RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 A0A096LNI7 61 aa9.16□□□□□ -0.94
CLN6-215ENST00000636674 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
CLN6-215ENST00000636674 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
CLN6-215ENST00000636674 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.94
CLN6-215ENST00000636674 PSCAO43653 123 aa9.15□□□□□ -0.94
CLN6-215ENST00000636674 FAM229BQ4G0N7 80 aa9.15□□□□□ -0.94
CLN6-215ENST00000636674 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
CLN6-215ENST00000636674 PRLHP81277 87 aa9.12□□□□□ -0.95
CLN6-215ENST00000636674 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
CLN6-215ENST00000636674 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
CLN6-215ENST00000636674 SPRR1BP22528 89 aa9.1□□□□□ -0.95
CLN6-215ENST00000636674 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
CLN6-215ENST00000636674 H0Y9J4 135 aa9.1□□□□□ -0.95
CLN6-215ENST00000636674 B9D2Q9BPU9 175 aa9.09□□□□□ -0.95
CLN6-215ENST00000636674 A0A087WSZ3 146 aa9.09□□□□□ -0.95
CLN6-215ENST00000636674 IGKV2-24A0A0C4DH68 120 aa9.09□□□□□ -0.95
CLN6-215ENST00000636674 A0A0G2JQZ4 141 aa9.09□□□□□ -0.95
CLN6-215ENST00000636674 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
CLN6-215ENST00000636674 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
CLN6-215ENST00000636674 UBE2AP49459 152 aa9.07□□□□□ -0.96
CLN6-215ENST00000636674 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
CLN6-215ENST00000636674 NDUFB1O75438 58 aa9.05□□□□□ -0.96
CLN6-215ENST00000636674 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
CLN6-215ENST00000636674 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
CLN6-215ENST00000636674 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
CLN6-215ENST00000636674 DNAH10Q8IVF4 4471 aa9.03□□□□□ -0.96
CLN6-215ENST00000636674 J3QL48 77 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 MP68P56378 58 aa9.02□□□□□ -0.97
CLN6-215ENST00000636674 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
CLN6-215ENST00000636674 PRR15Q8IV56 129 aa9□□□□□ -0.97
CLN6-215ENST00000636674 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
CLN6-215ENST00000636674 H3BPC8 53 aa9□□□□□ -0.97
CLN6-215ENST00000636674 Q1T7F1 81 aa9□□□□□ -0.97
CLN6-215ENST00000636674 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
CLN6-215ENST00000636674 APLNQ9ULZ1 77 aa9□□□□□ -0.97
CLN6-215ENST00000636674 A8MWP4 228 aa8.99□□□□□ -0.97
CLN6-215ENST00000636674 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
CLN6-215ENST00000636674 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
CLN6-215ENST00000636674 DYNC2H1Q8NCM8 4307 aaKnown RBP8.99□□□□□ -0.97
CLN6-215ENST00000636674 RPL37AP61513 92 aaKnown RBP8.98□□□□□ -0.97
CLN6-215ENST00000636674 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
CLN6-215ENST00000636674 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
CLN6-215ENST00000636674 STAB2Q8WWQ8 2551 aa8.96□□□□□ -0.97
CLN6-215ENST00000636674 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
CLN6-215ENST00000636674 BRK1Q8WUW1 75 aa8.96□□□□□ -0.98
CLN6-215ENST00000636674 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
CLN6-215ENST00000636674 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
CLN6-215ENST00000636674 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
CLN6-215ENST00000636674 H0Y9P7 68 aa8.93□□□□□ -0.98
CLN6-215ENST00000636674 WWC2-AS2Q96NR7 200 aa8.92□□□□□ -0.98
CLN6-215ENST00000636674 LYSTQ99698 3801 aa8.91□□□□□ -0.98
CLN6-215ENST00000636674 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
CLN6-215ENST00000636674 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.99
CLN6-215ENST00000636674 PRR4Q16378 134 aa8.89□□□□□ -0.99
CLN6-215ENST00000636674 V9GYY9 64 aa8.89□□□□□ -0.99
CLN6-215ENST00000636674 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
CLN6-215ENST00000636674 NBDYA0A0U1RRE5 68 aa8.88□□□□□ -0.99
CLN6-215ENST00000636674 PANO1I0J062 215 aa8.86□□□□□ -0.99
CLN6-215ENST00000636674 SEC61GP60059 68 aa8.86□□□□□ -0.99
CLN6-215ENST00000636674 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
CLN6-215ENST00000636674 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
CLN6-215ENST00000636674 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
CLN6-215ENST00000636674 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
CLN6-215ENST00000636674 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
CLN6-215ENST00000636674 Q96NJ1 140 aa8.85□□□□□ -0.99
CLN6-215ENST00000636674 MOBPQ13875 183 aa8.83□□□□□ -1
CLN6-215ENST00000636674 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
CLN6-215ENST00000636674 NUPR2A6NF83 97 aa8.8□□□□□ -1
CLN6-215ENST00000636674 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
CLN6-215ENST00000636674 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
CLN6-215ENST00000636674 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
CLN6-215ENST00000636674 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
CLN6-215ENST00000636674 PSPHP1O15172 72 aa8.78□□□□□ -1
CLN6-215ENST00000636674 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
CLN6-215ENST00000636674 IGLV9-49A0A0B4J1Y8 123 aa8.77□□□□□ -1.01
CLN6-215ENST00000636674 PLECQ15149 4684 aaKnown RBP8.77□□□□□ -1.01
CLN6-215ENST00000636674 Q6ZR54 194 aa8.76□□□□□ -1.01
CLN6-215ENST00000636674 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
CLN6-215ENST00000636674 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
CLN6-215ENST00000636674 A8MUN3 132 aa8.75□□□□□ -1.01
CLN6-215ENST00000636674 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
CLN6-215ENST00000636674 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
CLN6-215ENST00000636674 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
CLN6-215ENST00000636674 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
CLN6-215ENST00000636674 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
CLN6-215ENST00000636674 Q5VV11 94 aa8.73□□□□□ -1.01
CLN6-215ENST00000636674 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
CLN6-215ENST00000636674 A0A087WTM6 91 aa8.73□□□□□ -1.01
CLN6-215ENST00000636674 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
CLN6-215ENST00000636674 COA5Q86WW8 74 aa8.71□□□□□ -1.02
CLN6-215ENST00000636674 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
CLN6-215ENST00000636674 CD164Q04900 197 aa8.69□□□□□ -1.02
CLN6-215ENST00000636674 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
CLN6-215ENST00000636674 RYR3Q15413 4870 aa8.68□□□□□ -1.02
CLN6-215ENST00000636674 ZNF861PO60384 105 aa8.68□□□□□ -1.02
CLN6-215ENST00000636674 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms