RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 Q5VV11 94 aa8.62□□□□□ -1.03
PCDHA11-202ENST00000616325 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
PCDHA11-202ENST00000616325 NDUFB1O75438 58 aa8.61□□□□□ -1.03
PCDHA11-202ENST00000616325 Q6ZRX8 168 aa8.61□□□□□ -1.03
PCDHA11-202ENST00000616325 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
PCDHA11-202ENST00000616325 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
PCDHA11-202ENST00000616325 ANK2Q01484 3957 aa8.6□□□□□ -1.03
PCDHA11-202ENST00000616325 H0Y9P7 68 aa8.6□□□□□ -1.03
PCDHA11-202ENST00000616325 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
PCDHA11-202ENST00000616325 PRLHP81277 87 aa8.6□□□□□ -1.03
PCDHA11-202ENST00000616325 UBE2AP49459 152 aa8.59□□□□□ -1.03
PCDHA11-202ENST00000616325 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
PCDHA11-202ENST00000616325 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
PCDHA11-202ENST00000616325 CD164Q04900 197 aa8.59□□□□□ -1.03
PCDHA11-202ENST00000616325 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
PCDHA11-202ENST00000616325 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
PCDHA11-202ENST00000616325 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
PCDHA11-202ENST00000616325 H0Y9J4 135 aa8.55□□□□□ -1.04
PCDHA11-202ENST00000616325 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
PCDHA11-202ENST00000616325 LCE6AA0A183 80 aa8.54□□□□□ -1.04
PCDHA11-202ENST00000616325 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
PCDHA11-202ENST00000616325 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
PCDHA11-202ENST00000616325 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
PCDHA11-202ENST00000616325 IGFL1Q6UW32 110 aa8.52□□□□□ -1.04
PCDHA11-202ENST00000616325 LIMD2Q9BT23 127 aa8.52□□□□□ -1.04
PCDHA11-202ENST00000616325 LINC00588Q9Y4M8 146 aa8.52□□□□□ -1.04
PCDHA11-202ENST00000616325 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
PCDHA11-202ENST00000616325 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
PCDHA11-202ENST00000616325 KTN1-AS1Q86SY8 53 aa8.51□□□□□ -1.05
PCDHA11-202ENST00000616325 LCA10Q71F78 164 aa8.5□□□□□ -1.05
PCDHA11-202ENST00000616325 TNP2Q05952 138 aa8.5□□□□□ -1.05
PCDHA11-202ENST00000616325 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
PCDHA11-202ENST00000616325 COA5Q86WW8 74 aa8.48□□□□□ -1.05
PCDHA11-202ENST00000616325 NDUFS5O43920 106 aa8.47□□□□□ -1.05
PCDHA11-202ENST00000616325 A0A1B0GW54 56 aa8.47□□□□□ -1.05
PCDHA11-202ENST00000616325 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
PCDHA11-202ENST00000616325 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
PCDHA11-202ENST00000616325 H3BNG1 76 aa8.44□□□□□ -1.06
PCDHA11-202ENST00000616325 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
PCDHA11-202ENST00000616325 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
PCDHA11-202ENST00000616325 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
PCDHA11-202ENST00000616325 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
PCDHA11-202ENST00000616325 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
PCDHA11-202ENST00000616325 LYSTQ99698 3801 aa8.42□□□□□ -1.06
PCDHA11-202ENST00000616325 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
PCDHA11-202ENST00000616325 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.07
PCDHA11-202ENST00000616325 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
PCDHA11-202ENST00000616325 SPRR1AP35321 89 aa8.38□□□□□ -1.07
PCDHA11-202ENST00000616325 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
PCDHA11-202ENST00000616325 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
PCDHA11-202ENST00000616325 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
PCDHA11-202ENST00000616325 SPINK7P58062 85 aa8.36□□□□□ -1.07
PCDHA11-202ENST00000616325 Q75L30 129 aa8.35□□□□□ -1.07
PCDHA11-202ENST00000616325 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
PCDHA11-202ENST00000616325 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
PCDHA11-202ENST00000616325 MOBPQ13875 183 aa8.34□□□□□ -1.07
PCDHA11-202ENST00000616325 A8MWP4 228 aa8.34□□□□□ -1.07
PCDHA11-202ENST00000616325 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
PCDHA11-202ENST00000616325 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
PCDHA11-202ENST00000616325 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
PCDHA11-202ENST00000616325 A6NN06 94 aa8.32□□□□□ -1.08
PCDHA11-202ENST00000616325 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
PCDHA11-202ENST00000616325 C9orf163Q8N9P6 203 aa8.31□□□□□ -1.08
PCDHA11-202ENST00000616325 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
PCDHA11-202ENST00000616325 H3BPC8 53 aa8.31□□□□□ -1.08
PCDHA11-202ENST00000616325 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
PCDHA11-202ENST00000616325 IGLV7-46A0A075B6I9 117 aa8.29□□□□□ -1.08
PCDHA11-202ENST00000616325 PRR26Q8N8Z3 221 aa8.29□□□□□ -1.08
PCDHA11-202ENST00000616325 PLA2G2DQ9UNK4 145 aa8.29□□□□□ -1.08
PCDHA11-202ENST00000616325 K7EIL1 84 aa8.26□□□□□ -1.09
PCDHA11-202ENST00000616325 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
PCDHA11-202ENST00000616325 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
PCDHA11-202ENST00000616325 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
PCDHA11-202ENST00000616325 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
PCDHA11-202ENST00000616325 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
PCDHA11-202ENST00000616325 HRES1P13985 223 aa8.23□□□□□ -1.09
PCDHA11-202ENST00000616325 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
PCDHA11-202ENST00000616325 TGP01266 2768 aa8.22□□□□□ -1.09
PCDHA11-202ENST00000616325 PANO1I0J062 215 aa8.22□□□□□ -1.09
PCDHA11-202ENST00000616325 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
PCDHA11-202ENST00000616325 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
PCDHA11-202ENST00000616325 LINC00313P59037 77 aa8.21□□□□□ -1.09
PCDHA11-202ENST00000616325 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
PCDHA11-202ENST00000616325 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
PCDHA11-202ENST00000616325 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
PCDHA11-202ENST00000616325 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
PCDHA11-202ENST00000616325 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
PCDHA11-202ENST00000616325 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
PCDHA11-202ENST00000616325 A0A087X002 238 aa8.13□□□□□ -1.11
PCDHA11-202ENST00000616325 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
PCDHA11-202ENST00000616325 MDFIQ99750 246 aa8.12□□□□□ -1.11
PCDHA11-202ENST00000616325 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
PCDHA11-202ENST00000616325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
PCDHA11-202ENST00000616325 DNAH9Q9NYC9 4486 aa8.11□□□□□ -1.11
PCDHA11-202ENST00000616325 C14orf177Q52M58 125 aa8.09□□□□□ -1.12
PCDHA11-202ENST00000616325 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.12
PCDHA11-202ENST00000616325 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
PCDHA11-202ENST00000616325 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
PCDHA11-202ENST00000616325 A0A1B0GU69 56 aa8.06□□□□□ -1.12
PCDHA11-202ENST00000616325 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms