RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TNP2Q05952 138 aa8.35□□□□□ -1.07
CHD1L-210ENST00000622533 KRTAP10-11P60412 298 aa8.34□□□□□ -1.07
CHD1L-210ENST00000622533 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
CHD1L-210ENST00000622533 SPRR4Q96PI1 79 aa8.33□□□□□ -1.08
CHD1L-210ENST00000622533 FAM168BA1KXE4 195 aa8.33□□□□□ -1.08
CHD1L-210ENST00000622533 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
CHD1L-210ENST00000622533 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
CHD1L-210ENST00000622533 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
CHD1L-210ENST00000622533 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
CHD1L-210ENST00000622533 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
CHD1L-210ENST00000622533 RPL37AP61513 92 aaKnown RBP8.3□□□□□ -1.08
CHD1L-210ENST00000622533 CD164Q04900 197 aa8.3□□□□□ -1.08
CHD1L-210ENST00000622533 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
CHD1L-210ENST00000622533 NDUFB1O75438 58 aa8.29□□□□□ -1.08
CHD1L-210ENST00000622533 MP68P56378 58 aa8.29□□□□□ -1.08
CHD1L-210ENST00000622533 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
CHD1L-210ENST00000622533 UBE2BP63146 152 aa8.28□□□□□ -1.08
CHD1L-210ENST00000622533 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
CHD1L-210ENST00000622533 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
CHD1L-210ENST00000622533 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
CHD1L-210ENST00000622533 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
CHD1L-210ENST00000622533 UBE2AP49459 152 aa8.25□□□□□ -1.09
CHD1L-210ENST00000622533 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
CHD1L-210ENST00000622533 H0Y9P7 68 aa8.23□□□□□ -1.09
CHD1L-210ENST00000622533 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
CHD1L-210ENST00000622533 A0A087WSZ3 146 aa8.23□□□□□ -1.09
CHD1L-210ENST00000622533 LCA10Q71F78 164 aa8.23□□□□□ -1.09
CHD1L-210ENST00000622533 IGFL1Q6UW32 110 aa8.22□□□□□ -1.09
CHD1L-210ENST00000622533 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
CHD1L-210ENST00000622533 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
CHD1L-210ENST00000622533 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.09
CHD1L-210ENST00000622533 LIMD2Q9BT23 127 aa8.21□□□□□ -1.1
CHD1L-210ENST00000622533 A6NED7 52 aa8.2□□□□□ -1.1
CHD1L-210ENST00000622533 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
CHD1L-210ENST00000622533 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
CHD1L-210ENST00000622533 CASC2Q6XLA1 102 aa8.17□□□□□ -1.1
CHD1L-210ENST00000622533 SPANXA2-OT1Q8N9U9 137 aa8.16□□□□□ -1.1
CHD1L-210ENST00000622533 LYSTQ99698 3801 aa8.16□□□□□ -1.1
CHD1L-210ENST00000622533 COA5Q86WW8 74 aa8.15□□□□□ -1.1
CHD1L-210ENST00000622533 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
CHD1L-210ENST00000622533 PRLHP81277 87 aa8.14□□□□□ -1.11
CHD1L-210ENST00000622533 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
CHD1L-210ENST00000622533 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
CHD1L-210ENST00000622533 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
CHD1L-210ENST00000622533 Q75L30 129 aa8.13□□□□□ -1.11
CHD1L-210ENST00000622533 KRTAP24-1Q3LI83 254 aa8.13□□□□□ -1.11
CHD1L-210ENST00000622533 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
CHD1L-210ENST00000622533 A6NN06 94 aa8.12□□□□□ -1.11
CHD1L-210ENST00000622533 A0A096LNI7 61 aa8.11□□□□□ -1.11
CHD1L-210ENST00000622533 PCOTHQ58A44 107 aa8.11□□□□□ -1.11
CHD1L-210ENST00000622533 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
CHD1L-210ENST00000622533 H0Y9J4 135 aa8.1□□□□□ -1.11
CHD1L-210ENST00000622533 C14orf177Q52M58 125 aa8.1□□□□□ -1.11
CHD1L-210ENST00000622533 H3BPC8 53 aa8.09□□□□□ -1.11
CHD1L-210ENST00000622533 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.12
CHD1L-210ENST00000622533 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.12
CHD1L-210ENST00000622533 SPRR1BP22528 89 aa8.09□□□□□ -1.12
CHD1L-210ENST00000622533 NDUFS5O43920 106 aa8.06□□□□□ -1.12
CHD1L-210ENST00000622533 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
CHD1L-210ENST00000622533 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
CHD1L-210ENST00000622533 MOBPQ13875 183 aa8.06□□□□□ -1.12
CHD1L-210ENST00000622533 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
CHD1L-210ENST00000622533 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
CHD1L-210ENST00000622533 A8MWP4 228 aa8.05□□□□□ -1.12
CHD1L-210ENST00000622533 TGP01266 2768 aa8.04□□□□□ -1.12
CHD1L-210ENST00000622533 DNAH3Q8TD57 4116 aa8.04□□□□□ -1.12
CHD1L-210ENST00000622533 SPINK7P58062 85 aa8.03□□□□□ -1.12
CHD1L-210ENST00000622533 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
CHD1L-210ENST00000622533 CMYA5Q8N3K9 4069 aa8.03□□□□□ -1.12
CHD1L-210ENST00000622533 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
CHD1L-210ENST00000622533 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
CHD1L-210ENST00000622533 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
CHD1L-210ENST00000622533 K7EIL1 84 aa8□□□□□ -1.13
CHD1L-210ENST00000622533 UBE2DNLQ8IWF7 75 aa8□□□□□ -1.13
CHD1L-210ENST00000622533 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
CHD1L-210ENST00000622533 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
CHD1L-210ENST00000622533 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.13
CHD1L-210ENST00000622533 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
CHD1L-210ENST00000622533 HRES1P13985 223 aa7.95□□□□□ -1.14
CHD1L-210ENST00000622533 APLNQ9ULZ1 77 aa7.94□□□□□ -1.14
CHD1L-210ENST00000622533 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
CHD1L-210ENST00000622533 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
CHD1L-210ENST00000622533 DNAH10Q8IVF4 4471 aa7.91□□□□□ -1.14
CHD1L-210ENST00000622533 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
CHD1L-210ENST00000622533 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
CHD1L-210ENST00000622533 HUWE1Q7Z6Z7 4374 aaKnown RBP7.89□□□□□ -1.15
CHD1L-210ENST00000622533 LINC00313P59037 77 aa7.88□□□□□ -1.15
CHD1L-210ENST00000622533 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
CHD1L-210ENST00000622533 MDFIQ99750 246 aa7.87□□□□□ -1.15
CHD1L-210ENST00000622533 DNAH7Q8WXX0 4024 aa7.87□□□□□ -1.15
CHD1L-210ENST00000622533 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
CHD1L-210ENST00000622533 C8orf87E5RJ46 101 aa7.87□□□□□ -1.15
CHD1L-210ENST00000622533 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
CHD1L-210ENST00000622533 Q96NJ1 140 aa7.86□□□□□ -1.15
CHD1L-210ENST00000622533 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
CHD1L-210ENST00000622533 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
CHD1L-210ENST00000622533 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
CHD1L-210ENST00000622533 Q6ZR54 194 aa7.85□□□□□ -1.15
CHD1L-210ENST00000622533 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
CHD1L-210ENST00000622533 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms