RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
SPTAN1-217ENST00000629089 CRYGAP11844 174 aa10.5□□□□□ -0.73
SPTAN1-217ENST00000629089 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
SPTAN1-217ENST00000629089 A0A087X002 238 aa10.49□□□□□ -0.73
SPTAN1-217ENST00000629089 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
SPTAN1-217ENST00000629089 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
SPTAN1-217ENST00000629089 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
SPTAN1-217ENST00000629089 MTURNQ8N3F0 131 aa10.47□□□□□ -0.73
SPTAN1-217ENST00000629089 PRR26Q8N8Z3 221 aa10.47□□□□□ -0.73
SPTAN1-217ENST00000629089 F8WEM9 126 aa10.46□□□□□ -0.74
SPTAN1-217ENST00000629089 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.74
SPTAN1-217ENST00000629089 LINC01600Q96MT4 127 aa10.46□□□□□ -0.74
SPTAN1-217ENST00000629089 A0A1B0GV90 55 aa10.45□□□□□ -0.74
SPTAN1-217ENST00000629089 NDUFV3P56181 108 aaKnown RBP10.44□□□□□ -0.74
SPTAN1-217ENST00000629089 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
SPTAN1-217ENST00000629089 MOBPQ13875 183 aa10.43□□□□□ -0.74
SPTAN1-217ENST00000629089 KRTAP13-2Q52LG2 175 aa10.43□□□□□ -0.74
SPTAN1-217ENST00000629089 TYMSOSQ8TAI1 123 aa10.43□□□□□ -0.74
SPTAN1-217ENST00000629089 H3BT86 120 aa10.42□□□□□ -0.74
SPTAN1-217ENST00000629089 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
SPTAN1-217ENST00000629089 OXTP01178 125 aa10.41□□□□□ -0.74
SPTAN1-217ENST00000629089 ANKRD29Q8N6D5 301 aa10.41□□□□□ -0.74
SPTAN1-217ENST00000629089 Q8NBF4 154 aa10.41□□□□□ -0.74
SPTAN1-217ENST00000629089 A0A1B0GV72 72 aa10.39□□□□□ -0.75
SPTAN1-217ENST00000629089 SSBP3-AS1Q7Z2R9 100 aa10.38□□□□□ -0.75
SPTAN1-217ENST00000629089 PRO0461Q9UI25 63 aa10.37□□□□□ -0.75
SPTAN1-217ENST00000629089 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
SPTAN1-217ENST00000629089 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-217ENST00000629089 F8W1H4 67 aa10.35□□□□□ -0.75
SPTAN1-217ENST00000629089 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-217ENST00000629089 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
SPTAN1-217ENST00000629089 LRP1Q07954 4544 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-217ENST00000629089 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
SPTAN1-217ENST00000629089 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
SPTAN1-217ENST00000629089 RBM3P98179 157 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-217ENST00000629089 Q6JHZ5 121 aa10.33□□□□□ -0.76
SPTAN1-217ENST00000629089 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
SPTAN1-217ENST00000629089 MT1HL1P0DM35 61 aa10.32□□□□□ -0.76
SPTAN1-217ENST00000629089 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
SPTAN1-217ENST00000629089 A0A0G2JQZ4 141 aa10.31□□□□□ -0.76
SPTAN1-217ENST00000629089 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
SPTAN1-217ENST00000629089 J3QL48 77 aa10.3□□□□□ -0.76
SPTAN1-217ENST00000629089 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
SPTAN1-217ENST00000629089 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
SPTAN1-217ENST00000629089 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
SPTAN1-217ENST00000629089 HRCT1Q6UXD1 115 aa10.28□□□□□ -0.76
SPTAN1-217ENST00000629089 OBSCN-AS1Q96MR7 158 aa10.27□□□□□ -0.77
SPTAN1-217ENST00000629089 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
SPTAN1-217ENST00000629089 TRBV7-4A0A0J9YYF1 115 aa10.25□□□□□ -0.77
SPTAN1-217ENST00000629089 SPAG11AQ6PDA7 123 aa10.25□□□□□ -0.77
SPTAN1-217ENST00000629089 ETDBQ3ZM63 59 aa10.23□□□□□ -0.77
SPTAN1-217ENST00000629089 TEN1Q86WV5 123 aa10.23□□□□□ -0.77
SPTAN1-217ENST00000629089 VPS25Q9BRG1 176 aa10.23□□□□□ -0.77
SPTAN1-217ENST00000629089 CCKP06307 115 aa10.22□□□□□ -0.77
SPTAN1-217ENST00000629089 CD164Q04900 197 aa10.22□□□□□ -0.77
SPTAN1-217ENST00000629089 TNXBP22105 4242 aa10.22□□□□□ -0.77
SPTAN1-217ENST00000629089 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.78
SPTAN1-217ENST00000629089 SPINK1P00995 79 aa10.21□□□□□ -0.78
SPTAN1-217ENST00000629089 PDE6GP18545 87 aa10.21□□□□□ -0.78
SPTAN1-217ENST00000629089 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
SPTAN1-217ENST00000629089 Q6ZQT0 140 aa10.2□□□□□ -0.78
SPTAN1-217ENST00000629089 Q6Q795 121 aa10.18□□□□□ -0.78
SPTAN1-217ENST00000629089 PCLOQ9Y6V0 5065 aa10.18□□□□□ -0.78
SPTAN1-217ENST00000629089 TRBV7-7A0A0K0K1E9 115 aa10.17□□□□□ -0.78
SPTAN1-217ENST00000629089 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
SPTAN1-217ENST00000629089 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.78
SPTAN1-217ENST00000629089 LIMD2Q9BT23 127 aa10.15□□□□□ -0.78
SPTAN1-217ENST00000629089 A0A087WSZ3 146 aa10.13□□□□□ -0.79
SPTAN1-217ENST00000629089 DMBT1Q9UGM3 2413 aaPredicted RBP10.1□□□□□ -0.79
SPTAN1-217ENST00000629089 SS18L2Q9UHA2 77 aa10.09□□□□□ -0.79
SPTAN1-217ENST00000629089 Q5XG85 94 aa10.08□□□□□ -0.8
SPTAN1-217ENST00000629089 A0A1B0GW54 56 aa10.07□□□□□ -0.8
SPTAN1-217ENST00000629089 RETNLBQ9BQ08 111 aa10.04□□□□□ -0.8
SPTAN1-217ENST00000629089 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.8
SPTAN1-217ENST00000629089 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
SPTAN1-217ENST00000629089 NREPQ16612 68 aa9.98□□□□□ -0.81
SPTAN1-217ENST00000629089 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
SPTAN1-217ENST00000629089 J3QR89 54 aa9.95□□□□□ -0.82
SPTAN1-217ENST00000629089 PRR4Q16378 134 aa9.95□□□□□ -0.82
SPTAN1-217ENST00000629089 ACYP1P07311 99 aa9.94□□□□□ -0.82
SPTAN1-217ENST00000629089 DEFB116Q30KQ4 102 aa9.94□□□□□ -0.82
SPTAN1-217ENST00000629089 Q96NJ1 140 aa9.94□□□□□ -0.82
SPTAN1-217ENST00000629089 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
SPTAN1-217ENST00000629089 LINC00472Q9H8W2 130 aa9.93□□□□□ -0.82
SPTAN1-217ENST00000629089 FAM240AA0A1B0GVK7 77 aa9.92□□□□□ -0.82
SPTAN1-217ENST00000629089 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
SPTAN1-217ENST00000629089 Q6ZVQ6 151 aa9.92□□□□□ -0.82
SPTAN1-217ENST00000629089 IGKV4-1P06312 121 aa9.91□□□□□ -0.82
SPTAN1-217ENST00000629089 SIGMAR1Q99720 223 aa9.9□□□□□ -0.82
SPTAN1-217ENST00000629089 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
SPTAN1-217ENST00000629089 J3KT08 172 aa9.87□□□□□ -0.83
SPTAN1-217ENST00000629089 K7ERU9 68 aa9.85□□□□□ -0.83
SPTAN1-217ENST00000629089 BPY2O14599 106 aa9.85□□□□□ -0.83
SPTAN1-217ENST00000629089 HERC1Q15751 4861 aa9.81□□□□□ -0.84
SPTAN1-217ENST00000629089 NDUFB1O75438 58 aa9.8□□□□□ -0.84
SPTAN1-217ENST00000629089 A8MWP4 228 aa9.78□□□□□ -0.84
SPTAN1-217ENST00000629089 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.84
SPTAN1-217ENST00000629089 DSCR10P59022 87 aa9.77□□□□□ -0.84
SPTAN1-217ENST00000629089 A0A1B0GVX0 72 aa9.77□□□□□ -0.85
SPTAN1-217ENST00000629089 C9orf92A6NGG3 77 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms