RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
PPP4R3B-205ENST00000616288 MUC3AQ02505 3323 aa8.7□□□□□ -1.02
PPP4R3B-205ENST00000616288 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
PPP4R3B-205ENST00000616288 TEX15Q9BXT5 2789 aa8.66□□□□□ -1.02
PPP4R3B-205ENST00000616288 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
PPP4R3B-205ENST00000616288 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.02
PPP4R3B-205ENST00000616288 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.02
PPP4R3B-205ENST00000616288 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
PPP4R3B-205ENST00000616288 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
PPP4R3B-205ENST00000616288 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
PPP4R3B-205ENST00000616288 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
PPP4R3B-205ENST00000616288 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
PPP4R3B-205ENST00000616288 HRES1P13985 223 aa8.63□□□□□ -1.03
PPP4R3B-205ENST00000616288 ZANQ9Y493 2812 aa8.63□□□□□ -1.03
PPP4R3B-205ENST00000616288 LCE6AA0A183 80 aa8.62□□□□□ -1.03
PPP4R3B-205ENST00000616288 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
PPP4R3B-205ENST00000616288 HELZ2Q9BYK8 2649 aaKnown RBP8.62□□□□□ -1.03
PPP4R3B-205ENST00000616288 MRPL34Q9BQ48 92 aaKnown RBP8.62□□□□□ -1.03
PPP4R3B-205ENST00000616288 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 FBN2P35556 2912 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 ZNF292O60281 2723 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
PPP4R3B-205ENST00000616288 NOTCH1P46531 2555 aa8.58□□□□□ -1.04
PPP4R3B-205ENST00000616288 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
PPP4R3B-205ENST00000616288 CRYBG3Q68DQ2 2970 aa8.57□□□□□ -1.04
PPP4R3B-205ENST00000616288 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
PPP4R3B-205ENST00000616288 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 ZFHX3Q15911 3703 aa8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 CFAP46Q8IYW2 2715 aa8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 OXLD1Q5BKU9 147 aa8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 ATRQ13535 2644 aa8.54□□□□□ -1.04
PPP4R3B-205ENST00000616288 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
PPP4R3B-205ENST00000616288 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
PPP4R3B-205ENST00000616288 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
PPP4R3B-205ENST00000616288 TNP2Q05952 138 aa8.5□□□□□ -1.05
PPP4R3B-205ENST00000616288 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
PPP4R3B-205ENST00000616288 NF1P21359 2839 aa8.49□□□□□ -1.05
PPP4R3B-205ENST00000616288 CASC10Q5T4H9 136 aa8.48□□□□□ -1.05
PPP4R3B-205ENST00000616288 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
PPP4R3B-205ENST00000616288 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
PPP4R3B-205ENST00000616288 RTL8CO15255 209 aa8.47□□□□□ -1.05
PPP4R3B-205ENST00000616288 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.05
PPP4R3B-205ENST00000616288 ITPR3Q14573 2671 aa8.46□□□□□ -1.05
PPP4R3B-205ENST00000616288 SMR3AQ99954 134 aa8.45□□□□□ -1.06
PPP4R3B-205ENST00000616288 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
PPP4R3B-205ENST00000616288 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
PPP4R3B-205ENST00000616288 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
PPP4R3B-205ENST00000616288 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
PPP4R3B-205ENST00000616288 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
PPP4R3B-205ENST00000616288 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
PPP4R3B-205ENST00000616288 SPRR1AP35321 89 aa8.41□□□□□ -1.06
PPP4R3B-205ENST00000616288 MXRA5Q9NR99 2828 aa8.41□□□□□ -1.06
PPP4R3B-205ENST00000616288 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
PPP4R3B-205ENST00000616288 H3BNG1 76 aa8.39□□□□□ -1.07
PPP4R3B-205ENST00000616288 K7EIL1 84 aa8.38□□□□□ -1.07
PPP4R3B-205ENST00000616288 CELSR2Q9HCU4 2923 aa8.38□□□□□ -1.07
PPP4R3B-205ENST00000616288 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
PPP4R3B-205ENST00000616288 UBR5O95071 2799 aaPredicted RBP8.38□□□□□ -1.07
PPP4R3B-205ENST00000616288 INAFM1C9JVW0 142 aa8.38□□□□□ -1.07
PPP4R3B-205ENST00000616288 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
PPP4R3B-205ENST00000616288 FLNCQ14315 2725 aa8.37□□□□□ -1.07
PPP4R3B-205ENST00000616288 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
PPP4R3B-205ENST00000616288 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
PPP4R3B-205ENST00000616288 DNAH10OSP0CZ25 163 aa8.36□□□□□ -1.07
PPP4R3B-205ENST00000616288 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
PPP4R3B-205ENST00000616288 Q6ZR54 194 aa8.33□□□□□ -1.08
PPP4R3B-205ENST00000616288 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
PPP4R3B-205ENST00000616288 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
PPP4R3B-205ENST00000616288 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
PPP4R3B-205ENST00000616288 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
PPP4R3B-205ENST00000616288 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
PPP4R3B-205ENST00000616288 Q8N1X5 172 aa8.27□□□□□ -1.08
PPP4R3B-205ENST00000616288 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
PPP4R3B-205ENST00000616288 STAB1Q9NY15 2570 aa8.23□□□□□ -1.09
PPP4R3B-205ENST00000616288 KRTAP10-3P60369 221 aa8.22□□□□□ -1.09
PPP4R3B-205ENST00000616288 ROMO1P60602 79 aa8.19□□□□□ -1.1
PPP4R3B-205ENST00000616288 A0A087X002 238 aa8.19□□□□□ -1.1
PPP4R3B-205ENST00000616288 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
PPP4R3B-205ENST00000616288 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
PPP4R3B-205ENST00000616288 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
PPP4R3B-205ENST00000616288 Q5W150 140 aa8.18□□□□□ -1.1
PPP4R3B-205ENST00000616288 FLNBO75369 2602 aaKnown RBP8.17□□□□□ -1.1
PPP4R3B-205ENST00000616288 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
PPP4R3B-205ENST00000616288 Q96NJ1 140 aa8.16□□□□□ -1.1
PPP4R3B-205ENST00000616288 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
PPP4R3B-205ENST00000616288 MAST4O15021 2626 aa8.16□□□□□ -1.1
PPP4R3B-205ENST00000616288 A0A1B0GU33 70 aa8.15□□□□□ -1.1
PPP4R3B-205ENST00000616288 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.11
PPP4R3B-205ENST00000616288 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
PPP4R3B-205ENST00000616288 A0A0D9SG42 100 aa8.13□□□□□ -1.11
PPP4R3B-205ENST00000616288 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
PPP4R3B-205ENST00000616288 SPRR1BP22528 89 aa8.12□□□□□ -1.11
PPP4R3B-205ENST00000616288 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
PPP4R3B-205ENST00000616288 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
PPP4R3B-205ENST00000616288 ZNF861PO60384 105 aa8.07□□□□□ -1.12
PPP4R3B-205ENST00000616288 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms