RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
CLN6-220ENST00000637450 F8WEM9 126 aa9.77□□□□□ -0.85
CLN6-220ENST00000637450 M0R2T5 61 aa9.75□□□□□ -0.85
CLN6-220ENST00000637450 Q6JHZ5 121 aa9.74□□□□□ -0.85
CLN6-220ENST00000637450 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
CLN6-220ENST00000637450 Q6ZQY7 126 aa9.74□□□□□ -0.85
CLN6-220ENST00000637450 hADV29S1A0JD25 119 aa9.73□□□□□ -0.85
CLN6-220ENST00000637450 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.86
CLN6-220ENST00000637450 IGFL1Q6UW32 110 aa9.71□□□□□ -0.86
CLN6-220ENST00000637450 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
CLN6-220ENST00000637450 OCIAD2Q56VL3 154 aa9.7□□□□□ -0.86
CLN6-220ENST00000637450 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
CLN6-220ENST00000637450 HSBP1L1C9JCN9 74 aa9.65□□□□□ -0.86
CLN6-220ENST00000637450 HIST3H2BBQ8N257 126 aa9.65□□□□□ -0.86
CLN6-220ENST00000637450 OBSCN-AS1Q96MR7 158 aa9.65□□□□□ -0.86
CLN6-220ENST00000637450 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
CLN6-220ENST00000637450 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
CLN6-220ENST00000637450 Q75L30 129 aa9.64□□□□□ -0.87
CLN6-220ENST00000637450 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
CLN6-220ENST00000637450 BVES-AS1Q5T3Y7 98 aa9.62□□□□□ -0.87
CLN6-220ENST00000637450 SNHG12Q9BXW3 62 aa9.62□□□□□ -0.87
CLN6-220ENST00000637450 S100A2P29034 98 aa9.61□□□□□ -0.87
CLN6-220ENST00000637450 LST1O00453 97 aa9.6□□□□□ -0.87
CLN6-220ENST00000637450 C12orf57Q99622 126 aa9.6□□□□□ -0.87
CLN6-220ENST00000637450 H3BUT2 72 aa9.58□□□□□ -0.88
CLN6-220ENST00000637450 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
CLN6-220ENST00000637450 SCGB1D1O95968 90 aa9.57□□□□□ -0.88
CLN6-220ENST00000637450 Q6Q795 121 aa9.57□□□□□ -0.88
CLN6-220ENST00000637450 Q96NJ1 140 aa9.55□□□□□ -0.88
CLN6-220ENST00000637450 COX8AP10176 69 aa9.52□□□□□ -0.89
CLN6-220ENST00000637450 SS18L2Q9UHA2 77 aa9.52□□□□□ -0.89
CLN6-220ENST00000637450 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
CLN6-220ENST00000637450 CFC1P0CG37 223 aa9.5□□□□□ -0.89
CLN6-220ENST00000637450 DLEU1O43261 78 aa9.49□□□□□ -0.89
CLN6-220ENST00000637450 S100A6P06703 90 aa9.49□□□□□ -0.89
CLN6-220ENST00000637450 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
CLN6-220ENST00000637450 A8MUU9 505 aa9.48□□□□□ -0.89
CLN6-220ENST00000637450 H0YGX0 51 aa9.48□□□□□ -0.89
CLN6-220ENST00000637450 SNCGO76070 127 aa9.48□□□□□ -0.89
CLN6-220ENST00000637450 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CLN6-220ENST00000637450 FAM218AQ96MZ4 157 aa9.47□□□□□ -0.89
CLN6-220ENST00000637450 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
CLN6-220ENST00000637450 A0A087WSZ3 146 aa9.44□□□□□ -0.9
CLN6-220ENST00000637450 USH2AO75445 5202 aa9.44□□□□□ -0.9
CLN6-220ENST00000637450 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
CLN6-220ENST00000637450 C14orf144Q96I85 54 aa9.42□□□□□ -0.9
CLN6-220ENST00000637450 HIGD1BQ9P298 99 aa9.42□□□□□ -0.9
CLN6-220ENST00000637450 H3BMG7 143 aa9.41□□□□□ -0.9
CLN6-220ENST00000637450 KRTAP9-8Q9BYQ0 159 aa9.41□□□□□ -0.9
CLN6-220ENST00000637450 SSPOA2VEC9 5147 aa9.4□□□□□ -0.9
CLN6-220ENST00000637450 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
CLN6-220ENST00000637450 A0A1B0GX51 115 aa9.39□□□□□ -0.91
CLN6-220ENST00000637450 GHRHP01286 108 aa9.38□□□□□ -0.91
CLN6-220ENST00000637450 DSCR10P59022 87 aa9.38□□□□□ -0.91
CLN6-220ENST00000637450 FABP2P12104 132 aa9.37□□□□□ -0.91
CLN6-220ENST00000637450 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
CLN6-220ENST00000637450 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
CLN6-220ENST00000637450 S100A1P23297 94 aa9.35□□□□□ -0.91
CLN6-220ENST00000637450 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
CLN6-220ENST00000637450 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
CLN6-220ENST00000637450 PRO1854Q9UHT4 67 aa9.34□□□□□ -0.91
CLN6-220ENST00000637450 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
CLN6-220ENST00000637450 CEND1Q8N111 149 aa9.33□□□□□ -0.92
CLN6-220ENST00000637450 LINC00313P59037 77 aa9.32□□□□□ -0.92
CLN6-220ENST00000637450 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
CLN6-220ENST00000637450 TRBV7-4A0A0J9YYF1 115 aa9.29□□□□□ -0.92
CLN6-220ENST00000637450 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
CLN6-220ENST00000637450 A6NJY4 79 aa9.29□□□□□ -0.92
CLN6-220ENST00000637450 TRIAP1O43715 76 aa9.29□□□□□ -0.92
CLN6-220ENST00000637450 IGKV4-1P06312 121 aa9.28□□□□□ -0.92
CLN6-220ENST00000637450 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
CLN6-220ENST00000637450 VAMP8Q9BV40 100 aa9.28□□□□□ -0.92
CLN6-220ENST00000637450 FXYD2P54710 66 aa9.27□□□□□ -0.93
CLN6-220ENST00000637450 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
CLN6-220ENST00000637450 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.24□□□□□ -0.93
CLN6-220ENST00000637450 H3BQ85 93 aa9.24□□□□□ -0.93
CLN6-220ENST00000637450 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
CLN6-220ENST00000637450 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
CLN6-220ENST00000637450 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
CLN6-220ENST00000637450 DNAL4O96015 105 aa9.23□□□□□ -0.93
CLN6-220ENST00000637450 MT2AP02795 61 aa9.23□□□□□ -0.93
CLN6-220ENST00000637450 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
CLN6-220ENST00000637450 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
CLN6-220ENST00000637450 A0A1B0GV72 72 aa9.22□□□□□ -0.93
CLN6-220ENST00000637450 HRES1P13985 223 aa9.22□□□□□ -0.93
CLN6-220ENST00000637450 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
CLN6-220ENST00000637450 TMEM256-PLSCR3K7ERE1 68 aa9.2□□□□□ -0.94
CLN6-220ENST00000637450 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
CLN6-220ENST00000637450 FCGBPQ9Y6R7 5405 aaPredicted RBP9.2□□□□□ -0.94
CLN6-220ENST00000637450 KRTAP9-7A8MTY7 169 aa9.19□□□□□ -0.94
CLN6-220ENST00000637450 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
CLN6-220ENST00000637450 CCKP06307 115 aa9.18□□□□□ -0.94
CLN6-220ENST00000637450 TRACP01848 142 aa9.17□□□□□ -0.94
CLN6-220ENST00000637450 PSMB2P49721 201 aa9.17□□□□□ -0.94
CLN6-220ENST00000637450 MT1FP04733 61 aa9.16□□□□□ -0.94
CLN6-220ENST00000637450 K7ERJ3 54 aa9.15□□□□□ -0.94
CLN6-220ENST00000637450 COX6CP09669 75 aa9.15□□□□□ -0.94
CLN6-220ENST00000637450 HSD52Q0P140 79 aa9.14□□□□□ -0.95
CLN6-220ENST00000637450 UBE2V1Q13404 147 aa9.14□□□□□ -0.95
CLN6-220ENST00000637450 LCE2BO14633 110 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms