RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 Q1T7F1 81 aa8.89□□□□□ -0.99
UBE3A-209ENST00000625778 LINC01556Q5JQF7 62 aa8.88□□□□□ -0.99
UBE3A-209ENST00000625778 NBEAL1Q6ZS30 2694 aa8.88□□□□□ -0.99
UBE3A-209ENST00000625778 KTN1-AS1Q86SY8 53 aa8.87□□□□□ -0.99
UBE3A-209ENST00000625778 Q5VV11 94 aa8.86□□□□□ -0.99
UBE3A-209ENST00000625778 MP68P56378 58 aa8.86□□□□□ -0.99
UBE3A-209ENST00000625778 TNP2Q05952 138 aa8.86□□□□□ -0.99
UBE3A-209ENST00000625778 KRTAP7-1Q8IUC3 87 aa8.85□□□□□ -0.99
UBE3A-209ENST00000625778 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
UBE3A-209ENST00000625778 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
UBE3A-209ENST00000625778 UBE2AP49459 152 aa8.83□□□□□ -1
UBE3A-209ENST00000625778 REG3GQ6UW15 175 aa8.83□□□□□ -1
UBE3A-209ENST00000625778 SPRR4Q96PI1 79 aa8.83□□□□□ -1
UBE3A-209ENST00000625778 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
UBE3A-209ENST00000625778 KRTAP10-11P60412 298 aa8.82□□□□□ -1
UBE3A-209ENST00000625778 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
UBE3A-209ENST00000625778 B9D2Q9BPU9 175 aa8.81□□□□□ -1
UBE3A-209ENST00000625778 ANK2Q01484 3957 aa8.81□□□□□ -1
UBE3A-209ENST00000625778 PRAC1Q96KF2 57 aa8.8□□□□□ -1
UBE3A-209ENST00000625778 H3BNG1 76 aa8.79□□□□□ -1
UBE3A-209ENST00000625778 LCA10Q71F78 164 aa8.79□□□□□ -1
UBE3A-209ENST00000625778 LCE6AA0A183 80 aa8.78□□□□□ -1
UBE3A-209ENST00000625778 H0Y9P7 68 aa8.78□□□□□ -1
UBE3A-209ENST00000625778 SPRR1AP35321 89 aa8.78□□□□□ -1
UBE3A-209ENST00000625778 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
UBE3A-209ENST00000625778 H0Y9J4 135 aa8.77□□□□□ -1.01
UBE3A-209ENST00000625778 H3BS24 57 aa8.77□□□□□ -1.01
UBE3A-209ENST00000625778 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
UBE3A-209ENST00000625778 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
UBE3A-209ENST00000625778 A0A1B0GW54 56 aa8.76□□□□□ -1.01
UBE3A-209ENST00000625778 NDUFB1O75438 58 aa8.75□□□□□ -1.01
UBE3A-209ENST00000625778 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
UBE3A-209ENST00000625778 DNAH10OSP0CZ25 163 aa8.75□□□□□ -1.01
UBE3A-209ENST00000625778 J3QKU1 62 aa8.75□□□□□ -1.01
UBE3A-209ENST00000625778 MDFIQ99750 246 aa8.74□□□□□ -1.01
UBE3A-209ENST00000625778 COL7A1Q02388 2944 aa8.74□□□□□ -1.01
UBE3A-209ENST00000625778 Q8N9P0 234 aaPredicted RBP8.73□□□□□ -1.01
UBE3A-209ENST00000625778 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
UBE3A-209ENST00000625778 KMT2BQ9UMN6 2715 aaPredicted RBP8.73□□□□□ -1.01
UBE3A-209ENST00000625778 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
UBE3A-209ENST00000625778 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
UBE3A-209ENST00000625778 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
UBE3A-209ENST00000625778 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
UBE3A-209ENST00000625778 TENM2Q9NT68 2774 aa8.69□□□□□ -1.02
UBE3A-209ENST00000625778 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
UBE3A-209ENST00000625778 C8orf87E5RJ46 101 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
UBE3A-209ENST00000625778 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 DNAH10Q8IVF4 4471 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
UBE3A-209ENST00000625778 NDUFS5O43920 106 aa8.65□□□□□ -1.02
UBE3A-209ENST00000625778 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
UBE3A-209ENST00000625778 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
UBE3A-209ENST00000625778 COA5Q86WW8 74 aa8.63□□□□□ -1.03
UBE3A-209ENST00000625778 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
UBE3A-209ENST00000625778 MOBPQ13875 183 aa8.63□□□□□ -1.03
UBE3A-209ENST00000625778 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
UBE3A-209ENST00000625778 SPINK7P58062 85 aa8.63□□□□□ -1.03
UBE3A-209ENST00000625778 A8MWP4 228 aa8.61□□□□□ -1.03
UBE3A-209ENST00000625778 A6NN06 94 aa8.61□□□□□ -1.03
UBE3A-209ENST00000625778 LYSTQ99698 3801 aa8.61□□□□□ -1.03
UBE3A-209ENST00000625778 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
UBE3A-209ENST00000625778 UBE2DNLQ8IWF7 75 aa8.58□□□□□ -1.04
UBE3A-209ENST00000625778 LINC00313P59037 77 aa8.58□□□□□ -1.04
UBE3A-209ENST00000625778 LOC101927531A0A1B0GV80 90 aa8.57□□□□□ -1.04
UBE3A-209ENST00000625778 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
UBE3A-209ENST00000625778 IGHV6-1A0A0B4J1U7 121 aa8.55□□□□□ -1.04
UBE3A-209ENST00000625778 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
UBE3A-209ENST00000625778 MMP24-AS1A0A0U1RRL7 71 aa8.54□□□□□ -1.04
UBE3A-209ENST00000625778 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
UBE3A-209ENST00000625778 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
UBE3A-209ENST00000625778 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.04
UBE3A-209ENST00000625778 H3BPC8 53 aa8.51□□□□□ -1.05
UBE3A-209ENST00000625778 Q75L30 129 aa8.51□□□□□ -1.05
UBE3A-209ENST00000625778 KRTAP24-1Q3LI83 254 aa8.51□□□□□ -1.05
UBE3A-209ENST00000625778 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
UBE3A-209ENST00000625778 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
UBE3A-209ENST00000625778 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
UBE3A-209ENST00000625778 PANO1I0J062 215 aa8.48□□□□□ -1.05
UBE3A-209ENST00000625778 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
UBE3A-209ENST00000625778 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
UBE3A-209ENST00000625778 DNAH1Q9P2D7 4330 aa8.46□□□□□ -1.06
UBE3A-209ENST00000625778 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
UBE3A-209ENST00000625778 K7EIL1 84 aa8.43□□□□□ -1.06
UBE3A-209ENST00000625778 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
UBE3A-209ENST00000625778 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
UBE3A-209ENST00000625778 A0A087X002 238 aa8.42□□□□□ -1.06
UBE3A-209ENST00000625778 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
UBE3A-209ENST00000625778 SPRR1BP22528 89 aa8.41□□□□□ -1.06
UBE3A-209ENST00000625778 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
UBE3A-209ENST00000625778 CMYA5Q8N3K9 4069 aa8.4□□□□□ -1.06
UBE3A-209ENST00000625778 HRES1P13985 223 aa8.4□□□□□ -1.07
UBE3A-209ENST00000625778 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.07
UBE3A-209ENST00000625778 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
UBE3A-209ENST00000625778 Q96NJ1 140 aa8.38□□□□□ -1.07
UBE3A-209ENST00000625778 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
UBE3A-209ENST00000625778 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
UBE3A-209ENST00000625778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms