RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 IGFL1Q6UW32 110 aa8.9□□□□□ -0.99
COL6A1-207ENST00000612273 K7EIL1 84 aa8.89□□□□□ -0.99
COL6A1-207ENST00000612273 BRK1Q8WUW1 75 aa8.89□□□□□ -0.99
COL6A1-207ENST00000612273 KRTAP11-1Q8IUC1 163 aa8.87□□□□□ -0.99
COL6A1-207ENST00000612273 UBE2AP49459 152 aa8.87□□□□□ -0.99
COL6A1-207ENST00000612273 F8WDY8 70 aa8.86□□□□□ -0.99
COL6A1-207ENST00000612273 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
COL6A1-207ENST00000612273 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
COL6A1-207ENST00000612273 HCG22E2RYF7 251 aa8.83□□□□□ -1
COL6A1-207ENST00000612273 SPRR4Q96PI1 79 aa8.83□□□□□ -1
COL6A1-207ENST00000612273 IGLV5-37A0A075B6J1 123 aa8.83□□□□□ -1
COL6A1-207ENST00000612273 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
COL6A1-207ENST00000612273 CMYA5Q8N3K9 4069 aa8.82□□□□□ -1
COL6A1-207ENST00000612273 LINC00208Q96KT6 92 aa8.8□□□□□ -1
COL6A1-207ENST00000612273 C16orf90A8MZG2 172 aa8.79□□□□□ -1
COL6A1-207ENST00000612273 H0Y9J4 135 aa8.78□□□□□ -1
COL6A1-207ENST00000612273 C1orf64Q8NEQ6 169 aa8.78□□□□□ -1
COL6A1-207ENST00000612273 PSPHP1O15172 72 aa8.78□□□□□ -1
COL6A1-207ENST00000612273 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
COL6A1-207ENST00000612273 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1.01
COL6A1-207ENST00000612273 PANO1I0J062 215 aa8.77□□□□□ -1.01
COL6A1-207ENST00000612273 IGLV9-49A0A0B4J1Y8 123 aa8.76□□□□□ -1.01
COL6A1-207ENST00000612273 TGP01266 2768 aa8.74□□□□□ -1.01
COL6A1-207ENST00000612273 PRO0628Q9UI54 55 aa8.73□□□□□ -1.01
COL6A1-207ENST00000612273 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
COL6A1-207ENST00000612273 MP68P56378 58 aa8.72□□□□□ -1.01
COL6A1-207ENST00000612273 ANAPC11Q9NYG5 84 aa8.71□□□□□ -1.01
COL6A1-207ENST00000612273 A0A1B0GW54 56 aa8.71□□□□□ -1.02
COL6A1-207ENST00000612273 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
COL6A1-207ENST00000612273 DNAH1Q9P2D7 4330 aa8.69□□□□□ -1.02
COL6A1-207ENST00000612273 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
COL6A1-207ENST00000612273 H0Y9P7 68 aa8.68□□□□□ -1.02
COL6A1-207ENST00000612273 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
COL6A1-207ENST00000612273 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
COL6A1-207ENST00000612273 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
COL6A1-207ENST00000612273 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
COL6A1-207ENST00000612273 APLNQ9ULZ1 77 aa8.65□□□□□ -1.02
COL6A1-207ENST00000612273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.03
COL6A1-207ENST00000612273 NDUFS5O43920 106 aa8.64□□□□□ -1.03
COL6A1-207ENST00000612273 PRR15Q8IV56 129 aa8.64□□□□□ -1.03
COL6A1-207ENST00000612273 MDFIQ99750 246 aa8.64□□□□□ -1.03
COL6A1-207ENST00000612273 LCE6AA0A183 80 aa8.63□□□□□ -1.03
COL6A1-207ENST00000612273 C9orf163Q8N9P6 203 aa8.63□□□□□ -1.03
COL6A1-207ENST00000612273 DNAH3Q8TD57 4116 aa8.63□□□□□ -1.03
COL6A1-207ENST00000612273 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
COL6A1-207ENST00000612273 A8MUN3 132 aa8.61□□□□□ -1.03
COL6A1-207ENST00000612273 A8MWP4 228 aa8.61□□□□□ -1.03
COL6A1-207ENST00000612273 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
COL6A1-207ENST00000612273 LINC00472Q9H8W2 130 aa8.6□□□□□ -1.03
COL6A1-207ENST00000612273 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
COL6A1-207ENST00000612273 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
COL6A1-207ENST00000612273 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
COL6A1-207ENST00000612273 IGLV8-61A0A075B6I0 122 aa8.59□□□□□ -1.03
COL6A1-207ENST00000612273 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
COL6A1-207ENST00000612273 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
COL6A1-207ENST00000612273 A8MU10 97 aa8.58□□□□□ -1.04
COL6A1-207ENST00000612273 NDUFB1O75438 58 aa8.57□□□□□ -1.04
COL6A1-207ENST00000612273 MOBPQ13875 183 aa8.56□□□□□ -1.04
COL6A1-207ENST00000612273 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
COL6A1-207ENST00000612273 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
COL6A1-207ENST00000612273 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
COL6A1-207ENST00000612273 SPRR1BP22528 89 aa8.51□□□□□ -1.05
COL6A1-207ENST00000612273 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
COL6A1-207ENST00000612273 A0A087X002 238 aa8.5□□□□□ -1.05
COL6A1-207ENST00000612273 NOTCH2NLQ7Z3S9 236 aa8.5□□□□□ -1.05
COL6A1-207ENST00000612273 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
COL6A1-207ENST00000612273 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
COL6A1-207ENST00000612273 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
COL6A1-207ENST00000612273 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
COL6A1-207ENST00000612273 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
COL6A1-207ENST00000612273 CHKB-CPT1BH3BT56 60 aa8.49□□□□□ -1.05
COL6A1-207ENST00000612273 Q1T7F1 81 aa8.49□□□□□ -1.05
COL6A1-207ENST00000612273 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
COL6A1-207ENST00000612273 RTL8CO15255 209 aa8.46□□□□□ -1.06
COL6A1-207ENST00000612273 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
COL6A1-207ENST00000612273 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.06
COL6A1-207ENST00000612273 A0A087WTM6 91 aa8.46□□□□□ -1.06
COL6A1-207ENST00000612273 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
COL6A1-207ENST00000612273 Q96NJ1 140 aa8.45□□□□□ -1.06
COL6A1-207ENST00000612273 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
COL6A1-207ENST00000612273 COA5Q86WW8 74 aa8.44□□□□□ -1.06
COL6A1-207ENST00000612273 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
COL6A1-207ENST00000612273 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
COL6A1-207ENST00000612273 SPTSSBQ8NFR3 76 aa8.44□□□□□ -1.06
COL6A1-207ENST00000612273 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
COL6A1-207ENST00000612273 CD164Q04900 197 aa8.43□□□□□ -1.06
COL6A1-207ENST00000612273 KMT2AQ03164 3969 aa8.43□□□□□ -1.06
COL6A1-207ENST00000612273 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
COL6A1-207ENST00000612273 Q5VV11 94 aa8.41□□□□□ -1.06
COL6A1-207ENST00000612273 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
COL6A1-207ENST00000612273 WWC2-AS2Q96NR7 200 aa8.41□□□□□ -1.06
COL6A1-207ENST00000612273 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
COL6A1-207ENST00000612273 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
COL6A1-207ENST00000612273 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
COL6A1-207ENST00000612273 A6NED7 52 aa8.37□□□□□ -1.07
COL6A1-207ENST00000612273 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
COL6A1-207ENST00000612273 H3BPC8 53 aa8.37□□□□□ -1.07
COL6A1-207ENST00000612273 LY6G6CO95867 125 aa8.36□□□□□ -1.07
COL6A1-207ENST00000612273 ZNF861PO60384 105 aa8.36□□□□□ -1.07
COL6A1-207ENST00000612273 PMAIP1Q13794 54 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms