RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 Q8NBF4 154 aa5.92□□□□□ -1.46
TCF4-253ENST00000626466 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
TCF4-253ENST00000626466 MT1HP80294 61 aa5.91□□□□□ -1.46
TCF4-253ENST00000626466 ZNF625Q96I27 306 aaPredicted RBP5.91□□□□□ -1.46
TCF4-253ENST00000626466 SPRR4Q96PI1 79 aa5.91□□□□□ -1.46
TCF4-253ENST00000626466 LITAFQ99732 161 aa5.91□□□□□ -1.46
TCF4-253ENST00000626466 HIGD2AQ9BW72 106 aa5.91□□□□□ -1.46
TCF4-253ENST00000626466 ERG28Q9UKR5 140 aa5.91□□□□□ -1.46
TCF4-253ENST00000626466 TRBV20-1A0A075B6N2 111 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 CFC1BP0CG36 223 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 CFC1P0CG37 223 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 PFN2P35080 140 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 Q1RN00 199 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 NAA38Q9BRA0 125 aaKnown RBP5.9□□□□□ -1.46
TCF4-253ENST00000626466 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
TCF4-253ENST00000626466 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
TCF4-253ENST00000626466 COX6CP09669 75 aa5.89□□□□□ -1.47
TCF4-253ENST00000626466 SCGB1C2P0DMR2 95 aa5.89□□□□□ -1.47
TCF4-253ENST00000626466 PSMB2P49721 201 aa5.89□□□□□ -1.47
TCF4-253ENST00000626466 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
TCF4-253ENST00000626466 ADAMTSL4-AS1Q5T5F5 129 aa5.88□□□□□ -1.47
TCF4-253ENST00000626466 LINC00308Q8TCZ7 52 aa5.88□□□□□ -1.47
TCF4-253ENST00000626466 F8W1H4 67 aa5.87□□□□□ -1.47
TCF4-253ENST00000626466 LINC00158P58513 81 aa5.86□□□□□ -1.47
TCF4-253ENST00000626466 H7C2G1 150 aa5.85□□□□□ -1.47
TCF4-253ENST00000626466 NPC2P61916 151 aa5.85□□□□□ -1.47
TCF4-253ENST00000626466 COX17Q14061 63 aa5.85□□□□□ -1.47
TCF4-253ENST00000626466 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
TCF4-253ENST00000626466 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 K7ERU9 68 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 Q8N377 158 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 MIR7-3HGQ8N6C7 128 aa5.84□□□□□ -1.47
TCF4-253ENST00000626466 H3BMG7 143 aa5.83□□□□□ -1.48
TCF4-253ENST00000626466 SPINK1P00995 79 aa5.83□□□□□ -1.48
TCF4-253ENST00000626466 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
TCF4-253ENST00000626466 J3QR89 54 aa5.82□□□□□ -1.48
TCF4-253ENST00000626466 MOBPQ13875 183 aa5.82□□□□□ -1.48
TCF4-253ENST00000626466 PCP4P48539 62 aa5.81□□□□□ -1.48
TCF4-253ENST00000626466 SMCR5Q8TEV8 140 aa5.81□□□□□ -1.48
TCF4-253ENST00000626466 TCL1BO95988 128 aa5.8□□□□□ -1.48
TCF4-253ENST00000626466 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
TCF4-253ENST00000626466 OCIAD2Q56VL3 154 aa5.8□□□□□ -1.48
TCF4-253ENST00000626466 ZNF706Q9Y5V0 76 aaPredicted RBP5.8□□□□□ -1.48
TCF4-253ENST00000626466 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
TCF4-253ENST00000626466 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
TCF4-253ENST00000626466 ERC2-IT1O76042 136 aa5.79□□□□□ -1.48
TCF4-253ENST00000626466 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
TCF4-253ENST00000626466 SOSTDC1Q6X4U4 206 aa5.79□□□□□ -1.48
TCF4-253ENST00000626466 NDUFC2O95298 119 aa5.78□□□□□ -1.48
TCF4-253ENST00000626466 SPRR1AP35321 89 aa5.78□□□□□ -1.48
TCF4-253ENST00000626466 GAGE2AQ6NT46 116 aa5.78□□□□□ -1.48
TCF4-253ENST00000626466 C9JAW5 83 aa5.77□□□□□ -1.49
TCF4-253ENST00000626466 PRYO14603 147 aa5.77□□□□□ -1.49
TCF4-253ENST00000626466 NCR3O14931 201 aa5.77□□□□□ -1.49
TCF4-253ENST00000626466 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
TCF4-253ENST00000626466 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
TCF4-253ENST00000626466 H0YGX0 51 aa5.76□□□□□ -1.49
TCF4-253ENST00000626466 SLC25A20O43772 301 aa5.76□□□□□ -1.49
TCF4-253ENST00000626466 RPS29P62273 56 aaKnown RBP5.76□□□□□ -1.49
TCF4-253ENST00000626466 OR13C6PQ8NH95 151 aa5.76□□□□□ -1.49
TCF4-253ENST00000626466 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
TCF4-253ENST00000626466 H3BT86 120 aa5.75□□□□□ -1.49
TCF4-253ENST00000626466 LST1O00453 97 aa5.75□□□□□ -1.49
TCF4-253ENST00000626466 SNCGO76070 127 aa5.75□□□□□ -1.49
TCF4-253ENST00000626466 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 ANKRD29Q8N6D5 301 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 CBY1Q9Y3M2 126 aa5.74□□□□□ -1.49
TCF4-253ENST00000626466 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 TRACP01848 142 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 VPS25Q9BRG1 176 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 Q9BRP9 147 aa5.73□□□□□ -1.49
TCF4-253ENST00000626466 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 DNAL4O96015 105 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 S100A7L2Q5SY68 101 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 SMIM11BQ8TCY0 68 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
TCF4-253ENST00000626466 A0A1B0GX51 115 aa5.7□□□□□ -1.5
TCF4-253ENST00000626466 M0R2T5 61 aa5.69□□□□□ -1.5
TCF4-253ENST00000626466 C9orf153Q5TBE3 101 aa5.69□□□□□ -1.5
TCF4-253ENST00000626466 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
TCF4-253ENST00000626466 H3BQ85 93 aa5.66□□□□□ -1.5
TCF4-253ENST00000626466 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
TCF4-253ENST00000626466 HRCT1Q6UXD1 115 aa5.66□□□□□ -1.5
TCF4-253ENST00000626466 Q6ZRX8 168 aa5.66□□□□□ -1.5
TCF4-253ENST00000626466 IGLV6-57P01721 117 aa5.65□□□□□ -1.5
TCF4-253ENST00000626466 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
TCF4-253ENST00000626466 TRAV23DV6A0A075B6W5 121 aa5.64□□□□□ -1.51
TCF4-253ENST00000626466 ORMDL1Q9P0S3 153 aa5.64□□□□□ -1.51
TCF4-253ENST00000626466 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
TCF4-253ENST00000626466 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
TCF4-253ENST00000626466 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms