RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 FRAS1Q86XX4 4008 aa12.55□□□□□ -0.4
MMP28-207ENST00000619655 UBE2AP49459 152 aa12.55□□□□□ -0.4
MMP28-207ENST00000619655 ATP5EP2Q5VTU8 51 aa12.54□□□□□ -0.4
MMP28-207ENST00000619655 DNAH6Q9C0G6 4158 aa12.54□□□□□ -0.4
MMP28-207ENST00000619655 ALMS1Q8TCU4 4167 aa12.53□□□□□ -0.4
MMP28-207ENST00000619655 CYSTM1Q9H1C7 97 aa12.53□□□□□ -0.4
MMP28-207ENST00000619655 C3orf84H3BNL1 204 aa12.53□□□□□ -0.4
MMP28-207ENST00000619655 Q6ZVQ6 151 aa12.5□□□□□ -0.41
MMP28-207ENST00000619655 C1orf137Q5JT78 98 aa12.49□□□□□ -0.41
MMP28-207ENST00000619655 BCE1O60756 84 aa12.49□□□□□ -0.41
MMP28-207ENST00000619655 HAMPP81172 84 aa12.49□□□□□ -0.41
MMP28-207ENST00000619655 SMIM29Q86T20 159 aa12.48□□□□□ -0.41
MMP28-207ENST00000619655 H0Y9J4 135 aa12.46□□□□□ -0.41
MMP28-207ENST00000619655 F8WEM9 126 aa12.46□□□□□ -0.41
MMP28-207ENST00000619655 KRTAP10-2P60368 255 aa12.46□□□□□ -0.41
MMP28-207ENST00000619655 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
MMP28-207ENST00000619655 A0A0G2JQZ4 141 aa12.44□□□□□ -0.42
MMP28-207ENST00000619655 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
MMP28-207ENST00000619655 PLAC8Q9NZF1 115 aa12.43□□□□□ -0.42
MMP28-207ENST00000619655 A0A1W2PNM2 257 aa12.42□□□□□ -0.42
MMP28-207ENST00000619655 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
MMP28-207ENST00000619655 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
MMP28-207ENST00000619655 DNAH11Q96DT5 4516 aa12.41□□□□□ -0.42
MMP28-207ENST00000619655 PSORS1C2Q9UIG4 136 aa12.4□□□□□ -0.42
MMP28-207ENST00000619655 KRTAP13-1Q8IUC0 172 aa12.4□□□□□ -0.42
MMP28-207ENST00000619655 FAT2Q9NYQ8 4349 aa12.38□□□□□ -0.43
MMP28-207ENST00000619655 NREPQ16612 68 aa12.37□□□□□ -0.43
MMP28-207ENST00000619655 Q8NBF4 154 aa12.37□□□□□ -0.43
MMP28-207ENST00000619655 PKD1P98161 4303 aa12.37□□□□□ -0.43
MMP28-207ENST00000619655 IGFL1Q6UW32 110 aa12.36□□□□□ -0.43
MMP28-207ENST00000619655 FAM30AQ9NZY2 134 aa12.36□□□□□ -0.43
MMP28-207ENST00000619655 CXCL6P80162 114 aa12.33□□□□□ -0.44
MMP28-207ENST00000619655 OXTP01178 125 aa12.33□□□□□ -0.44
MMP28-207ENST00000619655 SPRR1BP22528 89 aa12.31□□□□□ -0.44
MMP28-207ENST00000619655 CIRBP-AS1Q8TBR5 109 aa12.31□□□□□ -0.44
MMP28-207ENST00000619655 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
MMP28-207ENST00000619655 C20orf197Q8N268 126 aa12.29□□□□□ -0.44
MMP28-207ENST00000619655 SACSQ9NZJ4 4579 aa12.29□□□□□ -0.44
MMP28-207ENST00000619655 IGLV8-61A0A075B6I0 122 aa12.28□□□□□ -0.44
MMP28-207ENST00000619655 Q8N9L7 120 aa12.28□□□□□ -0.44
MMP28-207ENST00000619655 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
MMP28-207ENST00000619655 TRAV7A0A075B6U4 112 aa12.27□□□□□ -0.44
MMP28-207ENST00000619655 BPY2O14599 106 aa12.27□□□□□ -0.45
MMP28-207ENST00000619655 IGLV9-49A0A0B4J1Y8 123 aa12.26□□□□□ -0.45
MMP28-207ENST00000619655 A0A1B0GW54 56 aa12.26□□□□□ -0.45
MMP28-207ENST00000619655 ZNF861PO60384 105 aa12.26□□□□□ -0.45
MMP28-207ENST00000619655 FAM236DA0A1B0GTK5 79 aa12.24□□□□□ -0.45
MMP28-207ENST00000619655 FAM236CP0DP71 79 aa12.24□□□□□ -0.45
MMP28-207ENST00000619655 A0A087WSZ3 146 aa12.23□□□□□ -0.45
MMP28-207ENST00000619655 Q5XG85 94 aa12.23□□□□□ -0.45
MMP28-207ENST00000619655 ANAPC11Q9NYG5 84 aa12.22□□□□□ -0.45
MMP28-207ENST00000619655 IGLV7-43P04211 117 aa12.2□□□□□ -0.46
MMP28-207ENST00000619655 ZNF706Q9Y5V0 76 aaPredicted RBP12.2□□□□□ -0.46
MMP28-207ENST00000619655 H7BZZ5 65 aa12.19□□□□□ -0.46
MMP28-207ENST00000619655 C4orf26Q17RF5 130 aa12.19□□□□□ -0.46
MMP28-207ENST00000619655 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
MMP28-207ENST00000619655 Q6ZSA8 131 aa12.19□□□□□ -0.46
MMP28-207ENST00000619655 DEFB116Q30KQ4 102 aa12.18□□□□□ -0.46
MMP28-207ENST00000619655 PKHD1P08F94 4074 aa12.18□□□□□ -0.46
MMP28-207ENST00000619655 LINC00483Q53H64 154 aa12.17□□□□□ -0.46
MMP28-207ENST00000619655 SERP1Q9Y6X1 66 aa12.17□□□□□ -0.46
MMP28-207ENST00000619655 LCE6AA0A183 80 aa12.16□□□□□ -0.46
MMP28-207ENST00000619655 IGKV4-1P06312 121 aa12.16□□□□□ -0.46
MMP28-207ENST00000619655 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
MMP28-207ENST00000619655 HRCT1Q6UXD1 115 aa12.14□□□□□ -0.47
MMP28-207ENST00000619655 MOBPQ13875 183 aa12.12□□□□□ -0.47
MMP28-207ENST00000619655 DSCR10P59022 87 aa12.1□□□□□ -0.47
MMP28-207ENST00000619655 K7EQZ3 153 aa12.09□□□□□ -0.47
MMP28-207ENST00000619655 NDUFC1O43677 76 aa12.08□□□□□ -0.48
MMP28-207ENST00000619655 SNURFQ9Y675 71 aa12.08□□□□□ -0.48
MMP28-207ENST00000619655 KMT2CQ8NEZ4 4911 aaKnown RBP12.04□□□□□ -0.48
MMP28-207ENST00000619655 VPS13BQ7Z7G8 4022 aa12.04□□□□□ -0.48
MMP28-207ENST00000619655 RPL37AP61513 92 aaKnown RBP12.04□□□□□ -0.48
MMP28-207ENST00000619655 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
MMP28-207ENST00000619655 ATP5EP56381 51 aaPredicted RBP12.03□□□□□ -0.48
MMP28-207ENST00000619655 SMIM26A0A096LP01 95 aa12□□□□□ -0.49
MMP28-207ENST00000619655 RYR2Q92736 4967 aa12□□□□□ -0.49
MMP28-207ENST00000619655 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
MMP28-207ENST00000619655 OCR1Q9BZK8 76 aa11.96□□□□□ -0.49
MMP28-207ENST00000619655 TMEM254Q8TBM7 123 aa11.95□□□□□ -0.5
MMP28-207ENST00000619655 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
MMP28-207ENST00000619655 A0A1B0GVY2 172 aa11.93□□□□□ -0.5
MMP28-207ENST00000619655 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
MMP28-207ENST00000619655 A0A087X002 238 aa11.92□□□□□ -0.5
MMP28-207ENST00000619655 HCG22E2RYF7 251 aa11.92□□□□□ -0.5
MMP28-207ENST00000619655 WFDC13Q8IUB5 93 aa11.91□□□□□ -0.5
MMP28-207ENST00000619655 SMR3BP02814 79 aaPredicted RBP11.9□□□□□ -0.5
MMP28-207ENST00000619655 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
MMP28-207ENST00000619655 A8MWP4 228 aa11.89□□□□□ -0.51
MMP28-207ENST00000619655 Q96NJ1 140 aa11.89□□□□□ -0.51
MMP28-207ENST00000619655 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
MMP28-207ENST00000619655 A0A0U1RQV1 116 aa11.86□□□□□ -0.51
MMP28-207ENST00000619655 KRTAP13-2Q52LG2 175 aa11.85□□□□□ -0.51
MMP28-207ENST00000619655 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
MMP28-207ENST00000619655 KRTAP1-4P0C5Y4 121 aa11.82□□□□□ -0.52
MMP28-207ENST00000619655 NDUFB1O75438 58 aa11.82□□□□□ -0.52
MMP28-207ENST00000619655 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
MMP28-207ENST00000619655 CASC2Q6XLA1 102 aa11.8□□□□□ -0.52
MMP28-207ENST00000619655 APOBP04114 4563 aaKnown RBP11.79□□□□□ -0.52
MMP28-207ENST00000619655 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms