RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	TRAV7	A0A075B6U4	112 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	ZNF727	A8MUV8	499 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	PPP1R17	O96001	155 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	CKS2	P33552	79 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TPRXL	Q17RH7	258 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TIMM21	Q9BVV7	248 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273	OSTC	Q9NRP0	149 aa		2.85	□□□□□ -1.95
SMARCA2-238	ENST00000635273		A0A1B0GX51	115 aa		2.84	□□□□□ -1.95
SMARCA2-238	ENST00000635273		J3QQQ9	107 aa		2.84	□□□□□ -1.95
SMARCA2-238	ENST00000635273		V9GYV3	84 aa		2.84	□□□□□ -1.95
SMARCA2-238	ENST00000635273		D6R8Y8	96 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273		H7C2G1	150 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	NDUFC2	O95298	119 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H4A	P62805	103 aa	Known RBP	2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HBB	P68871	147 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	MRPL54	Q6P161	138 aa	Known RBP	2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273		Q8NDZ9	215 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	RETNLB	Q9BQ08	111 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	C20orf78	Q9BR46	151 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TOMM7	Q9P0U1	55 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TP73-AS1	Q9UF72	201 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	LAMTOR3	Q9UHA4	124 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	NAT8B	Q9UHF3	227 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	C22orf24	Q9Y442	160 aa		2.83	□□□□□ -1.96
SMARCA2-238	ENST00000635273	MUC2	Q02817	5179 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273		J3KT08	172 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BO	P23527	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BB	P33778	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	IFI27	P40305	119 aa	Predicted RBP	2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BD	P58876	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TMEM258	P61165	79 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BC	P62807	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	MRPS36	P82909	103 aa	Known RBP	2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	ADIRF	Q15847	76 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST2H2BE	Q16778	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TCTE3	Q8IZS6	198 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BH	Q93079	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	PLEKHB2	Q96CS7	222 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BN	Q99877	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HIST1H2BM	Q99879	126 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	SMIM2	Q9BVW6	85 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	SS18L2	Q9UHA2	77 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	MUC19	Q7Z5P9	8384 aa		2.82	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TRBV30	A0A0K0K1B3	111 aa		2.81	□□□□□ -1.96
SMARCA2-238	ENST00000635273	SMIM27	A0A1W2PRY6	76 aa		2.81	□□□□□ -1.96
SMARCA2-238	ENST00000635273	C14orf144	Q96I85	54 aa		2.81	□□□□□ -1.96
SMARCA2-238	ENST00000635273	HSPB8	Q9UJY1	196 aa		2.81	□□□□□ -1.96
SMARCA2-238	ENST00000635273		A0A1B0GVG6	124 aa		2.8	□□□□□ -1.96
SMARCA2-238	ENST00000635273	CRYGA	P11844	174 aa		2.8	□□□□□ -1.96
SMARCA2-238	ENST00000635273	KTN1-AS1	Q86SY8	53 aa		2.8	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TMEM141	Q96I45	108 aa		2.8	□□□□□ -1.96
SMARCA2-238	ENST00000635273	PRELID3A	Q96N28	172 aa		2.8	□□□□□ -1.96
SMARCA2-238	ENST00000635273	NUPR1	O60356	82 aa		2.79	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TOMM6	Q96B49	74 aa		2.79	□□□□□ -1.96
SMARCA2-238	ENST00000635273	CDKN2A-AS1	Q9UH64	79 aa		2.79	□□□□□ -1.96
SMARCA2-238	ENST00000635273	TRAV9-1	A0A075B6T8	112 aa		2.78	□□□□□ -1.96
SMARCA2-238	ENST00000635273	BCE1	O60756	84 aa		2.78	□□□□□ -1.96
SMARCA2-238	ENST00000635273	CYSLTR1	Q9Y271	337 aa		2.78	□□□□□ -1.96
SMARCA2-238	ENST00000635273	LAMTOR2	Q9Y2Q5	125 aa		2.78	□□□□□ -1.96
SMARCA2-238	ENST00000635273	IGKV2D-26	A0A0A0MRZ7	120 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273	C20orf202	A1L168	122 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273	IGIP	A6NJ69	53 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273		F8VRH5	84 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273	PEA15	Q15121	130 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273		Q8IZM0	81 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273		Q8N8P6	123 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273	AMELX	Q99217	191 aa		2.77	□□□□□ -1.97
SMARCA2-238	ENST00000635273	PRLH	P81277	87 aa		2.76	□□□□□ -1.97
SMARCA2-238	ENST00000635273	ERG28	Q9UKR5	140 aa		2.76	□□□□□ -1.97
SMARCA2-238	ENST00000635273	TRBV10-2	A0A0K0K1G8	114 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	SPINK8	P0C7L1	97 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	ADCYAP1	P18509	176 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	AKR1D1	P51857	326 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	KRTAP12-3	P60328	96 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	SEC11A	P67812	179 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	OCIAD2	Q56VL3	154 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	COX7B2	Q8TF08	81 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	SCGB3A1	Q96QR1	104 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273	FAT4	Q6V0I7	4981 aa		2.75	□□□□□ -1.97
SMARCA2-238	ENST00000635273		J3QR89	54 aa		2.74	□□□□□ -1.97
SMARCA2-238	ENST00000635273	SPANXD	Q9BXN6	97 aa		2.74	□□□□□ -1.97
SMARCA2-238	ENST00000635273	IMUP	Q9GZP8	106 aa		2.74	□□□□□ -1.97
SMARCA2-238	ENST00000635273	MT-ND4L	P03901	98 aa		2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273	NDUFA6	P56556	154 aa		2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273	RHEB	Q15382	184 aa		2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273	ZNF625	Q96I27	306 aa	Predicted RBP	2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273	CST9L	Q9H4G1	147 aa		2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273	NXT2	Q9NPJ8	142 aa	Known RBP	2.73	□□□□□ -1.97
SMARCA2-238	ENST00000635273		K7EMI3	77 aa		2.72	□□□□□ -1.97
SMARCA2-238	ENST00000635273		M0R143	59 aa		2.72	□□□□□ -1.97
SMARCA2-238	ENST00000635273	FXYD2	P54710	66 aa		2.72	□□□□□ -1.97
SMARCA2-238	ENST00000635273	PCOTH	Q58A44	107 aa		2.72	□□□□□ -1.97
SMARCA2-238	ENST00000635273		C9JAW5	83 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273		H3BRM9	83 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273		M0R378	163 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273	DPM2	O94777	84 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273	LYRM7	Q5U5X0	104 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273	KRTAP4-1	Q9BYQ7	146 aa		2.71	□□□□□ -1.98
SMARCA2-238	ENST00000635273	LINC00158	P58513	81 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms