RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ANKRD39Q53RE8 183 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 LINC00518Q8N0U6 118 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 CLEC2BQ92478 149 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 MIEN1Q9BRT3 115 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 KRTAP4-8Q9BYQ9 185 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 CRIPTQ9P021 101 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 FAM236AA0A1B0GUQ0 79 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 FAM236BA0A1B0GV22 79 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 COLCA2A8K830 154 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 F8WEM9 126 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 HBDP02042 147 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 SRP19P09132 144 aaKnown RBP0.98□□□□□ -2.25
CPNE3-211ENST00000621526 MT4P47944 62 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 NMUP48645 174 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 DSCR10P59022 87 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 PEA15Q15121 130 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 ZCCHC13Q8WW36 166 aaKnown RBP0.98□□□□□ -2.25
CPNE3-211ENST00000621526 SPANXDQ9BXN6 97 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 NHP2Q9NX24 153 aaKnown RBP0.98□□□□□ -2.25
CPNE3-211ENST00000621526 NAT8Q9UHE5 227 aa0.98□□□□□ -2.25
CPNE3-211ENST00000621526 A0A0J9YXY3 114 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 C9JQL5 133 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 SCGB1D1O95968 90 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 MT1XP80297 61 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 KLKP1Q107X0 134 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 COX19Q49B96 90 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 LCE5AQ5TCM9 118 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 UQCC3Q6UW78 93 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 TEN1Q86WV5 123 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 WFDC13Q8IUB5 93 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 OR13C6PQ8NH95 151 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 SPANXCQ9NY87 97 aa0.97□□□□□ -2.25
CPNE3-211ENST00000621526 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
CPNE3-211ENST00000621526 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 TRAV12-1A0A0B4J245 112 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 MT-ND4LP03901 98 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 RBM3P98179 157 aaKnown RBP0.96□□□□□ -2.26
CPNE3-211ENST00000621526 ADIRFQ15847 76 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 NDUFA5Q16718 116 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 CSAG1Q6PB30 78 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 PRR15Q8IV56 129 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 PPDPFLQ8WWR9 84 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 KRTAP4-6Q9BYQ5 205 aa0.96□□□□□ -2.26
CPNE3-211ENST00000621526 A0A096LNJ9 63 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 LEPROTO15243 131 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 EIF4EBP3O60516 100 aaPredicted RBP0.95□□□□□ -2.26
CPNE3-211ENST00000621526 LINC00614P0C842 121 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 S100PP25815 95 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 ADAMTSL4-AS1Q5T5F5 129 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 SMCO4Q9NRQ5 59 aa0.95□□□□□ -2.26
CPNE3-211ENST00000621526 C8orf87E5RJ46 101 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 J3QQQ9 107 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 SNAPINO95295 136 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 IGKV4-1P06312 121 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 KRTAP10-12P60413 245 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 VAMP3Q15836 100 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 CLLU1Q5K131 121 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 SLC7A5P1Q8MH63 180 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 SVBPQ8N300 66 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 LINC00308Q8TCZ7 52 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 PLAC4Q8WY50 150 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 DSCR8Q96T75 97 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 SNHG12Q9BXW3 62 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 SEC11CQ9BY50 192 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 RPS10P5Q9NQ39 176 aa0.94□□□□□ -2.26
CPNE3-211ENST00000621526 A0A087WSZ3 146 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 IGKV3D-7A0A0C4DH55 119 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 hADV29S1A0JD25 119 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 TIMM17BO60830 172 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 FABP9Q0Z7S8 132 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 C5orf47Q569G3 176 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.93□□□□□ -2.26
CPNE3-211ENST00000621526 LINC00575Q6W349 94 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 RAB37Q96AX2 223 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 LINC00472Q9H8W2 130 aa0.93□□□□□ -2.26
CPNE3-211ENST00000621526 IGHV6-1A0A0B4J1U7 121 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 TMEM218A2RU14 115 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 TSPEAR-AS2P59090 65 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 Q6ZQY7 126 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 COPS9Q8WXC6 57 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 IFI27L1Q96BM0 104 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 CHCHD1Q96BP2 118 aaKnown RBP0.92□□□□□ -2.26
CPNE3-211ENST00000621526 SIGMAR1Q99720 223 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 LITAFQ99732 161 aa0.92□□□□□ -2.26
CPNE3-211ENST00000621526 hCG_2014768A0A024R1R8 64 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 TRBV7-4A0A0J9YYF1 115 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 A0A1B0GVX0 72 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 A6NDN8 102 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 MT1GP13640 62 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 PLNP26678 52 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 KRTAP10-7P60409 375 aaPredicted RBP0.91□□□□□ -2.26
CPNE3-211ENST00000621526 HERVK_113P61574 105 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 NPC2P61916 151 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 SNRPEP62304 92 aaKnown RBP0.91□□□□□ -2.26
CPNE3-211ENST00000621526 LYRM7Q5U5X0 104 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 LCA10Q71F78 164 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 URB1-AS1Q96HZ7 61 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 CYSTM1Q9H1C7 97 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms