENST00000638755	HSD52	Q0P140	79 aa		5.69	□□□□□ -1.5
PAX6-238	ENST00000638755	IGFL1	Q6UW32	110 aa		5.69	□□□□□ -1.5
PAX6-238	ENST00000638755		Q8N9P0	234 aa	Predicted RBP	5.69	□□□□□ -1.5
PAX6-238	ENST00000638755	UQCR10	Q9UDW1	63 aa		5.69	□□□□□ -1.5
PAX6-238	ENST00000638755	hADV29S1	A0JD25	119 aa		5.68	□□□□□ -1.5
PAX6-238	ENST00000638755		Q6ZQY7	126 aa		5.68	□□□□□ -1.5
PAX6-238	ENST00000638755	NHP2	Q9NX24	153 aa	Known RBP	5.68	□□□□□ -1.5
PAX6-238	ENST00000638755	KRTAP2-3	P0C7H8	128 aa		5.67	□□□□□ -1.5
PAX6-238	ENST00000638755	FAM218A	Q96MZ4	157 aa		5.67	□□□□□ -1.5
PAX6-238	ENST00000638755	KRTAP2-4	Q9BYR9	128 aa		5.67	□□□□□ -1.5
PAX6-238	ENST00000638755	PRO1854	Q9UHT4	67 aa		5.67	□□□□□ -1.5
PAX6-238	ENST00000638755	TMEM238L	A0A1B0GVL6	79 aa		5.66	□□□□□ -1.5
PAX6-238	ENST00000638755		A6NJY4	79 aa		5.66	□□□□□ -1.5
PAX6-238	ENST00000638755		A8MUU9	505 aa		5.66	□□□□□ -1.5
PAX6-238	ENST00000638755	BVES-AS1	Q5T3Y7	98 aa		5.66	□□□□□ -1.5
PAX6-238	ENST00000638755	MPLKIP	Q8TAP9	179 aa		5.65	□□□□□ -1.5
PAX6-238	ENST00000638755	KRTAP16-1	A8MUX0	517 aa		5.64	□□□□□ -1.51
PAX6-238	ENST00000638755	TRIAP1	O43715	76 aa		5.64	□□□□□ -1.51
PAX6-238	ENST00000638755	SMIM6	P0DI80	62 aa		5.63	□□□□□ -1.51
PAX6-238	ENST00000638755	HRES1	P13985	223 aa		5.63	□□□□□ -1.51
PAX6-238	ENST00000638755	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.62	□□□□□ -1.51
PAX6-238	ENST00000638755	CLEC2B	Q92478	149 aa		5.62	□□□□□ -1.51
PAX6-238	ENST00000638755	TRBV7-7	A0A0K0K1E9	115 aa		5.61	□□□□□ -1.51
PAX6-238	ENST00000638755		H0YGX0	51 aa		5.61	□□□□□ -1.51
PAX6-238	ENST00000638755	KRTAP5-9	P26371	169 aa		5.6	□□□□□ -1.51
PAX6-238	ENST00000638755		A8MWP4	228 aa		5.59	□□□□□ -1.51
PAX6-238	ENST00000638755		F8WEM9	126 aa		5.59	□□□□□ -1.51
PAX6-238	ENST00000638755	PSMB2	P49721	201 aa		5.59	□□□□□ -1.51
PAX6-238	ENST00000638755		A6NN06	94 aa		5.58	□□□□□ -1.52
PAX6-238	ENST00000638755		H3BUT2	72 aa		5.58	□□□□□ -1.52
PAX6-238	ENST00000638755	LST1	O00453	97 aa		5.57	□□□□□ -1.52
PAX6-238	ENST00000638755	OCIAD2	Q56VL3	154 aa		5.57	□□□□□ -1.52
PAX6-238	ENST00000638755	SNHG12	Q9BXW3	62 aa		5.57	□□□□□ -1.52
PAX6-238	ENST00000638755	NOTCH2NL	Q7Z3S9	236 aa		5.56	□□□□□ -1.52
PAX6-238	ENST00000638755	MTURN	Q8N3F0	131 aa		5.55	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms