RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
PDLIM5-222ENST00000615540 LIMD2Q9BT23 127 aa5.65□□□□□ -1.5
PDLIM5-222ENST00000615540 LINC01600Q96MT4 127 aa5.65□□□□□ -1.51
PDLIM5-222ENST00000615540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.51
PDLIM5-222ENST00000615540 KRTAP26-1Q6PEX3 210 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 IGLV5-37A0A075B6J1 123 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 GCN1Q92616 2671 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 HELZ2Q9BYK8 2649 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 V9GYY9 64 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 A0A1B0GW54 56 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 DSCR10P59022 87 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
PDLIM5-222ENST00000615540 TENM4Q6N022 2769 aa5.63□□□□□ -1.51
PDLIM5-222ENST00000615540 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-222ENST00000615540 LINC00313P59037 77 aa5.62□□□□□ -1.51
PDLIM5-222ENST00000615540 APCP25054 2843 aa5.62□□□□□ -1.51
PDLIM5-222ENST00000615540 ZNF861PO60384 105 aa5.61□□□□□ -1.51
PDLIM5-222ENST00000615540 C7orf65Q6ZTY9 151 aa5.61□□□□□ -1.51
PDLIM5-222ENST00000615540 TNP2Q05952 138 aa5.61□□□□□ -1.51
PDLIM5-222ENST00000615540 Q96NJ1 140 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 ATRQ13535 2644 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
PDLIM5-222ENST00000615540 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
PDLIM5-222ENST00000615540 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
PDLIM5-222ENST00000615540 SPAG11AQ6PDA7 123 aa5.59□□□□□ -1.52
PDLIM5-222ENST00000615540 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.52
PDLIM5-222ENST00000615540 IGLV5-48A0A075B6I7 105 aa5.58□□□□□ -1.52
PDLIM5-222ENST00000615540 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
PDLIM5-222ENST00000615540 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
PDLIM5-222ENST00000615540 NF1P21359 2839 aa5.57□□□□□ -1.52
PDLIM5-222ENST00000615540 H7BZZ5 65 aa5.57□□□□□ -1.52
PDLIM5-222ENST00000615540 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-222ENST00000615540 SETXQ7Z333 2677 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-222ENST00000615540 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
PDLIM5-222ENST00000615540 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
PDLIM5-222ENST00000615540 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-222ENST00000615540 C1orf195Q5TG92 126 aa5.54□□□□□ -1.52
PDLIM5-222ENST00000615540 KLKP1Q107X0 134 aa5.54□□□□□ -1.52
PDLIM5-222ENST00000615540 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
PDLIM5-222ENST00000615540 ITPR2Q14571 2701 aa5.52□□□□□ -1.53
PDLIM5-222ENST00000615540 PANO1I0J062 215 aa5.52□□□□□ -1.53
PDLIM5-222ENST00000615540 COA5Q86WW8 74 aa5.52□□□□□ -1.53
PDLIM5-222ENST00000615540 SPRR1AP35321 89 aa5.51□□□□□ -1.53
PDLIM5-222ENST00000615540 LYSTQ99698 3801 aa5.51□□□□□ -1.53
PDLIM5-222ENST00000615540 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
PDLIM5-222ENST00000615540 H3BPC8 53 aa5.5□□□□□ -1.53
PDLIM5-222ENST00000615540 ACYP2P14621 99 aa5.5□□□□□ -1.53
PDLIM5-222ENST00000615540 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
PDLIM5-222ENST00000615540 UBR5O95071 2799 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-222ENST00000615540 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
PDLIM5-222ENST00000615540 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
PDLIM5-222ENST00000615540 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
PDLIM5-222ENST00000615540 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.53
PDLIM5-222ENST00000615540 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
PDLIM5-222ENST00000615540 MAST4O15021 2626 aa5.47□□□□□ -1.53
PDLIM5-222ENST00000615540 A8MUN3 132 aa5.47□□□□□ -1.53
PDLIM5-222ENST00000615540 A0A1B0GU69 56 aa5.46□□□□□ -1.53
PDLIM5-222ENST00000615540 KRTAP11-1Q8IUC1 163 aa5.46□□□□□ -1.53
PDLIM5-222ENST00000615540 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
PDLIM5-222ENST00000615540 KRTAP10-2P60368 255 aa5.45□□□□□ -1.54
PDLIM5-222ENST00000615540 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
PDLIM5-222ENST00000615540 PLAC8Q9NZF1 115 aa5.45□□□□□ -1.54
PDLIM5-222ENST00000615540 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
PDLIM5-222ENST00000615540 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
PDLIM5-222ENST00000615540 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
PDLIM5-222ENST00000615540 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
PDLIM5-222ENST00000615540 MGAM2Q2M2H8 2515 aa5.43□□□□□ -1.54
PDLIM5-222ENST00000615540 UNC79Q9P2D8 2635 aa5.43□□□□□ -1.54
PDLIM5-222ENST00000615540 ANK2Q01484 3957 aa5.42□□□□□ -1.54
PDLIM5-222ENST00000615540 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
PDLIM5-222ENST00000615540 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
PDLIM5-222ENST00000615540 PDZD2O15018 2839 aa5.41□□□□□ -1.54
PDLIM5-222ENST00000615540 FBN1P35555 2871 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-222ENST00000615540 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
PDLIM5-222ENST00000615540 MMP24-AS1A0A0U1RRL7 71 aa5.41□□□□□ -1.54
PDLIM5-222ENST00000615540 K7ERS5 55 aa5.4□□□□□ -1.55
PDLIM5-222ENST00000615540 KRTAP10-1P60331 282 aa5.4□□□□□ -1.55
PDLIM5-222ENST00000615540 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
PDLIM5-222ENST00000615540 Q8N1X5 172 aa5.39□□□□□ -1.55
PDLIM5-222ENST00000615540 ATP11AUNQ6ZP68 121 aa5.38□□□□□ -1.55
PDLIM5-222ENST00000615540 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
PDLIM5-222ENST00000615540 OXTP01178 125 aa5.36□□□□□ -1.55
PDLIM5-222ENST00000615540 STAB1Q9NY15 2570 aa5.35□□□□□ -1.55
PDLIM5-222ENST00000615540 SPRR1BP22528 89 aa5.35□□□□□ -1.55
PDLIM5-222ENST00000615540 Q5XG85 94 aa5.34□□□□□ -1.55
PDLIM5-222ENST00000615540 Q6ZRN7 208 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-222ENST00000615540 OTOGQ6ZRI0 2925 aa5.34□□□□□ -1.56
PDLIM5-222ENST00000615540 CD164Q04900 197 aa5.33□□□□□ -1.56
PDLIM5-222ENST00000615540 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
PDLIM5-222ENST00000615540 Q6ZR54 194 aa5.32□□□□□ -1.56
PDLIM5-222ENST00000615540 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
PDLIM5-222ENST00000615540 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
PDLIM5-222ENST00000615540 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-222ENST00000615540 NOTCH1P46531 2555 aa5.31□□□□□ -1.56
PDLIM5-222ENST00000615540 HRES1P13985 223 aa5.29□□□□□ -1.56
PDLIM5-222ENST00000615540 COL6A5A8TX70 2615 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms