RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 TAL2Q16559 108 aa3.71□□□□□ -1.82
SCARB2-206ENST00000638175 HIGD2AQ9BW72 106 aa3.71□□□□□ -1.82
SCARB2-206ENST00000638175 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
SCARB2-206ENST00000638175 HERC1Q15751 4861 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 A6NDN8 102 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 MT1HL1P0DM35 61 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 C2orf91Q6ZV80 131 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
SCARB2-206ENST00000638175 TRBV7-6A0A0J9YX20 115 aa3.69□□□□□ -1.82
SCARB2-206ENST00000638175 A0A1B0GWB2 263 aa3.69□□□□□ -1.82
SCARB2-206ENST00000638175 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
SCARB2-206ENST00000638175 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
SCARB2-206ENST00000638175 C6orf99Q4VX62 202 aa3.69□□□□□ -1.82
SCARB2-206ENST00000638175 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
SCARB2-206ENST00000638175 A0A0B4J2C4 111 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 CRYGAP11844 174 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
SCARB2-206ENST00000638175 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 HSD52Q0P140 79 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 SPRR4Q96PI1 79 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
SCARB2-206ENST00000638175 COX7BP24311 80 aa3.67□□□□□ -1.82
SCARB2-206ENST00000638175 CEND1Q8N111 149 aa3.67□□□□□ -1.82
SCARB2-206ENST00000638175 SMIM11BQ8TCY0 68 aa3.67□□□□□ -1.82
SCARB2-206ENST00000638175 Q9BRP9 147 aa3.67□□□□□ -1.82
SCARB2-206ENST00000638175 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
SCARB2-206ENST00000638175 VAMP3Q15836 100 aa3.66□□□□□ -1.82
SCARB2-206ENST00000638175 LINC00483Q53H64 154 aa3.66□□□□□ -1.82
SCARB2-206ENST00000638175 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
SCARB2-206ENST00000638175 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
SCARB2-206ENST00000638175 LOC105371267A0A1B0GV96 52 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 SLC25A20O43772 301 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 ERC2-IT1O76042 136 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 FXYD2P54710 66 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 BVES-AS1Q5T3Y7 98 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 C12orf57Q99622 126 aa3.65□□□□□ -1.83
SCARB2-206ENST00000638175 TSTD3H0UI37 97 aa3.64□□□□□ -1.83
SCARB2-206ENST00000638175 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
SCARB2-206ENST00000638175 SPRR1BP22528 89 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 CTAG1AP78358 180 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 Q1RN00 199 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 HMCN2Q8NDA2 5059 aa3.63□□□□□ -1.83
SCARB2-206ENST00000638175 IGLV5-48A0A075B6I7 105 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 H0YGX0 51 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 H7C2G1 150 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 M0R143 59 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 SNCGO76070 127 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 LINC00304Q8N9R0 145 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 PRO1933Q9H354 126 aa3.62□□□□□ -1.83
SCARB2-206ENST00000638175 TEX49A0A1B0GTD5 131 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 hADV29S1A0JD25 119 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 LINC00575Q6W349 94 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 C3orf22Q8N5N4 141 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
SCARB2-206ENST00000638175 A0A1B0GX51 115 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 COX6CP09669 75 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 MOBPQ13875 183 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 C9orf153Q5TBE3 101 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.6□□□□□ -1.83
SCARB2-206ENST00000638175 Q6ZQY7 126 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 SSBP3-AS1Q7Z2R9 100 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 LAMTOR3Q9UHA4 124 aa3.6□□□□□ -1.83
SCARB2-206ENST00000638175 K7ERJ3 54 aa3.59□□□□□ -1.83
SCARB2-206ENST00000638175 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
SCARB2-206ENST00000638175 OCIAD2Q56VL3 154 aa3.59□□□□□ -1.83
SCARB2-206ENST00000638175 F8WEM9 126 aa3.58□□□□□ -1.84
SCARB2-206ENST00000638175 TSPAN13O95857 204 aa3.58□□□□□ -1.84
SCARB2-206ENST00000638175 SPINK1P00995 79 aa3.58□□□□□ -1.84
SCARB2-206ENST00000638175 PSMB2P49721 201 aa3.58□□□□□ -1.84
SCARB2-206ENST00000638175 DEFB105AQ8NG35 78 aa3.58□□□□□ -1.84
SCARB2-206ENST00000638175 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
SCARB2-206ENST00000638175 DNAL4O96015 105 aa3.57□□□□□ -1.84
SCARB2-206ENST00000638175 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
SCARB2-206ENST00000638175 H3BQ85 93 aa3.56□□□□□ -1.84
SCARB2-206ENST00000638175 CD164Q04900 197 aa3.55□□□□□ -1.84
SCARB2-206ENST00000638175 LYRM7Q5U5X0 104 aa3.55□□□□□ -1.84
SCARB2-206ENST00000638175 Q6JHZ5 121 aa3.55□□□□□ -1.84
SCARB2-206ENST00000638175 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
SCARB2-206ENST00000638175 IGLV8-61A0A075B6I0 122 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 LST1O00453 97 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 TRACP01848 142 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 SNHG12Q9BXW3 62 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
SCARB2-206ENST00000638175 SCGB1C2P0DMR2 95 aa3.53□□□□□ -1.84
SCARB2-206ENST00000638175 BATFQ16520 125 aa3.53□□□□□ -1.84
SCARB2-206ENST00000638175 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
SCARB2-206ENST00000638175 LRP2P98164 4655 aa3.53□□□□□ -1.84
SCARB2-206ENST00000638175 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
SCARB2-206ENST00000638175 PRR4Q16378 134 aa3.52□□□□□ -1.85
SCARB2-206ENST00000638175 Q5XG85 94 aa3.52□□□□□ -1.85
SCARB2-206ENST00000638175 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms