RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 HIST1H4GQ99525 98 aa12.31□□□□□ -0.44
FAM228B-208ENST00000613899 IGLV8-61A0A075B6I0 122 aa12.3□□□□□ -0.44
FAM228B-208ENST00000613899 BVES-AS1Q5T3Y7 98 aa12.29□□□□□ -0.44
FAM228B-208ENST00000613899 Q6JHZ5 121 aa12.29□□□□□ -0.44
FAM228B-208ENST00000613899 COX8AP10176 69 aa12.28□□□□□ -0.44
FAM228B-208ENST00000613899 C12orf57Q99622 126 aa12.28□□□□□ -0.44
FAM228B-208ENST00000613899 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.27□□□□□ -0.45
FAM228B-208ENST00000613899 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
FAM228B-208ENST00000613899 PPDPFLQ8WWR9 84 aa12.25□□□□□ -0.45
FAM228B-208ENST00000613899 DLEU1O43261 78 aa12.24□□□□□ -0.45
FAM228B-208ENST00000613899 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
FAM228B-208ENST00000613899 TRBV7-7A0A0K0K1E9 115 aa12.21□□□□□ -0.45
FAM228B-208ENST00000613899 RPL37P61927 97 aaKnown RBP12.21□□□□□ -0.45
FAM228B-208ENST00000613899 OCIAD2Q56VL3 154 aa12.21□□□□□ -0.45
FAM228B-208ENST00000613899 LCE2CQ5TA81 110 aa12.21□□□□□ -0.45
FAM228B-208ENST00000613899 KRTAP19-2Q3LHN2 52 aa12.19□□□□□ -0.46
FAM228B-208ENST00000613899 SNHG12Q9BXW3 62 aa12.18□□□□□ -0.46
FAM228B-208ENST00000613899 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
FAM228B-208ENST00000613899 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
FAM228B-208ENST00000613899 CFC1P0CG37 223 aa12.15□□□□□ -0.46
FAM228B-208ENST00000613899 C14orf144Q96I85 54 aa12.15□□□□□ -0.46
FAM228B-208ENST00000613899 HIGD1BQ9P298 99 aa12.15□□□□□ -0.46
FAM228B-208ENST00000613899 SNCGO76070 127 aa12.14□□□□□ -0.47
FAM228B-208ENST00000613899 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
FAM228B-208ENST00000613899 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
FAM228B-208ENST00000613899 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
FAM228B-208ENST00000613899 H0YGX0 51 aa12.11□□□□□ -0.47
FAM228B-208ENST00000613899 KRTAP9-6A0A140TA67 174 aa12.1□□□□□ -0.47
FAM228B-208ENST00000613899 H3BUT2 72 aa12.1□□□□□ -0.47
FAM228B-208ENST00000613899 MT1HP80294 61 aa12.1□□□□□ -0.47
FAM228B-208ENST00000613899 VAMP8Q9BV40 100 aa12.1□□□□□ -0.47
FAM228B-208ENST00000613899 C2orf91Q6ZV80 131 aa12.07□□□□□ -0.48
FAM228B-208ENST00000613899 LST1O00453 97 aa12.06□□□□□ -0.48
FAM228B-208ENST00000613899 SS18L2Q9UHA2 77 aa12.05□□□□□ -0.48
FAM228B-208ENST00000613899 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
FAM228B-208ENST00000613899 A6NJY4 79 aa12.04□□□□□ -0.48
FAM228B-208ENST00000613899 Q6Q795 121 aa12.04□□□□□ -0.48
FAM228B-208ENST00000613899 FAM218AQ96MZ4 157 aa12.04□□□□□ -0.48
FAM228B-208ENST00000613899 CEND1Q8N111 149 aa12.03□□□□□ -0.48
FAM228B-208ENST00000613899 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
FAM228B-208ENST00000613899 GHRHP01286 108 aa12.02□□□□□ -0.49
FAM228B-208ENST00000613899 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
FAM228B-208ENST00000613899 A0A1B0GX51 115 aa12.01□□□□□ -0.49
FAM228B-208ENST00000613899 Q75L30 129 aa12□□□□□ -0.49
FAM228B-208ENST00000613899 TEN1Q86WV5 123 aa12□□□□□ -0.49
FAM228B-208ENST00000613899 PRO1854Q9UHT4 67 aa12□□□□□ -0.49
FAM228B-208ENST00000613899 LCE2BO14633 110 aa11.99□□□□□ -0.49
FAM228B-208ENST00000613899 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
FAM228B-208ENST00000613899 ATP11AUNQ6ZP68 121 aa11.97□□□□□ -0.49
FAM228B-208ENST00000613899 FXYD2P54710 66 aa11.95□□□□□ -0.5
FAM228B-208ENST00000613899 H3BMG7 143 aa11.94□□□□□ -0.5
FAM228B-208ENST00000613899 A0A087WSZ3 146 aa11.93□□□□□ -0.5
FAM228B-208ENST00000613899 FABP2P12104 132 aa11.93□□□□□ -0.5
FAM228B-208ENST00000613899 TRIAP1O43715 76 aa11.92□□□□□ -0.5
FAM228B-208ENST00000613899 Q96NJ1 140 aa11.91□□□□□ -0.5
FAM228B-208ENST00000613899 M0R2T5 61 aa11.9□□□□□ -0.5
FAM228B-208ENST00000613899 LORP23490 312 aaPredicted RBP11.88□□□□□ -0.51
FAM228B-208ENST00000613899 KRTAP10-6P60371 365 aaPredicted RBP11.88□□□□□ -0.51
FAM228B-208ENST00000613899 DNAL4O96015 105 aa11.87□□□□□ -0.51
FAM228B-208ENST00000613899 HSD52Q0P140 79 aa11.86□□□□□ -0.51
FAM228B-208ENST00000613899 H3BQ85 93 aa11.84□□□□□ -0.51
FAM228B-208ENST00000613899 C20orf166-AS1Q96NR2 134 aa11.84□□□□□ -0.51
FAM228B-208ENST00000613899 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
FAM228B-208ENST00000613899 FLGP20930 4061 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-208ENST00000613899 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
FAM228B-208ENST00000613899 A0A1W2PNM2 257 aa11.82□□□□□ -0.52
FAM228B-208ENST00000613899 PSMB2P49721 201 aa11.82□□□□□ -0.52
FAM228B-208ENST00000613899 A8MUU9 505 aa11.81□□□□□ -0.52
FAM228B-208ENST00000613899 COX6CP09669 75 aa11.8□□□□□ -0.52
FAM228B-208ENST00000613899 K7ERJ3 54 aa11.79□□□□□ -0.52
FAM228B-208ENST00000613899 ANKRD29Q8N6D5 301 aa11.79□□□□□ -0.52
FAM228B-208ENST00000613899 SIGMAR1Q99720 223 aa11.79□□□□□ -0.52
FAM228B-208ENST00000613899 CRCT1Q9UGL9 99 aa11.78□□□□□ -0.52
FAM228B-208ENST00000613899 TRBV7-4A0A0J9YYF1 115 aa11.77□□□□□ -0.53
FAM228B-208ENST00000613899 TMEM256-PLSCR3K7ERE1 68 aa11.77□□□□□ -0.53
FAM228B-208ENST00000613899 DSCR10P59022 87 aa11.75□□□□□ -0.53
FAM228B-208ENST00000613899 FSIP2Q5CZC0 6907 aa11.75□□□□□ -0.53
FAM228B-208ENST00000613899 A0A1B0GV72 72 aa11.74□□□□□ -0.53
FAM228B-208ENST00000613899 UQCR10Q9UDW1 63 aa11.73□□□□□ -0.53
FAM228B-208ENST00000613899 IGKV4-1P06312 121 aa11.71□□□□□ -0.53
FAM228B-208ENST00000613899 LINC00313P59037 77 aa11.69□□□□□ -0.54
FAM228B-208ENST00000613899 TRACP01848 142 aa11.68□□□□□ -0.54
FAM228B-208ENST00000613899 CCKP06307 115 aa11.68□□□□□ -0.54
FAM228B-208ENST00000613899 UBE2V1Q13404 147 aa11.68□□□□□ -0.54
FAM228B-208ENST00000613899 TRBV20-1A0A075B6N2 111 aa11.67□□□□□ -0.54
FAM228B-208ENST00000613899 TMA7Q9Y2S6 64 aaKnown RBP11.64□□□□□ -0.55
FAM228B-208ENST00000613899 LINC00472Q9H8W2 130 aa11.63□□□□□ -0.55
FAM228B-208ENST00000613899 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
FAM228B-208ENST00000613899 SCGB1C2P0DMR2 95 aa11.62□□□□□ -0.55
FAM228B-208ENST00000613899 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
FAM228B-208ENST00000613899 DEFB116Q30KQ4 102 aa11.6□□□□□ -0.55
FAM228B-208ENST00000613899 RBM3P98179 157 aaKnown RBP11.58□□□□□ -0.56
FAM228B-208ENST00000613899 VPS25Q9BRG1 176 aa11.58□□□□□ -0.56
FAM228B-208ENST00000613899 DSCR8Q96T75 97 aa11.57□□□□□ -0.56
FAM228B-208ENST00000613899 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
FAM228B-208ENST00000613899 NOTCH2NLQ7Z3S9 236 aa11.56□□□□□ -0.56
FAM228B-208ENST00000613899 C21orf62-AS1Q17RA5 79 aa11.52□□□□□ -0.57
FAM228B-208ENST00000613899 C8orf87E5RJ46 101 aa11.51□□□□□ -0.57
FAM228B-208ENST00000613899 A0A1B0GVX0 72 aa11.5□□□□□ -0.57
FAM228B-208ENST00000613899 BAALC-AS2P0C853 105 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms