RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 C3orf79P0CE67 100 aa4.54□□□□□ -1.68
CLN8-214ENST00000637594 F8WEM9 126 aa4.53□□□□□ -1.68
CLN8-214ENST00000637594 VAMP3Q15836 100 aa4.53□□□□□ -1.68
CLN8-214ENST00000637594 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
CLN8-214ENST00000637594 LINC00575Q6W349 94 aa4.53□□□□□ -1.68
CLN8-214ENST00000637594 PCP2Q8IVA1 136 aa4.53□□□□□ -1.68
CLN8-214ENST00000637594 C20orf202A1L168 122 aa4.52□□□□□ -1.69
CLN8-214ENST00000637594 Q6Q795 121 aa4.52□□□□□ -1.69
CLN8-214ENST00000637594 IGFL1Q6UW32 110 aa4.52□□□□□ -1.69
CLN8-214ENST00000637594 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
CLN8-214ENST00000637594 OBSCN-AS1Q96MR7 158 aa4.52□□□□□ -1.69
CLN8-214ENST00000637594 hADV29S1A0JD25 119 aa4.51□□□□□ -1.69
CLN8-214ENST00000637594 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
CLN8-214ENST00000637594 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
CLN8-214ENST00000637594 USH2AO75445 5202 aa4.51□□□□□ -1.69
CLN8-214ENST00000637594 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
CLN8-214ENST00000637594 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
CLN8-214ENST00000637594 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
CLN8-214ENST00000637594 Q6ZQY7 126 aa4.49□□□□□ -1.69
CLN8-214ENST00000637594 A8MUU9 505 aa4.48□□□□□ -1.69
CLN8-214ENST00000637594 LST1O00453 97 aa4.48□□□□□ -1.69
CLN8-214ENST00000637594 KRTDAPP60985 99 aa4.48□□□□□ -1.69
CLN8-214ENST00000637594 SNRPEP62304 92 aaKnown RBP4.48□□□□□ -1.69
CLN8-214ENST00000637594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.48□□□□□ -1.69
CLN8-214ENST00000637594 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
CLN8-214ENST00000637594 Q96NJ1 140 aa4.48□□□□□ -1.69
CLN8-214ENST00000637594 SCGB1D1O95968 90 aa4.47□□□□□ -1.69
CLN8-214ENST00000637594 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
CLN8-214ENST00000637594 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
CLN8-214ENST00000637594 ATOH7Q8N100 152 aa4.45□□□□□ -1.7
CLN8-214ENST00000637594 SNHG12Q9BXW3 62 aa4.45□□□□□ -1.7
CLN8-214ENST00000637594 MT2AP02795 61 aa4.44□□□□□ -1.7
CLN8-214ENST00000637594 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
CLN8-214ENST00000637594 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
CLN8-214ENST00000637594 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
CLN8-214ENST00000637594 LCE2BO14633 110 aa4.42□□□□□ -1.7
CLN8-214ENST00000637594 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
CLN8-214ENST00000637594 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
CLN8-214ENST00000637594 H3BUT2 72 aa4.41□□□□□ -1.7
CLN8-214ENST00000637594 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
CLN8-214ENST00000637594 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
CLN8-214ENST00000637594 MT1FP04733 61 aa4.4□□□□□ -1.71
CLN8-214ENST00000637594 C12orf57Q99622 126 aa4.39□□□□□ -1.71
CLN8-214ENST00000637594 H0YGX0 51 aa4.38□□□□□ -1.71
CLN8-214ENST00000637594 SNCGO76070 127 aa4.38□□□□□ -1.71
CLN8-214ENST00000637594 NDUFV3P56181 108 aaKnown RBP4.38□□□□□ -1.71
CLN8-214ENST00000637594 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
CLN8-214ENST00000637594 A0A087WSZ3 146 aa4.37□□□□□ -1.71
CLN8-214ENST00000637594 LINC00313P59037 77 aa4.37□□□□□ -1.71
CLN8-214ENST00000637594 HSBP1L1C9JCN9 74 aa4.36□□□□□ -1.71
CLN8-214ENST00000637594 HRES1P13985 223 aa4.36□□□□□ -1.71
CLN8-214ENST00000637594 DSCR10P59022 87 aa4.36□□□□□ -1.71
CLN8-214ENST00000637594 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
CLN8-214ENST00000637594 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
CLN8-214ENST00000637594 A0A1B0GX51 115 aa4.35□□□□□ -1.71
CLN8-214ENST00000637594 H3BMG7 143 aa4.35□□□□□ -1.71
CLN8-214ENST00000637594 GHRHP01286 108 aa4.35□□□□□ -1.71
CLN8-214ENST00000637594 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
CLN8-214ENST00000637594 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
CLN8-214ENST00000637594 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 DLEU1O43261 78 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 HIST1H2BLQ99880 126 aa4.34□□□□□ -1.71
CLN8-214ENST00000637594 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
CLN8-214ENST00000637594 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
CLN8-214ENST00000637594 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
CLN8-214ENST00000637594 TRBV7-4A0A0J9YYF1 115 aa4.32□□□□□ -1.72
CLN8-214ENST00000637594 COX8AP10176 69 aa4.32□□□□□ -1.72
CLN8-214ENST00000637594 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
CLN8-214ENST00000637594 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
CLN8-214ENST00000637594 IGKV4-1P06312 121 aa4.31□□□□□ -1.72
CLN8-214ENST00000637594 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
CLN8-214ENST00000637594 FABP2P12104 132 aa4.3□□□□□ -1.72
CLN8-214ENST00000637594 S100A2P29034 98 aa4.3□□□□□ -1.72
CLN8-214ENST00000637594 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
CLN8-214ENST00000637594 SIGMAR1Q99720 223 aa4.3□□□□□ -1.72
CLN8-214ENST00000637594 H3BQ85 93 aa4.29□□□□□ -1.72
CLN8-214ENST00000637594 MTURNQ8N3F0 131 aa4.29□□□□□ -1.72
CLN8-214ENST00000637594 HIGD1BQ9P298 99 aa4.29□□□□□ -1.72
CLN8-214ENST00000637594 ANKRD29Q8N6D5 301 aa4.28□□□□□ -1.72
CLN8-214ENST00000637594 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
CLN8-214ENST00000637594 IGHV6-1A0A0B4J1U7 121 aa4.25□□□□□ -1.73
CLN8-214ENST00000637594 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
CLN8-214ENST00000637594 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
CLN8-214ENST00000637594 DEFB116Q30KQ4 102 aa4.25□□□□□ -1.73
CLN8-214ENST00000637594 A8MWP4 228 aa4.24□□□□□ -1.73
CLN8-214ENST00000637594 SPINK7P58062 85 aa4.24□□□□□ -1.73
CLN8-214ENST00000637594 C14orf144Q96I85 54 aa4.24□□□□□ -1.73
CLN8-214ENST00000637594 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 TRIAP1O43715 76 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 CCKP06307 115 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 S100A6P06703 90 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 C2orf91Q6ZV80 131 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 CEND1Q8N111 149 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
CLN8-214ENST00000637594 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
CLN8-214ENST00000637594 TMEM238LA0A1B0GVL6 79 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms