RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CRYGAP11844 174 aa10.09□□□□□ -0.79
LDB3-208ENST00000623007 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
LDB3-208ENST00000623007 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
LDB3-208ENST00000623007 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
LDB3-208ENST00000623007 ZNF861PO60384 105 aa10.06□□□□□ -0.8
LDB3-208ENST00000623007 DNAH10Q8IVF4 4471 aa10.05□□□□□ -0.8
LDB3-208ENST00000623007 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
LDB3-208ENST00000623007 IGFL1Q6UW32 110 aa10.04□□□□□ -0.8
LDB3-208ENST00000623007 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
LDB3-208ENST00000623007 BPY2O14599 106 aa10.03□□□□□ -0.8
LDB3-208ENST00000623007 Q6ZSA8 131 aa10.02□□□□□ -0.8
LDB3-208ENST00000623007 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
LDB3-208ENST00000623007 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
LDB3-208ENST00000623007 RYR3Q15413 4870 aa10□□□□□ -0.81
LDB3-208ENST00000623007 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
LDB3-208ENST00000623007 LCE6AA0A183 80 aa9.98□□□□□ -0.81
LDB3-208ENST00000623007 IGLV7-43P04211 117 aa9.98□□□□□ -0.81
LDB3-208ENST00000623007 A0A087WVE0 104 aa9.97□□□□□ -0.81
LDB3-208ENST00000623007 UQCRQO14949 82 aa9.97□□□□□ -0.81
LDB3-208ENST00000623007 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
LDB3-208ENST00000623007 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.81
LDB3-208ENST00000623007 COX7CP15954 63 aa9.94□□□□□ -0.82
LDB3-208ENST00000623007 SERP2Q8N6R1 65 aa9.94□□□□□ -0.82
LDB3-208ENST00000623007 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
LDB3-208ENST00000623007 KMT2AQ03164 3969 aa9.92□□□□□ -0.82
LDB3-208ENST00000623007 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
LDB3-208ENST00000623007 A0A087WSZ3 146 aa9.9□□□□□ -0.82
LDB3-208ENST00000623007 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
LDB3-208ENST00000623007 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
LDB3-208ENST00000623007 FAM30AQ9NZY2 134 aa9.9□□□□□ -0.83
LDB3-208ENST00000623007 J3KT08 172 aa9.89□□□□□ -0.83
LDB3-208ENST00000623007 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
LDB3-208ENST00000623007 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
LDB3-208ENST00000623007 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
LDB3-208ENST00000623007 CCDC179H3BU77 68 aa9.85□□□□□ -0.83
LDB3-208ENST00000623007 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
LDB3-208ENST00000623007 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
LDB3-208ENST00000623007 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
LDB3-208ENST00000623007 CD164Q04900 197 aa9.83□□□□□ -0.84
LDB3-208ENST00000623007 FAM229BQ4G0N7 80 aa9.83□□□□□ -0.84
LDB3-208ENST00000623007 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
LDB3-208ENST00000623007 DSCR10P59022 87 aa9.82□□□□□ -0.84
LDB3-208ENST00000623007 MOBPQ13875 183 aa9.81□□□□□ -0.84
LDB3-208ENST00000623007 A0A0G2JQZ4 141 aa9.8□□□□□ -0.84
LDB3-208ENST00000623007 LINC00472Q9H8W2 130 aa9.79□□□□□ -0.84
LDB3-208ENST00000623007 Q8N9L7 120 aa9.78□□□□□ -0.84
LDB3-208ENST00000623007 NDUFB1O75438 58 aa9.77□□□□□ -0.84
LDB3-208ENST00000623007 RYR2Q92736 4967 aa9.77□□□□□ -0.85
LDB3-208ENST00000623007 A8MWP4 228 aa9.77□□□□□ -0.85
LDB3-208ENST00000623007 K7EQZ3 153 aa9.76□□□□□ -0.85
LDB3-208ENST00000623007 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
LDB3-208ENST00000623007 HCG22E2RYF7 251 aa9.75□□□□□ -0.85
LDB3-208ENST00000623007 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
LDB3-208ENST00000623007 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
LDB3-208ENST00000623007 FRAS1Q86XX4 4008 aa9.72□□□□□ -0.85
LDB3-208ENST00000623007 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.86
LDB3-208ENST00000623007 OCR1Q9BZK8 76 aa9.71□□□□□ -0.86
LDB3-208ENST00000623007 ASB16-AS1Q495Z4 193 aa9.7□□□□□ -0.86
LDB3-208ENST00000623007 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
LDB3-208ENST00000623007 NDUFC1O43677 76 aa9.68□□□□□ -0.86
LDB3-208ENST00000623007 KLKP1Q107X0 134 aa9.68□□□□□ -0.86
LDB3-208ENST00000623007 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
LDB3-208ENST00000623007 HYDINQ4G0P3 5121 aa9.67□□□□□ -0.86
LDB3-208ENST00000623007 DEFB116Q30KQ4 102 aa9.67□□□□□ -0.86
LDB3-208ENST00000623007 TMEM258P61165 79 aa9.66□□□□□ -0.86
LDB3-208ENST00000623007 Q5XG85 94 aa9.66□□□□□ -0.86
LDB3-208ENST00000623007 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
LDB3-208ENST00000623007 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
LDB3-208ENST00000623007 HRCT1Q6UXD1 115 aa9.65□□□□□ -0.86
LDB3-208ENST00000623007 Q96NJ1 140 aa9.65□□□□□ -0.86
LDB3-208ENST00000623007 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
LDB3-208ENST00000623007 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
LDB3-208ENST00000623007 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
LDB3-208ENST00000623007 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
LDB3-208ENST00000623007 TMEM254Q8TBM7 123 aa9.61□□□□□ -0.87
LDB3-208ENST00000623007 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
LDB3-208ENST00000623007 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
LDB3-208ENST00000623007 PKD1P98161 4303 aa9.6□□□□□ -0.87
LDB3-208ENST00000623007 DNAH11Q96DT5 4516 aa9.6□□□□□ -0.87
LDB3-208ENST00000623007 A0A1B0GVX0 72 aa9.59□□□□□ -0.87
LDB3-208ENST00000623007 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
LDB3-208ENST00000623007 A0A087X002 238 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 FAT2Q9NYQ8 4349 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
LDB3-208ENST00000623007 BIRC6Q9NR09 4857 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 KRTAP13-2Q52LG2 175 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
LDB3-208ENST00000623007 hDV103S1A0JD37 113 aa9.57□□□□□ -0.88
LDB3-208ENST00000623007 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
LDB3-208ENST00000623007 TP53AIP1Q9HCN2 124 aa9.56□□□□□ -0.88
LDB3-208ENST00000623007 H3BPC8 53 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
LDB3-208ENST00000623007 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 SPINK1P00995 79 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 MP68P56378 58 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 SPAG11AQ6PDA7 123 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 TYMSOSQ8TAI1 123 aa9.55□□□□□ -0.88
LDB3-208ENST00000623007 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms