RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 DNAH8Q96JB1 4490 aa12.53□□□□□ -0.4
CLN8-208ENST00000635751 SERP2Q8N6R1 65 aa12.52□□□□□ -0.41
CLN8-208ENST00000635751 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.41
CLN8-208ENST00000635751 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
CLN8-208ENST00000635751 A0A1W2PNN7 141 aa12.51□□□□□ -0.41
CLN8-208ENST00000635751 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
CLN8-208ENST00000635751 IGLV5-48A0A075B6I7 105 aa12.49□□□□□ -0.41
CLN8-208ENST00000635751 REG3GQ6UW15 175 aa12.48□□□□□ -0.41
CLN8-208ENST00000635751 CRYGAP11844 174 aa12.48□□□□□ -0.41
CLN8-208ENST00000635751 LRP1BQ9NZR2 4599 aa12.47□□□□□ -0.41
CLN8-208ENST00000635751 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
CLN8-208ENST00000635751 UBE2BP63146 152 aa12.45□□□□□ -0.42
CLN8-208ENST00000635751 Q6ZSA8 131 aa12.44□□□□□ -0.42
CLN8-208ENST00000635751 ST20-AS1Q8NBB2 130 aa12.44□□□□□ -0.42
CLN8-208ENST00000635751 BCE1O60756 84 aa12.41□□□□□ -0.42
CLN8-208ENST00000635751 ERC2-IT1O76042 136 aa12.41□□□□□ -0.42
CLN8-208ENST00000635751 A0A1B0GW54 56 aa12.4□□□□□ -0.42
CLN8-208ENST00000635751 SCXQ7RTU7 201 aa12.4□□□□□ -0.42
CLN8-208ENST00000635751 PLAC8Q9NZF1 115 aa12.4□□□□□ -0.42
CLN8-208ENST00000635751 NREPQ16612 68 aa12.39□□□□□ -0.43
CLN8-208ENST00000635751 PHF5AQ7RTV0 110 aaKnown RBP12.39□□□□□ -0.43
CLN8-208ENST00000635751 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
CLN8-208ENST00000635751 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
CLN8-208ENST00000635751 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
CLN8-208ENST00000635751 SMIM20Q8N5G0 67 aa12.35□□□□□ -0.43
CLN8-208ENST00000635751 A0A1W2PNM2 257 aa12.34□□□□□ -0.43
CLN8-208ENST00000635751 EPPK1P58107 5090 aaKnown RBP12.34□□□□□ -0.43
CLN8-208ENST00000635751 Q8NBF4 154 aa12.33□□□□□ -0.44
CLN8-208ENST00000635751 TRAV7A0A075B6U4 112 aa12.32□□□□□ -0.44
CLN8-208ENST00000635751 APOBP04114 4563 aaKnown RBP12.31□□□□□ -0.44
CLN8-208ENST00000635751 PRLHP81277 87 aa12.31□□□□□ -0.44
CLN8-208ENST00000635751 SMIM29Q86T20 159 aa12.31□□□□□ -0.44
CLN8-208ENST00000635751 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
CLN8-208ENST00000635751 CYSTM1Q9H1C7 97 aa12.31□□□□□ -0.44
CLN8-208ENST00000635751 F8WEM9 126 aa12.3□□□□□ -0.44
CLN8-208ENST00000635751 BPY2O14599 106 aa12.3□□□□□ -0.44
CLN8-208ENST00000635751 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
CLN8-208ENST00000635751 IGKV4-1P06312 121 aa12.28□□□□□ -0.44
CLN8-208ENST00000635751 HIGD2AQ9BW72 106 aa12.26□□□□□ -0.45
CLN8-208ENST00000635751 H0Y9J4 135 aa12.25□□□□□ -0.45
CLN8-208ENST00000635751 TMEM258P61165 79 aa12.25□□□□□ -0.45
CLN8-208ENST00000635751 Q8N9L7 120 aa12.25□□□□□ -0.45
CLN8-208ENST00000635751 C20orf197Q8N268 126 aa12.23□□□□□ -0.45
CLN8-208ENST00000635751 IGLV8-61A0A075B6I0 122 aa12.22□□□□□ -0.45
CLN8-208ENST00000635751 PSORS1C2Q9UIG4 136 aa12.21□□□□□ -0.46
CLN8-208ENST00000635751 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
CLN8-208ENST00000635751 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
CLN8-208ENST00000635751 UBE2AP49459 152 aa12.18□□□□□ -0.46
CLN8-208ENST00000635751 SPRR1BP22528 89 aa12.17□□□□□ -0.46
CLN8-208ENST00000635751 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
CLN8-208ENST00000635751 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
CLN8-208ENST00000635751 VPS13BQ7Z7G8 4022 aa12.15□□□□□ -0.47
CLN8-208ENST00000635751 HSPG2P98160 4391 aa12.12□□□□□ -0.47
CLN8-208ENST00000635751 A0A0G2JQZ4 141 aa12.12□□□□□ -0.47
CLN8-208ENST00000635751 J3KT08 172 aa12.12□□□□□ -0.47
CLN8-208ENST00000635751 FAT1Q14517 4588 aa12.11□□□□□ -0.47
CLN8-208ENST00000635751 DSCR10P59022 87 aa12.11□□□□□ -0.47
CLN8-208ENST00000635751 RPS28P62857 69 aaKnown RBP12.1□□□□□ -0.47
CLN8-208ENST00000635751 RYR1P21817 5038 aa12.1□□□□□ -0.47
CLN8-208ENST00000635751 KRTAP13-1Q8IUC0 172 aa12.09□□□□□ -0.47
CLN8-208ENST00000635751 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
CLN8-208ENST00000635751 OCR1Q9BZK8 76 aa12.09□□□□□ -0.47
CLN8-208ENST00000635751 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
CLN8-208ENST00000635751 SNURFQ9Y675 71 aa12.07□□□□□ -0.48
CLN8-208ENST00000635751 H7BZZ5 65 aa12.07□□□□□ -0.48
CLN8-208ENST00000635751 A0A087WSZ3 146 aa12.06□□□□□ -0.48
CLN8-208ENST00000635751 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
CLN8-208ENST00000635751 SRRM2Q9UQ35 2752 aaKnown RBP12.06□□□□□ -0.48
CLN8-208ENST00000635751 K7EQZ3 153 aa12.05□□□□□ -0.48
CLN8-208ENST00000635751 NDUFC1O43677 76 aa12.03□□□□□ -0.48
CLN8-208ENST00000635751 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
CLN8-208ENST00000635751 FAM236DA0A1B0GTK5 79 aa12.02□□□□□ -0.48
CLN8-208ENST00000635751 ZNF861PO60384 105 aa12.02□□□□□ -0.48
CLN8-208ENST00000635751 FAM236CP0DP71 79 aa12.02□□□□□ -0.48
CLN8-208ENST00000635751 FAM229AH3BQW9 127 aa12□□□□□ -0.49
CLN8-208ENST00000635751 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
CLN8-208ENST00000635751 KRTAP17-1Q9BYP8 105 aa11.99□□□□□ -0.49
CLN8-208ENST00000635751 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
CLN8-208ENST00000635751 BIRC6Q9NR09 4857 aa11.97□□□□□ -0.49
CLN8-208ENST00000635751 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
CLN8-208ENST00000635751 Q5VSD8 79 aa11.96□□□□□ -0.49
CLN8-208ENST00000635751 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
CLN8-208ENST00000635751 PLA2G1BP04054 148 aaKnown RBP11.95□□□□□ -0.5
CLN8-208ENST00000635751 LINC00483Q53H64 154 aa11.93□□□□□ -0.5
CLN8-208ENST00000635751 Q8N1X5 172 aa11.93□□□□□ -0.5
CLN8-208ENST00000635751 ZNF706Q9Y5V0 76 aaPredicted RBP11.93□□□□□ -0.5
CLN8-208ENST00000635751 LINC00472Q9H8W2 130 aa11.9□□□□□ -0.5
CLN8-208ENST00000635751 OXTP01178 125 aa11.89□□□□□ -0.51
CLN8-208ENST00000635751 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
CLN8-208ENST00000635751 IGLV9-49A0A0B4J1Y8 123 aa11.88□□□□□ -0.51
CLN8-208ENST00000635751 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
CLN8-208ENST00000635751 SERP1Q9Y6X1 66 aa11.88□□□□□ -0.51
CLN8-208ENST00000635751 A8MWP4 228 aa11.86□□□□□ -0.51
CLN8-208ENST00000635751 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
CLN8-208ENST00000635751 PRR15Q8IV56 129 aa11.85□□□□□ -0.51
CLN8-208ENST00000635751 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
CLN8-208ENST00000635751 C5orf47Q569G3 176 aa11.83□□□□□ -0.51
CLN8-208ENST00000635751 ANAPC11Q9NYG5 84 aa11.82□□□□□ -0.52
CLN8-208ENST00000635751 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
CLN8-208ENST00000635751 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms