RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
LINC00339-208ENST00000634934 C9orf153Q5TBE3 101 aa9□□□□□ -0.97
LINC00339-208ENST00000634934 SERP2Q8N6R1 65 aa9□□□□□ -0.97
LINC00339-208ENST00000634934 SVIPQ8NHG7 77 aa9□□□□□ -0.97
LINC00339-208ENST00000634934 KRTAP4-5Q9BYR2 181 aa9□□□□□ -0.97
LINC00339-208ENST00000634934 UBL5Q9BZL1 73 aa9□□□□□ -0.97
LINC00339-208ENST00000634934 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
LINC00339-208ENST00000634934 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
LINC00339-208ENST00000634934 DIRC1Q969H9 104 aa8.99□□□□□ -0.97
LINC00339-208ENST00000634934 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
LINC00339-208ENST00000634934 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
LINC00339-208ENST00000634934 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
LINC00339-208ENST00000634934 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
LINC00339-208ENST00000634934 Q8N1X5 172 aa8.96□□□□□ -0.97
LINC00339-208ENST00000634934 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-208ENST00000634934 PCLOQ9Y6V0 5065 aa8.95□□□□□ -0.98
LINC00339-208ENST00000634934 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
LINC00339-208ENST00000634934 CXCL6P80162 114 aa8.95□□□□□ -0.98
LINC00339-208ENST00000634934 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
LINC00339-208ENST00000634934 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
LINC00339-208ENST00000634934 COX7BP24311 80 aa8.94□□□□□ -0.98
LINC00339-208ENST00000634934 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
LINC00339-208ENST00000634934 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
LINC00339-208ENST00000634934 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
LINC00339-208ENST00000634934 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
LINC00339-208ENST00000634934 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
LINC00339-208ENST00000634934 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
LINC00339-208ENST00000634934 Q6ZQY7 126 aa8.92□□□□□ -0.98
LINC00339-208ENST00000634934 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
LINC00339-208ENST00000634934 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
LINC00339-208ENST00000634934 PRYO14603 147 aa8.91□□□□□ -0.98
LINC00339-208ENST00000634934 TMEM258P61165 79 aa8.91□□□□□ -0.98
LINC00339-208ENST00000634934 Q5VSD8 79 aa8.9□□□□□ -0.98
LINC00339-208ENST00000634934 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
LINC00339-208ENST00000634934 A0A1B0GW54 56 aa8.9□□□□□ -0.99
LINC00339-208ENST00000634934 SRRM2Q9UQ35 2752 aaKnown RBP8.89□□□□□ -0.99
LINC00339-208ENST00000634934 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
LINC00339-208ENST00000634934 A0A087WVE0 104 aa8.87□□□□□ -0.99
LINC00339-208ENST00000634934 ETDCA0A1B0GVM5 59 aa8.87□□□□□ -0.99
LINC00339-208ENST00000634934 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
LINC00339-208ENST00000634934 FAM19A1Q7Z5A9 133 aa8.87□□□□□ -0.99
LINC00339-208ENST00000634934 SPRR1AP35321 89 aa8.86□□□□□ -0.99
LINC00339-208ENST00000634934 UBE2AP49459 152 aa8.86□□□□□ -0.99
LINC00339-208ENST00000634934 Q6ZVQ6 151 aa8.86□□□□□ -0.99
LINC00339-208ENST00000634934 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
LINC00339-208ENST00000634934 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
LINC00339-208ENST00000634934 PRLHP81277 87 aa8.85□□□□□ -0.99
LINC00339-208ENST00000634934 J3KT08 172 aa8.84□□□□□ -0.99
LINC00339-208ENST00000634934 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
LINC00339-208ENST00000634934 KRTAP4-16G5E9R7 235 aaPredicted RBP8.83□□□□□ -1
LINC00339-208ENST00000634934 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
LINC00339-208ENST00000634934 ZNF861PO60384 105 aa8.81□□□□□ -1
LINC00339-208ENST00000634934 Q6ZRX8 168 aa8.8□□□□□ -1
LINC00339-208ENST00000634934 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
LINC00339-208ENST00000634934 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
LINC00339-208ENST00000634934 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
LINC00339-208ENST00000634934 DHRS4-AS1Q9P1J3 65 aa8.8□□□□□ -1
LINC00339-208ENST00000634934 H0Y9J4 135 aa8.79□□□□□ -1
LINC00339-208ENST00000634934 MYCBP2O75592 4640 aa8.77□□□□□ -1
LINC00339-208ENST00000634934 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
LINC00339-208ENST00000634934 KLKP1Q107X0 134 aa8.77□□□□□ -1.01
LINC00339-208ENST00000634934 Q9BRP9 147 aa8.76□□□□□ -1.01
LINC00339-208ENST00000634934 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
LINC00339-208ENST00000634934 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
LINC00339-208ENST00000634934 NDUFC1O43677 76 aa8.73□□□□□ -1.01
LINC00339-208ENST00000634934 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
LINC00339-208ENST00000634934 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
LINC00339-208ENST00000634934 Q8N377 158 aa8.7□□□□□ -1.02
LINC00339-208ENST00000634934 LRP1Q07954 4544 aaKnown RBP8.69□□□□□ -1.02
LINC00339-208ENST00000634934 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
LINC00339-208ENST00000634934 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
LINC00339-208ENST00000634934 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
LINC00339-208ENST00000634934 H7BZZ5 65 aa8.67□□□□□ -1.02
LINC00339-208ENST00000634934 NREPQ16612 68 aa8.67□□□□□ -1.02
LINC00339-208ENST00000634934 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
LINC00339-208ENST00000634934 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
LINC00339-208ENST00000634934 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
LINC00339-208ENST00000634934 IGKV4-1P06312 121 aa8.65□□□□□ -1.02
LINC00339-208ENST00000634934 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
LINC00339-208ENST00000634934 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
LINC00339-208ENST00000634934 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
LINC00339-208ENST00000634934 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
LINC00339-208ENST00000634934 Q8NBF4 154 aa8.64□□□□□ -1.03
LINC00339-208ENST00000634934 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
LINC00339-208ENST00000634934 BPY2O14599 106 aa8.62□□□□□ -1.03
LINC00339-208ENST00000634934 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
LINC00339-208ENST00000634934 OCR1Q9BZK8 76 aa8.61□□□□□ -1.03
LINC00339-208ENST00000634934 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
LINC00339-208ENST00000634934 A0A1W2PNM2 257 aa8.59□□□□□ -1.03
LINC00339-208ENST00000634934 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
LINC00339-208ENST00000634934 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
LINC00339-208ENST00000634934 SPRR1BP22528 89 aa8.57□□□□□ -1.04
LINC00339-208ENST00000634934 PRR26Q8N8Z3 221 aa8.57□□□□□ -1.04
LINC00339-208ENST00000634934 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-208ENST00000634934 HERC1Q15751 4861 aa8.57□□□□□ -1.04
LINC00339-208ENST00000634934 A0A087X002 238 aa8.56□□□□□ -1.04
LINC00339-208ENST00000634934 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
LINC00339-208ENST00000634934 OXTP01178 125 aa8.55□□□□□ -1.04
LINC00339-208ENST00000634934 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
LINC00339-208ENST00000634934 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms