RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 FAT1Q14517 4588 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 A0A0B4J2C4 111 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 PRR4Q16378 134 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 BVES-AS1Q5T3Y7 98 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 Q8NBF4 154 aa4.23□□□□□ -1.73
NPLOC4-221ENST00000625705 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 CFC1P0CG37 223 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 SPAG11AQ6PDA7 123 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 PRO1933Q9H354 126 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
NPLOC4-221ENST00000625705 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
NPLOC4-221ENST00000625705 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
NPLOC4-221ENST00000625705 F8WEM9 126 aa4.21□□□□□ -1.74
NPLOC4-221ENST00000625705 PSMB2P49721 201 aa4.21□□□□□ -1.74
NPLOC4-221ENST00000625705 FXYD2P54710 66 aa4.21□□□□□ -1.74
NPLOC4-221ENST00000625705 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
NPLOC4-221ENST00000625705 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
NPLOC4-221ENST00000625705 TSTD3H0UI37 97 aa4.19□□□□□ -1.74
NPLOC4-221ENST00000625705 SPRR1BP22528 89 aa4.19□□□□□ -1.74
NPLOC4-221ENST00000625705 Q6ZQY7 126 aa4.19□□□□□ -1.74
NPLOC4-221ENST00000625705 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
NPLOC4-221ENST00000625705 H0YGX0 51 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 K7ERJ3 54 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 M0R143 59 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 SPINK1P00995 79 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 COX6CP09669 75 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 HRCT1Q6UXD1 115 aa4.18□□□□□ -1.74
NPLOC4-221ENST00000625705 IGLV5-48A0A075B6I7 105 aa4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 DNAL4O96015 105 aa4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 CTAG1AP78358 180 aa4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 SNHG12Q9BXW3 62 aa4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
NPLOC4-221ENST00000625705 Q8N377 158 aa4.16□□□□□ -1.74
NPLOC4-221ENST00000625705 LIMD2Q9BT23 127 aa4.16□□□□□ -1.74
NPLOC4-221ENST00000625705 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
NPLOC4-221ENST00000625705 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
NPLOC4-221ENST00000625705 SCGB1C2P0DMR2 95 aa4.15□□□□□ -1.75
NPLOC4-221ENST00000625705 OCIAD2Q56VL3 154 aa4.15□□□□□ -1.75
NPLOC4-221ENST00000625705 MYCBP2O75592 4640 aa4.15□□□□□ -1.75
NPLOC4-221ENST00000625705 FABP2P12104 132 aa4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 BATFQ16520 125 aa4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 PPDPFLQ8WWR9 84 aa4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
NPLOC4-221ENST00000625705 A0A1B0GX51 115 aa4.13□□□□□ -1.75
NPLOC4-221ENST00000625705 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
NPLOC4-221ENST00000625705 FAM218AQ96MZ4 157 aa4.13□□□□□ -1.75
NPLOC4-221ENST00000625705 CD164Q04900 197 aa4.12□□□□□ -1.75
NPLOC4-221ENST00000625705 Q6JHZ5 121 aa4.12□□□□□ -1.75
NPLOC4-221ENST00000625705 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
NPLOC4-221ENST00000625705 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
NPLOC4-221ENST00000625705 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 H3BUT2 72 aa4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 NDUFV3P56181 108 aaKnown RBP4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 ORMDL1Q9P0S3 153 aa4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
NPLOC4-221ENST00000625705 A0A1B0GV72 72 aa4.1□□□□□ -1.75
NPLOC4-221ENST00000625705 TCL1BO95988 128 aa4.1□□□□□ -1.75
NPLOC4-221ENST00000625705 LYRM7Q5U5X0 104 aa4.1□□□□□ -1.75
NPLOC4-221ENST00000625705 H3BQ85 93 aa4.09□□□□□ -1.75
NPLOC4-221ENST00000625705 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
NPLOC4-221ENST00000625705 NAA38Q9BRA0 125 aaKnown RBP4.09□□□□□ -1.75
NPLOC4-221ENST00000625705 H3BMG7 143 aa4.08□□□□□ -1.76
NPLOC4-221ENST00000625705 TMEM256-PLSCR3K7ERE1 68 aa4.08□□□□□ -1.76
NPLOC4-221ENST00000625705 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
NPLOC4-221ENST00000625705 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
NPLOC4-221ENST00000625705 IGLV8-61A0A075B6I0 122 aa4.07□□□□□ -1.76
NPLOC4-221ENST00000625705 TRACP01848 142 aa4.07□□□□□ -1.76
NPLOC4-221ENST00000625705 ATXN8Q156A1 80 aa4.07□□□□□ -1.76
NPLOC4-221ENST00000625705 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
NPLOC4-221ENST00000625705 LST1O00453 97 aa4.06□□□□□ -1.76
NPLOC4-221ENST00000625705 PCP4L1A6NKN8 68 aa4.05□□□□□ -1.76
NPLOC4-221ENST00000625705 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
NPLOC4-221ENST00000625705 SS18L2Q9UHA2 77 aa4.05□□□□□ -1.76
NPLOC4-221ENST00000625705 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
NPLOC4-221ENST00000625705 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
NPLOC4-221ENST00000625705 Q5XG85 94 aa4.04□□□□□ -1.76
NPLOC4-221ENST00000625705 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
NPLOC4-221ENST00000625705 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
NPLOC4-221ENST00000625705 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
NPLOC4-221ENST00000625705 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
NPLOC4-221ENST00000625705 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
NPLOC4-221ENST00000625705 UBE2V1Q13404 147 aa4.03□□□□□ -1.76
NPLOC4-221ENST00000625705 DSCR8Q96T75 97 aa4.03□□□□□ -1.76
NPLOC4-221ENST00000625705 A0A087WSZ3 146 aa4.02□□□□□ -1.77
NPLOC4-221ENST00000625705 C9JAW5 83 aa4.02□□□□□ -1.77
NPLOC4-221ENST00000625705 CCKP06307 115 aa4.02□□□□□ -1.77
NPLOC4-221ENST00000625705 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
NPLOC4-221ENST00000625705 TNXBP22105 4242 aa4.01□□□□□ -1.77
NPLOC4-221ENST00000625705 RBM3P98179 157 aaKnown RBP4.01□□□□□ -1.77
NPLOC4-221ENST00000625705 Q6Q795 121 aa4.01□□□□□ -1.77
NPLOC4-221ENST00000625705 A0A1W2PPM0 123 aa4□□□□□ -1.77
NPLOC4-221ENST00000625705 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms