RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
SCARB2-209ENST00000638409 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
SCARB2-209ENST00000638409 M0R2N4 97 aa4.8□□□□□ -1.64
SCARB2-209ENST00000638409 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
SCARB2-209ENST00000638409 DNAH17Q9UFH2 4485 aa4.8□□□□□ -1.64
SCARB2-209ENST00000638409 CIRBPQ14011 172 aaKnown RBP4.79□□□□□ -1.64
SCARB2-209ENST00000638409 C1orf134Q5TEV5 83 aa4.79□□□□□ -1.64
SCARB2-209ENST00000638409 PANO1I0J062 215 aa4.78□□□□□ -1.64
SCARB2-209ENST00000638409 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
SCARB2-209ENST00000638409 RTL8CO15255 209 aa4.78□□□□□ -1.64
SCARB2-209ENST00000638409 SERP2Q8N6R1 65 aa4.78□□□□□ -1.64
SCARB2-209ENST00000638409 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
SCARB2-209ENST00000638409 BAALC-AS2P0C853 105 aa4.77□□□□□ -1.65
SCARB2-209ENST00000638409 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
SCARB2-209ENST00000638409 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
SCARB2-209ENST00000638409 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
SCARB2-209ENST00000638409 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
SCARB2-209ENST00000638409 IGKV3OR2-268A0A0C4DH90 116 aa4.76□□□□□ -1.65
SCARB2-209ENST00000638409 H3BQ85 93 aa4.76□□□□□ -1.65
SCARB2-209ENST00000638409 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
SCARB2-209ENST00000638409 Q5W150 140 aa4.75□□□□□ -1.65
SCARB2-209ENST00000638409 ENHOQ6UWT2 76 aa4.75□□□□□ -1.65
SCARB2-209ENST00000638409 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
SCARB2-209ENST00000638409 PKD1P98161 4303 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 HECTD4Q9Y4D8 3996 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 TOMM7Q9P0U1 55 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 CRPP02741 224 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
SCARB2-209ENST00000638409 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
SCARB2-209ENST00000638409 A0A1B0GVY2 172 aa4.73□□□□□ -1.65
SCARB2-209ENST00000638409 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
SCARB2-209ENST00000638409 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
SCARB2-209ENST00000638409 COPS9Q8WXC6 57 aa4.73□□□□□ -1.65
SCARB2-209ENST00000638409 LINC00269Q8N2A0 174 aa4.73□□□□□ -1.65
SCARB2-209ENST00000638409 A0A087WVE0 104 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 FP248Q71RG6 208 aaPredicted RBP4.72□□□□□ -1.65
SCARB2-209ENST00000638409 SMIM11BQ8TCY0 68 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 DIRC1Q969H9 104 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
SCARB2-209ENST00000638409 IGKV3D-7A0A0C4DH55 119 aa4.71□□□□□ -1.65
SCARB2-209ENST00000638409 LRCOL1A6NCL2 159 aa4.71□□□□□ -1.65
SCARB2-209ENST00000638409 LINC00158P58513 81 aa4.71□□□□□ -1.65
SCARB2-209ENST00000638409 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
SCARB2-209ENST00000638409 XCL1P47992 114 aa4.71□□□□□ -1.66
SCARB2-209ENST00000638409 DNAH11Q96DT5 4516 aa4.71□□□□□ -1.66
SCARB2-209ENST00000638409 A0A087WTM6 91 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 DNAL4O96015 105 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 NCR3O14931 201 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 PSCAO43653 123 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 Q8NDZ9 215 aa4.7□□□□□ -1.66
SCARB2-209ENST00000638409 LINC00959A0A1B0GUT2 108 aa4.69□□□□□ -1.66
SCARB2-209ENST00000638409 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
SCARB2-209ENST00000638409 Q6JHZ5 121 aa4.69□□□□□ -1.66
SCARB2-209ENST00000638409 CLPSL2Q6UWE3 100 aa4.68□□□□□ -1.66
SCARB2-209ENST00000638409 LINC00846Q9NV44 126 aa4.68□□□□□ -1.66
SCARB2-209ENST00000638409 Q8N814 137 aa4.68□□□□□ -1.66
SCARB2-209ENST00000638409 SS18Q15532 418 aa4.67□□□□□ -1.66
SCARB2-209ENST00000638409 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
SCARB2-209ENST00000638409 LINC00474Q9P2X8 69 aa4.67□□□□□ -1.66
SCARB2-209ENST00000638409 IGLV10-54A0A075B6I4 117 aa4.66□□□□□ -1.66
SCARB2-209ENST00000638409 RETNLBQ9BQ08 111 aa4.66□□□□□ -1.66
SCARB2-209ENST00000638409 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
SCARB2-209ENST00000638409 H7BZZ5 65 aa4.66□□□□□ -1.66
SCARB2-209ENST00000638409 OBSCN-AS1Q96MR7 158 aa4.66□□□□□ -1.66
SCARB2-209ENST00000638409 PKHD1P08F94 4074 aa4.65□□□□□ -1.66
SCARB2-209ENST00000638409 H0YGX0 51 aa4.65□□□□□ -1.67
SCARB2-209ENST00000638409 XP32Q5T750 250 aa4.65□□□□□ -1.67
SCARB2-209ENST00000638409 FUSP35637 526 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCARB2-209ENST00000638409 DNAH5Q8TE73 4624 aa4.64□□□□□ -1.67
SCARB2-209ENST00000638409 IGLV7-43P04211 117 aa4.64□□□□□ -1.67
SCARB2-209ENST00000638409 ORMDL1Q9P0S3 153 aa4.64□□□□□ -1.67
SCARB2-209ENST00000638409 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
SCARB2-209ENST00000638409 TRAV23DV6A0A075B6W5 121 aa4.63□□□□□ -1.67
SCARB2-209ENST00000638409 GVQW2A0A096LPI5 108 aaPredicted RBP4.63□□□□□ -1.67
SCARB2-209ENST00000638409 CNBPP62633 177 aaKnown RBP4.63□□□□□ -1.67
SCARB2-209ENST00000638409 CCKP06307 115 aa4.62□□□□□ -1.67
SCARB2-209ENST00000638409 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
SCARB2-209ENST00000638409 RBM3P98179 157 aaKnown RBP4.61□□□□□ -1.67
SCARB2-209ENST00000638409 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
SCARB2-209ENST00000638409 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
SCARB2-209ENST00000638409 H3BPC8 53 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 Q8IZM0 81 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 ST20-AS1Q8NBB2 130 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 LINC00167Q96N53 147 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 LRP1BQ9NZR2 4599 aa4.6□□□□□ -1.67
SCARB2-209ENST00000638409 F8WEM9 126 aa4.59□□□□□ -1.67
SCARB2-209ENST00000638409 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms