RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
SMN2-213ENST00000614240 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
SMN2-213ENST00000614240 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
SMN2-213ENST00000614240 Q6JHZ5 121 aa9.36□□□□□ -0.91
SMN2-213ENST00000614240 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
SMN2-213ENST00000614240 TRBV7-7A0A0K0K1E9 115 aa9.33□□□□□ -0.92
SMN2-213ENST00000614240 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
SMN2-213ENST00000614240 hADV29S1A0JD25 119 aa9.32□□□□□ -0.92
SMN2-213ENST00000614240 Q6ZQY7 126 aa9.32□□□□□ -0.92
SMN2-213ENST00000614240 CLEC2BQ92478 149 aa9.32□□□□□ -0.92
SMN2-213ENST00000614240 OCIAD2Q56VL3 154 aa9.3□□□□□ -0.92
SMN2-213ENST00000614240 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
SMN2-213ENST00000614240 Q75L30 129 aa9.3□□□□□ -0.92
SMN2-213ENST00000614240 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
SMN2-213ENST00000614240 LST1O00453 97 aa9.25□□□□□ -0.93
SMN2-213ENST00000614240 SNRPEP62304 92 aaKnown RBP9.25□□□□□ -0.93
SMN2-213ENST00000614240 Q96NJ1 140 aa9.25□□□□□ -0.93
SMN2-213ENST00000614240 SNHG12Q9BXW3 62 aa9.25□□□□□ -0.93
SMN2-213ENST00000614240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.23□□□□□ -0.93
SMN2-213ENST00000614240 H3BUT2 72 aa9.2□□□□□ -0.94
SMN2-213ENST00000614240 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
SMN2-213ENST00000614240 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
SMN2-213ENST00000614240 SCGB1D1O95968 90 aa9.19□□□□□ -0.94
SMN2-213ENST00000614240 CFC1P0CG37 223 aa9.19□□□□□ -0.94
SMN2-213ENST00000614240 TRBV20-1A0A075B6N2 111 aa9.18□□□□□ -0.94
SMN2-213ENST00000614240 BVES-AS1Q5T3Y7 98 aa9.18□□□□□ -0.94
SMN2-213ENST00000614240 FLGP20930 4061 aaPredicted RBP9.17□□□□□ -0.94
SMN2-213ENST00000614240 SS18L2Q9UHA2 77 aa9.17□□□□□ -0.94
SMN2-213ENST00000614240 C12orf57Q99622 126 aa9.16□□□□□ -0.94
SMN2-213ENST00000614240 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
SMN2-213ENST00000614240 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
SMN2-213ENST00000614240 A8MUU9 505 aa9.11□□□□□ -0.95
SMN2-213ENST00000614240 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.11□□□□□ -0.95
SMN2-213ENST00000614240 SNCGO76070 127 aa9.11□□□□□ -0.95
SMN2-213ENST00000614240 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
SMN2-213ENST00000614240 KRTAP9-7A8MTY7 169 aa9.1□□□□□ -0.95
SMN2-213ENST00000614240 S100A2P29034 98 aa9.1□□□□□ -0.95
SMN2-213ENST00000614240 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
SMN2-213ENST00000614240 A0A087WSZ3 146 aa9.07□□□□□ -0.96
SMN2-213ENST00000614240 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
SMN2-213ENST00000614240 DSCR10P59022 87 aa9.06□□□□□ -0.96
SMN2-213ENST00000614240 HIST1H2BLQ99880 126 aa9.06□□□□□ -0.96
SMN2-213ENST00000614240 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
SMN2-213ENST00000614240 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
SMN2-213ENST00000614240 HIST3H2BBQ8N257 126 aa9.05□□□□□ -0.96
SMN2-213ENST00000614240 LCE2BO14633 110 aa9.04□□□□□ -0.96
SMN2-213ENST00000614240 RAB37Q96AX2 223 aa9.04□□□□□ -0.96
SMN2-213ENST00000614240 H0YGX0 51 aa9.02□□□□□ -0.97
SMN2-213ENST00000614240 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
SMN2-213ENST00000614240 H3BMG7 143 aa9.01□□□□□ -0.97
SMN2-213ENST00000614240 FABP2P12104 132 aa9□□□□□ -0.97
SMN2-213ENST00000614240 GHRHP01286 108 aa8.99□□□□□ -0.97
SMN2-213ENST00000614240 COX8AP10176 69 aa8.98□□□□□ -0.97
SMN2-213ENST00000614240 LINC00313P59037 77 aa8.98□□□□□ -0.97
SMN2-213ENST00000614240 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
SMN2-213ENST00000614240 MT2AP02795 61 aa8.97□□□□□ -0.97
SMN2-213ENST00000614240 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
SMN2-213ENST00000614240 S100A6P06703 90 aa8.95□□□□□ -0.98
SMN2-213ENST00000614240 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
SMN2-213ENST00000614240 A0A0B4J2C4 111 aa8.93□□□□□ -0.98
SMN2-213ENST00000614240 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
SMN2-213ENST00000614240 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
SMN2-213ENST00000614240 DLEU1O43261 78 aa8.93□□□□□ -0.98
SMN2-213ENST00000614240 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
SMN2-213ENST00000614240 A0A1B0GX51 115 aa8.91□□□□□ -0.98
SMN2-213ENST00000614240 USH2AO75445 5202 aa8.9□□□□□ -0.98
SMN2-213ENST00000614240 MT1FP04733 61 aa8.9□□□□□ -0.98
SMN2-213ENST00000614240 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
SMN2-213ENST00000614240 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
SMN2-213ENST00000614240 HRES1P13985 223 aa8.88□□□□□ -0.99
SMN2-213ENST00000614240 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
SMN2-213ENST00000614240 A0A1B0GV72 72 aa8.87□□□□□ -0.99
SMN2-213ENST00000614240 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
SMN2-213ENST00000614240 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
SMN2-213ENST00000614240 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
SMN2-213ENST00000614240 DEFB116Q30KQ4 102 aa8.86□□□□□ -0.99
SMN2-213ENST00000614240 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
SMN2-213ENST00000614240 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
SMN2-213ENST00000614240 SSPOA2VEC9 5147 aa8.85□□□□□ -0.99
SMN2-213ENST00000614240 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
SMN2-213ENST00000614240 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
SMN2-213ENST00000614240 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
SMN2-213ENST00000614240 A6NJY4 79 aa8.83□□□□□ -1
SMN2-213ENST00000614240 DNAL4O96015 105 aa8.83□□□□□ -1
SMN2-213ENST00000614240 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
SMN2-213ENST00000614240 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
SMN2-213ENST00000614240 SPATA45Q537H7 98 aa8.82□□□□□ -1
SMN2-213ENST00000614240 CEND1Q8N111 149 aa8.82□□□□□ -1
SMN2-213ENST00000614240 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
SMN2-213ENST00000614240 TRIAP1O43715 76 aa8.81□□□□□ -1
SMN2-213ENST00000614240 MTURNQ8N3F0 131 aa8.81□□□□□ -1
SMN2-213ENST00000614240 H3BQ85 93 aa8.8□□□□□ -1
SMN2-213ENST00000614240 TRACP01848 142 aa8.8□□□□□ -1
SMN2-213ENST00000614240 LINC00472Q9H8W2 130 aa8.8□□□□□ -1
SMN2-213ENST00000614240 CCKP06307 115 aa8.79□□□□□ -1
SMN2-213ENST00000614240 C2orf91Q6ZV80 131 aa8.79□□□□□ -1
SMN2-213ENST00000614240 FCGBPQ9Y6R7 5405 aaPredicted RBP8.78□□□□□ -1
SMN2-213ENST00000614240 S100A1P23297 94 aa8.78□□□□□ -1
SMN2-213ENST00000614240 VAMP8Q9BV40 100 aa8.77□□□□□ -1.01
SMN2-213ENST00000614240 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms