RNA–Protein interactions for RNA: ENST00000629552.2

SOX2-OT-252, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 572 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-252ENST00000629552 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
SOX2-OT-252ENST00000629552 HIST1H4GQ99525 98 aa7.5□□□□□ -1.21
SOX2-OT-252ENST00000629552 CD164Q04900 197 aa7.49□□□□□ -1.21
SOX2-OT-252ENST00000629552 C1orf195Q5TG92 126 aa7.49□□□□□ -1.21
SOX2-OT-252ENST00000629552 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
SOX2-OT-252ENST00000629552 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
SOX2-OT-252ENST00000629552 PAM16Q9Y3D7 125 aa7.47□□□□□ -1.21
SOX2-OT-252ENST00000629552 hADV29S1A0JD25 119 aa7.46□□□□□ -1.22
SOX2-OT-252ENST00000629552 A6NJY4 79 aa7.46□□□□□ -1.22
SOX2-OT-252ENST00000629552 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
SOX2-OT-252ENST00000629552 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
SOX2-OT-252ENST00000629552 VAMP3Q15836 100 aa7.45□□□□□ -1.22
SOX2-OT-252ENST00000629552 C2orf91Q6ZV80 131 aa7.45□□□□□ -1.22
SOX2-OT-252ENST00000629552 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
SOX2-OT-252ENST00000629552 CFC1P0CG37 223 aa7.44□□□□□ -1.22
SOX2-OT-252ENST00000629552 SPATA45Q537H7 98 aa7.44□□□□□ -1.22
SOX2-OT-252ENST00000629552 Q5XG85 94 aa7.44□□□□□ -1.22
SOX2-OT-252ENST00000629552 DLEU1O43261 78 aa7.43□□□□□ -1.22
SOX2-OT-252ENST00000629552 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
SOX2-OT-252ENST00000629552 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
SOX2-OT-252ENST00000629552 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
SOX2-OT-252ENST00000629552 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
SOX2-OT-252ENST00000629552 F8WEM9 126 aa7.41□□□□□ -1.22
SOX2-OT-252ENST00000629552 H3BUT2 72 aa7.41□□□□□ -1.22
SOX2-OT-252ENST00000629552 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.22
SOX2-OT-252ENST00000629552 VAMP8Q9BV40 100 aa7.4□□□□□ -1.22
SOX2-OT-252ENST00000629552 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
SOX2-OT-252ENST00000629552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.39□□□□□ -1.23
SOX2-OT-252ENST00000629552 BVES-AS1Q5T3Y7 98 aa7.38□□□□□ -1.23
SOX2-OT-252ENST00000629552 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
SOX2-OT-252ENST00000629552 HIGD1BQ9P298 99 aa7.38□□□□□ -1.23
SOX2-OT-252ENST00000629552 TRBV7-7A0A0K0K1E9 115 aa7.37□□□□□ -1.23
SOX2-OT-252ENST00000629552 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
SOX2-OT-252ENST00000629552 FXYD2P54710 66 aa7.36□□□□□ -1.23
SOX2-OT-252ENST00000629552 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
SOX2-OT-252ENST00000629552 TCL1BO95988 128 aa7.35□□□□□ -1.23
SOX2-OT-252ENST00000629552 Q6JHZ5 121 aa7.35□□□□□ -1.23
SOX2-OT-252ENST00000629552 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
SOX2-OT-252ENST00000629552 CEND1Q8N111 149 aa7.34□□□□□ -1.23
SOX2-OT-252ENST00000629552 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.23
SOX2-OT-252ENST00000629552 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
SOX2-OT-252ENST00000629552 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
SOX2-OT-252ENST00000629552 C21orf62-AS1Q17RA5 79 aa7.32□□□□□ -1.24
SOX2-OT-252ENST00000629552 K7ERJ3 54 aa7.31□□□□□ -1.24
SOX2-OT-252ENST00000629552 MT1HP80294 61 aa7.31□□□□□ -1.24
SOX2-OT-252ENST00000629552 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
SOX2-OT-252ENST00000629552 TRIAP1O43715 76 aa7.3□□□□□ -1.24
SOX2-OT-252ENST00000629552 PPDPFLQ8WWR9 84 aa7.3□□□□□ -1.24
SOX2-OT-252ENST00000629552 NDUFV3P56181 108 aaKnown RBP7.29□□□□□ -1.24
SOX2-OT-252ENST00000629552 OBSCN-AS1Q96MR7 158 aa7.29□□□□□ -1.24
SOX2-OT-252ENST00000629552 PRO1854Q9UHT4 67 aa7.29□□□□□ -1.24
SOX2-OT-252ENST00000629552 H0YGX0 51 aa7.27□□□□□ -1.25
SOX2-OT-252ENST00000629552 A0A1B0GV72 72 aa7.26□□□□□ -1.25
SOX2-OT-252ENST00000629552 TMEM238LA0A1B0GVL6 79 aa7.25□□□□□ -1.25
SOX2-OT-252ENST00000629552 FABP2P12104 132 aa7.25□□□□□ -1.25
SOX2-OT-252ENST00000629552 A0A087WSZ3 146 aa7.24□□□□□ -1.25
SOX2-OT-252ENST00000629552 H3BMG7 143 aa7.24□□□□□ -1.25
SOX2-OT-252ENST00000629552 LST1O00453 97 aa7.24□□□□□ -1.25
SOX2-OT-252ENST00000629552 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
SOX2-OT-252ENST00000629552 HSD52Q0P140 79 aa7.23□□□□□ -1.25
SOX2-OT-252ENST00000629552 Q6Q795 121 aa7.23□□□□□ -1.25
SOX2-OT-252ENST00000629552 Q96NJ1 140 aa7.23□□□□□ -1.25
SOX2-OT-252ENST00000629552 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
SOX2-OT-252ENST00000629552 A0A1B0GX51 115 aa7.19□□□□□ -1.26
SOX2-OT-252ENST00000629552 PSMB2P49721 201 aa7.19□□□□□ -1.26
SOX2-OT-252ENST00000629552 SNCGO76070 127 aa7.18□□□□□ -1.26
SOX2-OT-252ENST00000629552 Q75L30 129 aa7.18□□□□□ -1.26
SOX2-OT-252ENST00000629552 SS18L2Q9UHA2 77 aa7.17□□□□□ -1.26
SOX2-OT-252ENST00000629552 DSCR10P59022 87 aa7.16□□□□□ -1.26
SOX2-OT-252ENST00000629552 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-252ENST00000629552 UQCR10Q9UDW1 63 aa7.16□□□□□ -1.26
SOX2-OT-252ENST00000629552 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.26
SOX2-OT-252ENST00000629552 ORMDL1Q9P0S3 153 aa7.15□□□□□ -1.26
SOX2-OT-252ENST00000629552 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 DNAL4O96015 105 aa7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 DEFB116Q30KQ4 102 aa7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 SIGMAR1Q99720 223 aa7.13□□□□□ -1.27
SOX2-OT-252ENST00000629552 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
SOX2-OT-252ENST00000629552 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
SOX2-OT-252ENST00000629552 A8MUU9 505 aa7.11□□□□□ -1.27
SOX2-OT-252ENST00000629552 M0R2T5 61 aa7.11□□□□□ -1.27
SOX2-OT-252ENST00000629552 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
SOX2-OT-252ENST00000629552 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
SOX2-OT-252ENST00000629552 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
SOX2-OT-252ENST00000629552 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
SOX2-OT-252ENST00000629552 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 GHRHP01286 108 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 CCKP06307 115 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 IGKV4-1P06312 121 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 COX6CP09669 75 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
SOX2-OT-252ENST00000629552 TMEM256-PLSCR3K7ERE1 68 aa7.07□□□□□ -1.28
SOX2-OT-252ENST00000629552 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
SOX2-OT-252ENST00000629552 TRACP01848 142 aa7.05□□□□□ -1.28
SOX2-OT-252ENST00000629552 SCGB1C2P0DMR2 95 aa7.05□□□□□ -1.28
SOX2-OT-252ENST00000629552 VPS25Q9BRG1 176 aa7.05□□□□□ -1.28
SOX2-OT-252ENST00000629552 UBE2V1Q13404 147 aa7.04□□□□□ -1.28
SOX2-OT-252ENST00000629552 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms