RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TSPEAR-AS2P59090 65 aa3.17□□□□□ -1.9
MUC1-227ENST00000615517 ELOF1P60002 83 aaKnown RBP3.17□□□□□ -1.9
MUC1-227ENST00000615517 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
MUC1-227ENST00000615517 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
MUC1-227ENST00000615517 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
MUC1-227ENST00000615517 TRBV7-7A0A0K0K1E9 115 aa3.16□□□□□ -1.9
MUC1-227ENST00000615517 H0Y8G0 127 aa3.16□□□□□ -1.9
MUC1-227ENST00000615517 COX7BP24311 80 aa3.16□□□□□ -1.9
MUC1-227ENST00000615517 NPC2P61916 151 aa3.16□□□□□ -1.9
MUC1-227ENST00000615517 PMCHL1Q16048 86 aa3.16□□□□□ -1.9
MUC1-227ENST00000615517 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
MUC1-227ENST00000615517 TCTE3Q8IZS6 198 aa3.15□□□□□ -1.91
MUC1-227ENST00000615517 MIEN1Q9BRT3 115 aa3.15□□□□□ -1.91
MUC1-227ENST00000615517 SMCO4Q9NRQ5 59 aa3.15□□□□□ -1.91
MUC1-227ENST00000615517 PEA15Q15121 130 aa3.14□□□□□ -1.91
MUC1-227ENST00000615517 COMMD7Q86VX2 200 aa3.14□□□□□ -1.91
MUC1-227ENST00000615517 DSCR10P59022 87 aa3.13□□□□□ -1.91
MUC1-227ENST00000615517 ADAMTSL4-AS1Q5T5F5 129 aa3.13□□□□□ -1.91
MUC1-227ENST00000615517 SLC7A5P1Q8MH63 180 aa3.13□□□□□ -1.91
MUC1-227ENST00000615517 CBY1Q9Y3M2 126 aa3.13□□□□□ -1.91
MUC1-227ENST00000615517 SPRR2DP22532 72 aa3.12□□□□□ -1.91
MUC1-227ENST00000615517 RHEBQ15382 184 aa3.12□□□□□ -1.91
MUC1-227ENST00000615517 MTURNQ8N3F0 131 aa3.12□□□□□ -1.91
MUC1-227ENST00000615517 OR13C6PQ8NH95 151 aa3.12□□□□□ -1.91
MUC1-227ENST00000615517 TRAV12-1A0A0B4J245 112 aa3.11□□□□□ -1.91
MUC1-227ENST00000615517 LST1O00453 97 aa3.11□□□□□ -1.91
MUC1-227ENST00000615517 MT-ND4LP03901 98 aa3.11□□□□□ -1.91
MUC1-227ENST00000615517 LEPROTO15243 131 aa3.1□□□□□ -1.91
MUC1-227ENST00000615517 LINC00614P0C842 121 aa3.1□□□□□ -1.91
MUC1-227ENST00000615517 CLEC2BQ92478 149 aa3.1□□□□□ -1.91
MUC1-227ENST00000615517 IFITM2Q01629 132 aa3.09□□□□□ -1.91
MUC1-227ENST00000615517 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
MUC1-227ENST00000615517 Q5VV11 94 aa3.09□□□□□ -1.91
MUC1-227ENST00000615517 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
MUC1-227ENST00000615517 TRBV7-6A0A0J9YX20 115 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 J3QQQ9 107 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 Q6JHZ5 121 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 LINC00518Q8N0U6 118 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 C18orf32Q8TCD1 76 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 SPANXCQ9NY87 97 aa3.08□□□□□ -1.92
MUC1-227ENST00000615517 A0A0J9YXY3 114 aa3.07□□□□□ -1.92
MUC1-227ENST00000615517 PCP4L1A6NKN8 68 aa3.07□□□□□ -1.92
MUC1-227ENST00000615517 F8WEM9 126 aa3.07□□□□□ -1.92
MUC1-227ENST00000615517 FABP9Q0Z7S8 132 aa3.07□□□□□ -1.92
MUC1-227ENST00000615517 LINC00308Q8TCZ7 52 aa3.07□□□□□ -1.92
MUC1-227ENST00000615517 LOC105371267A0A1B0GV96 52 aa3.06□□□□□ -1.92
MUC1-227ENST00000615517 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
MUC1-227ENST00000615517 NMUP48645 174 aa3.06□□□□□ -1.92
MUC1-227ENST00000615517 IFI27L1Q96BM0 104 aa3.06□□□□□ -1.92
MUC1-227ENST00000615517 LITAFQ99732 161 aa3.06□□□□□ -1.92
MUC1-227ENST00000615517 A0A1W2PNM2 257 aa3.05□□□□□ -1.92
MUC1-227ENST00000615517 COLCA2A8K830 154 aa3.04□□□□□ -1.92
MUC1-227ENST00000615517 SPINK7P58062 85 aa3.04□□□□□ -1.92
MUC1-227ENST00000615517 LINC00313P59037 77 aa3.04□□□□□ -1.92
MUC1-227ENST00000615517 OCIAD2Q56VL3 154 aa3.04□□□□□ -1.92
MUC1-227ENST00000615517 SEC11CQ9BY50 192 aa3.04□□□□□ -1.92
MUC1-227ENST00000615517 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
MUC1-227ENST00000615517 SEC61GP60059 68 aa3.03□□□□□ -1.92
MUC1-227ENST00000615517 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
MUC1-227ENST00000615517 TRAV13-2A0A0B4J235 113 aa3.02□□□□□ -1.93
MUC1-227ENST00000615517 NDUFA5Q16718 116 aa3.02□□□□□ -1.93
MUC1-227ENST00000615517 Q6ZVQ6 151 aa3.02□□□□□ -1.93
MUC1-227ENST00000615517 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
MUC1-227ENST00000615517 ZNF815PA8K554 130 aa3.01□□□□□ -1.93
MUC1-227ENST00000615517 H3BUT2 72 aa3.01□□□□□ -1.93
MUC1-227ENST00000615517 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
MUC1-227ENST00000615517 SS18L2Q9UHA2 77 aa3.01□□□□□ -1.93
MUC1-227ENST00000615517 COX19Q49B96 90 aa3□□□□□ -1.93
MUC1-227ENST00000615517 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
MUC1-227ENST00000615517 NHP2Q9NX24 153 aaKnown RBP3□□□□□ -1.93
MUC1-227ENST00000615517 SERF1AO75920 110 aa2.99□□□□□ -1.93
MUC1-227ENST00000615517 HERVK_113P61574 105 aa2.99□□□□□ -1.93
MUC1-227ENST00000615517 Q6ZQY7 126 aa2.99□□□□□ -1.93
MUC1-227ENST00000615517 SIGMAR1Q99720 223 aa2.99□□□□□ -1.93
MUC1-227ENST00000615517 PMCHL2Q9BQD1 86 aa2.99□□□□□ -1.93
MUC1-227ENST00000615517 A0A087WSZ3 146 aa2.98□□□□□ -1.93
MUC1-227ENST00000615517 TIMM17BO60830 172 aa2.98□□□□□ -1.93
MUC1-227ENST00000615517 S100A1P23297 94 aa2.98□□□□□ -1.93
MUC1-227ENST00000615517 ZCCHC13Q8WW36 166 aaKnown RBP2.98□□□□□ -1.93
MUC1-227ENST00000615517 TRAPPC1Q9Y5R8 145 aa2.98□□□□□ -1.93
MUC1-227ENST00000615517 S100A6P06703 90 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 S100PP25815 95 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 PLNP26678 52 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 LINC00575Q6W349 94 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 SMIM11BQ8TCY0 68 aa2.97□□□□□ -1.93
MUC1-227ENST00000615517 A6NDN8 102 aa2.96□□□□□ -1.94
MUC1-227ENST00000615517 E9PLD3 99 aa2.96□□□□□ -1.94
MUC1-227ENST00000615517 DPM2O94777 84 aa2.96□□□□□ -1.94
MUC1-227ENST00000615517 TEN1Q86WV5 123 aa2.96□□□□□ -1.94
MUC1-227ENST00000615517 CHCHD1Q96BP2 118 aaKnown RBP2.96□□□□□ -1.94
MUC1-227ENST00000615517 IMUPQ9GZP8 106 aa2.96□□□□□ -1.94
MUC1-227ENST00000615517 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
MUC1-227ENST00000615517 IGKCP01834 107 aa2.95□□□□□ -1.94
MUC1-227ENST00000615517 IGKV4-1P06312 121 aa2.95□□□□□ -1.94
MUC1-227ENST00000615517 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
MUC1-227ENST00000615517 FAM236AA0A1B0GUQ0 79 aa2.94□□□□□ -1.94
MUC1-227ENST00000615517 FAM236BA0A1B0GV22 79 aa2.94□□□□□ -1.94
MUC1-227ENST00000615517 hADV29S1A0JD25 119 aa2.94□□□□□ -1.94
MUC1-227ENST00000615517 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms