RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.86
LINC00963-218ENST00000624138 Q8N9P0 234 aaPredicted RBP3.46□□□□□ -1.86
LINC00963-218ENST00000624138 SPANXDQ9BXN6 97 aa3.46□□□□□ -1.86
LINC00963-218ENST00000624138 SPANXCQ9NY87 97 aa3.46□□□□□ -1.86
LINC00963-218ENST00000624138 Q6ZVH6 145 aa3.45□□□□□ -1.86
LINC00963-218ENST00000624138 S100PP25815 95 aa3.44□□□□□ -1.86
LINC00963-218ENST00000624138 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
LINC00963-218ENST00000624138 A0A0J9YXY3 114 aa3.43□□□□□ -1.86
LINC00963-218ENST00000624138 A0A1B0GWB2 263 aa3.43□□□□□ -1.86
LINC00963-218ENST00000624138 LST1O00453 97 aa3.43□□□□□ -1.86
LINC00963-218ENST00000624138 LINC00308Q8TCZ7 52 aa3.43□□□□□ -1.86
LINC00963-218ENST00000624138 KMT2DO14686 5537 aa3.43□□□□□ -1.86
LINC00963-218ENST00000624138 Q6JHZ5 121 aa3.42□□□□□ -1.86
LINC00963-218ENST00000624138 CLEC2BQ92478 149 aa3.42□□□□□ -1.86
LINC00963-218ENST00000624138 A6NN06 94 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 F8WEM9 126 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 LITAFQ99732 161 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 TRAPPC1Q9Y5R8 145 aa3.41□□□□□ -1.86
LINC00963-218ENST00000624138 HERVK_113P61574 105 aa3.4□□□□□ -1.87
LINC00963-218ENST00000624138 CHCHD1Q96BP2 118 aaKnown RBP3.4□□□□□ -1.87
LINC00963-218ENST00000624138 ZNF815PA8K554 130 aa3.39□□□□□ -1.87
LINC00963-218ENST00000624138 PLNP26678 52 aa3.39□□□□□ -1.87
LINC00963-218ENST00000624138 TRAV13-2A0A0B4J235 113 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 TIMM17BO60830 172 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 DSCR10P59022 87 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
LINC00963-218ENST00000624138 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
LINC00963-218ENST00000624138 DPM2O94777 84 aa3.37□□□□□ -1.87
LINC00963-218ENST00000624138 TMEM218A2RU14 115 aa3.36□□□□□ -1.87
LINC00963-218ENST00000624138 HSBP1L1C9JCN9 74 aa3.36□□□□□ -1.87
LINC00963-218ENST00000624138 E9PLD3 99 aa3.36□□□□□ -1.87
LINC00963-218ENST00000624138 IGKCP01834 107 aa3.36□□□□□ -1.87
LINC00963-218ENST00000624138 LINC00313P59037 77 aa3.35□□□□□ -1.87
LINC00963-218ENST00000624138 SEC61GP60059 68 aa3.35□□□□□ -1.87
LINC00963-218ENST00000624138 SS18L2Q9UHA2 77 aa3.35□□□□□ -1.87
LINC00963-218ENST00000624138 HSBP1O75506 76 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 SERF1AO75920 110 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 LEPROTL1O95214 131 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 SLC7A5P1Q8MH63 180 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 PMCHL2Q9BQD1 86 aa3.34□□□□□ -1.87
LINC00963-218ENST00000624138 MT1BP07438 61 aa3.33□□□□□ -1.88
LINC00963-218ENST00000624138 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
LINC00963-218ENST00000624138 A6NDN8 102 aa3.32□□□□□ -1.88
LINC00963-218ENST00000624138 COLCA2A8K830 154 aa3.32□□□□□ -1.88
LINC00963-218ENST00000624138 LINC00575Q6W349 94 aa3.32□□□□□ -1.88
LINC00963-218ENST00000624138 Q6ZQY7 126 aa3.32□□□□□ -1.88
LINC00963-218ENST00000624138 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
LINC00963-218ENST00000624138 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
LINC00963-218ENST00000624138 hADV29S1A0JD25 119 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 SPRR2EP22531 72 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 SPRR2BP35325 72 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 SPRR2AP35326 72 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 SPINK7P58062 85 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 CLLU1Q5K131 121 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 PPDPFLQ8WWR9 84 aa3.3□□□□□ -1.88
LINC00963-218ENST00000624138 H3BUT2 72 aa3.29□□□□□ -1.88
LINC00963-218ENST00000624138 VAMP3Q15836 100 aa3.29□□□□□ -1.88
LINC00963-218ENST00000624138 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
LINC00963-218ENST00000624138 HSPB8Q9UJY1 196 aa3.29□□□□□ -1.88
LINC00963-218ENST00000624138 A0A087WSZ3 146 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 IFITM1P13164 125 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 Q5VV11 94 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.28□□□□□ -1.88
LINC00963-218ENST00000624138 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 SIGMAR1Q99720 223 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 SNHG12Q9BXW3 62 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 TTTY13Q9BZ97 58 aa3.28□□□□□ -1.88
LINC00963-218ENST00000624138 A0A1W2PNM2 257 aa3.27□□□□□ -1.89
LINC00963-218ENST00000624138 FABP4P15090 132 aa3.27□□□□□ -1.89
LINC00963-218ENST00000624138 S100A6P06703 90 aa3.26□□□□□ -1.89
LINC00963-218ENST00000624138 MUSTN1Q8IVN3 82 aa3.26□□□□□ -1.89
LINC00963-218ENST00000624138 ZCCHC13Q8WW36 166 aaKnown RBP3.26□□□□□ -1.89
LINC00963-218ENST00000624138 SPRR2FQ96RM1 72 aa3.26□□□□□ -1.89
LINC00963-218ENST00000624138 IGKV4-1P06312 121 aa3.25□□□□□ -1.89
LINC00963-218ENST00000624138 Q6ZVQ6 151 aa3.25□□□□□ -1.89
LINC00963-218ENST00000624138 WFDC13Q8IUB5 93 aa3.25□□□□□ -1.89
LINC00963-218ENST00000624138 YPEL4Q96NS1 127 aa3.25□□□□□ -1.89
LINC00963-218ENST00000624138 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
LINC00963-218ENST00000624138 H1FX-AS1Q4G0G2 97 aa3.23□□□□□ -1.89
LINC00963-218ENST00000624138 SCGB1D4Q6XE38 83 aa3.23□□□□□ -1.89
LINC00963-218ENST00000624138 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
LINC00963-218ENST00000624138 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.9
LINC00963-218ENST00000624138 SYS1-DBNDD2H3BUS1 97 aa3.21□□□□□ -1.9
LINC00963-218ENST00000624138 LINC01545Q5VT33 79 aa3.21□□□□□ -1.9
LINC00963-218ENST00000624138 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
LINC00963-218ENST00000624138 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
LINC00963-218ENST00000624138 C3orf79P0CE67 100 aa3.2□□□□□ -1.9
LINC00963-218ENST00000624138 NDUFV3P56181 108 aaKnown RBP3.2□□□□□ -1.9
LINC00963-218ENST00000624138 TRGC2P03986 189 aa3.19□□□□□ -1.9
LINC00963-218ENST00000624138 SPRR2DP22532 72 aa3.19□□□□□ -1.9
LINC00963-218ENST00000624138 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
LINC00963-218ENST00000624138 RAB37Q96AX2 223 aa3.19□□□□□ -1.9
LINC00963-218ENST00000624138 H3BMG7 143 aa3.18□□□□□ -1.9
LINC00963-218ENST00000624138 BVES-AS1Q5T3Y7 98 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms