RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CHD1-212ENST00000614616 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
CHD1-212ENST00000614616 CHD7Q9P2D1 2997 aa8.59□□□□□ -1.03
CHD1-212ENST00000614616 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
CHD1-212ENST00000614616 KALRNO60229 2985 aa8.58□□□□□ -1.04
CHD1-212ENST00000614616 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
CHD1-212ENST00000614616 APCP25054 2843 aa8.57□□□□□ -1.04
CHD1-212ENST00000614616 BRCA2P51587 3418 aa8.56□□□□□ -1.04
CHD1-212ENST00000614616 Q6ZR54 194 aa8.55□□□□□ -1.04
CHD1-212ENST00000614616 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
CHD1-212ENST00000614616 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
CHD1-212ENST00000614616 Q5W150 140 aa8.53□□□□□ -1.04
CHD1-212ENST00000614616 SPRR1AP35321 89 aa8.53□□□□□ -1.04
CHD1-212ENST00000614616 ITPR1Q14643 2758 aa8.52□□□□□ -1.04
CHD1-212ENST00000614616 Q8NDZ9 215 aa8.52□□□□□ -1.05
CHD1-212ENST00000614616 LAMA1P25391 3075 aa8.51□□□□□ -1.05
CHD1-212ENST00000614616 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CHD1-212ENST00000614616 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
CHD1-212ENST00000614616 TNP2Q05952 138 aa8.48□□□□□ -1.05
CHD1-212ENST00000614616 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
CHD1-212ENST00000614616 ITPR3Q14573 2671 aa8.47□□□□□ -1.05
CHD1-212ENST00000614616 LAMA3Q16787 3333 aa8.47□□□□□ -1.05
CHD1-212ENST00000614616 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
CHD1-212ENST00000614616 A0A087X002 238 aa8.47□□□□□ -1.05
CHD1-212ENST00000614616 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.05
CHD1-212ENST00000614616 A0A087WTM6 91 aa8.46□□□□□ -1.06
CHD1-212ENST00000614616 UNC80Q8N2C7 3258 aa8.45□□□□□ -1.06
CHD1-212ENST00000614616 NBEAQ8NFP9 2946 aa8.45□□□□□ -1.06
CHD1-212ENST00000614616 UNC79Q9P2D8 2635 aa8.44□□□□□ -1.06
CHD1-212ENST00000614616 LCE6AA0A183 80 aa8.43□□□□□ -1.06
CHD1-212ENST00000614616 CASC10Q5T4H9 136 aa8.43□□□□□ -1.06
CHD1-212ENST00000614616 CFAP46Q8IYW2 2715 aa8.43□□□□□ -1.06
CHD1-212ENST00000614616 LRBAP50851 2863 aa8.43□□□□□ -1.06
CHD1-212ENST00000614616 S4R3F8 94 aa8.42□□□□□ -1.06
CHD1-212ENST00000614616 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
CHD1-212ENST00000614616 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
CHD1-212ENST00000614616 TACC2O95359 2948 aa8.41□□□□□ -1.06
CHD1-212ENST00000614616 ATRQ13535 2644 aa8.4□□□□□ -1.06
CHD1-212ENST00000614616 HELZ2Q9BYK8 2649 aaKnown RBP8.4□□□□□ -1.07
CHD1-212ENST00000614616 KRTAP10-11P60412 298 aa8.4□□□□□ -1.07
CHD1-212ENST00000614616 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
CHD1-212ENST00000614616 SPRR1BP22528 89 aa8.39□□□□□ -1.07
CHD1-212ENST00000614616 PRUNE2Q8WUY3 3088 aa8.37□□□□□ -1.07
CHD1-212ENST00000614616 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
CHD1-212ENST00000614616 HECTD1Q9ULT8 2610 aa8.36□□□□□ -1.07
CHD1-212ENST00000614616 VCANP13611 3396 aa8.35□□□□□ -1.07
CHD1-212ENST00000614616 MGAM2Q2M2H8 2515 aa8.35□□□□□ -1.07
CHD1-212ENST00000614616 COX6B2Q6YFQ2 88 aa8.34□□□□□ -1.07
CHD1-212ENST00000614616 WDFY4Q6ZS81 3184 aa8.34□□□□□ -1.08
CHD1-212ENST00000614616 NDUFAF8A1L188 74 aa8.31□□□□□ -1.08
CHD1-212ENST00000614616 FRYLO94915 3013 aa8.31□□□□□ -1.08
CHD1-212ENST00000614616 TEX15Q9BXT5 2789 aa8.31□□□□□ -1.08
CHD1-212ENST00000614616 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
CHD1-212ENST00000614616 NBEAL2Q6ZNJ1 2754 aa8.3□□□□□ -1.08
CHD1-212ENST00000614616 ASH1LQ9NR48 2969 aaKnown RBP8.3□□□□□ -1.08
CHD1-212ENST00000614616 COL6A5A8TX70 2615 aa8.29□□□□□ -1.08
CHD1-212ENST00000614616 WDFY3Q8IZQ1 3526 aa8.29□□□□□ -1.08
CHD1-212ENST00000614616 COL6A3P12111 3177 aa8.28□□□□□ -1.08
CHD1-212ENST00000614616 NOTCH1P46531 2555 aa8.28□□□□□ -1.08
CHD1-212ENST00000614616 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
CHD1-212ENST00000614616 ZZEF1O43149 2961 aa8.26□□□□□ -1.09
CHD1-212ENST00000614616 A8MU10 97 aa8.25□□□□□ -1.09
CHD1-212ENST00000614616 KRTAP10-3P60369 221 aa8.25□□□□□ -1.09
CHD1-212ENST00000614616 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
CHD1-212ENST00000614616 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
CHD1-212ENST00000614616 DMXL1Q9Y485 3027 aa8.24□□□□□ -1.09
CHD1-212ENST00000614616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
CHD1-212ENST00000614616 K7EIL1 84 aa8.23□□□□□ -1.09
CHD1-212ENST00000614616 KRTAP4-16G5E9R7 235 aaPredicted RBP8.22□□□□□ -1.09
CHD1-212ENST00000614616 KRTAP24-1Q3LI83 254 aa8.21□□□□□ -1.1
CHD1-212ENST00000614616 PANO1I0J062 215 aa8.2□□□□□ -1.1
CHD1-212ENST00000614616 BOD1L1Q8NFC6 3051 aa8.2□□□□□ -1.1
CHD1-212ENST00000614616 R4GN34 69 aa8.2□□□□□ -1.1
CHD1-212ENST00000614616 HTTP42858 3142 aa8.19□□□□□ -1.1
CHD1-212ENST00000614616 PLAC8Q9NZF1 115 aa8.17□□□□□ -1.1
CHD1-212ENST00000614616 MAST4O15021 2626 aa8.17□□□□□ -1.1
CHD1-212ENST00000614616 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
CHD1-212ENST00000614616 UBR5O95071 2799 aaPredicted RBP8.17□□□□□ -1.1
CHD1-212ENST00000614616 UTP20O75691 2785 aaKnown RBP8.16□□□□□ -1.1
CHD1-212ENST00000614616 Q6ZSA8 131 aa8.16□□□□□ -1.1
CHD1-212ENST00000614616 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
CHD1-212ENST00000614616 ZFHX3Q15911 3703 aa8.15□□□□□ -1.11
CHD1-212ENST00000614616 ITPR2Q14571 2701 aa8.14□□□□□ -1.11
CHD1-212ENST00000614616 NSD1Q96L73 2696 aaPredicted RBP8.14□□□□□ -1.11
CHD1-212ENST00000614616 COL12A1Q99715 3063 aa8.12□□□□□ -1.11
CHD1-212ENST00000614616 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
CHD1-212ENST00000614616 A8MUU9 505 aa8.11□□□□□ -1.11
CHD1-212ENST00000614616 TEP1Q99973 2627 aaKnown RBP8.1□□□□□ -1.11
CHD1-212ENST00000614616 STAB2Q8WWQ8 2551 aa8.09□□□□□ -1.11
CHD1-212ENST00000614616 SPTBN5Q9NRC6 3674 aaKnown RBP8.08□□□□□ -1.12
CHD1-212ENST00000614616 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
CHD1-212ENST00000614616 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
CHD1-212ENST00000614616 SETXQ7Z333 2677 aaKnown RBP8.06□□□□□ -1.12
CHD1-212ENST00000614616 MYO15AQ9UKN7 3530 aa8.05□□□□□ -1.12
CHD1-212ENST00000614616 STAB1Q9NY15 2570 aa8.05□□□□□ -1.12
CHD1-212ENST00000614616 DCHS1Q96JQ0 3298 aa8.04□□□□□ -1.12
CHD1-212ENST00000614616 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
CHD1-212ENST00000614616 J3QL48 77 aa8.03□□□□□ -1.12
CHD1-212ENST00000614616 M0QZ58 72 aa8.02□□□□□ -1.13
CHD1-212ENST00000614616 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms