RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 NDUFV3P56181 108 aaKnown RBP5.52□□□□□ -1.53
SMAD4-217ENST00000611848 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
SMAD4-217ENST00000611848 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
SMAD4-217ENST00000611848 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
SMAD4-217ENST00000611848 LOC110117498A0A087WWA1 95 aa5.51□□□□□ -1.53
SMAD4-217ENST00000611848 NKAPP1Q8N9T2 125 aa5.51□□□□□ -1.53
SMAD4-217ENST00000611848 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
SMAD4-217ENST00000611848 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-217ENST00000611848 RBM3P98179 157 aaKnown RBP5.5□□□□□ -1.53
SMAD4-217ENST00000611848 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
SMAD4-217ENST00000611848 Q6JHZ5 121 aa5.49□□□□□ -1.53
SMAD4-217ENST00000611848 Q6ZQT0 140 aa5.49□□□□□ -1.53
SMAD4-217ENST00000611848 KRTAP7-1Q8IUC3 87 aa5.49□□□□□ -1.53
SMAD4-217ENST00000611848 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
SMAD4-217ENST00000611848 FAM168BA1KXE4 195 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 LAMTOR3Q9UHA4 124 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 IGLV1-50A0A075B6I6 118 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 PRYO14603 147 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 PDE6GP18545 87 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 SPRR1AP35321 89 aa5.48□□□□□ -1.53
SMAD4-217ENST00000611848 FAM19A5Q7Z5A7 132 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-217ENST00000611848 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-217ENST00000611848 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-217ENST00000611848 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
SMAD4-217ENST00000611848 PCLOQ9Y6V0 5065 aa5.46□□□□□ -1.54
SMAD4-217ENST00000611848 DSCR8Q96T75 97 aa5.46□□□□□ -1.54
SMAD4-217ENST00000611848 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
SMAD4-217ENST00000611848 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 RPL37AP8A6NKH3 93 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 Q6ZRX8 168 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 DHRS4-AS1Q9P1J3 65 aa5.45□□□□□ -1.54
SMAD4-217ENST00000611848 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
SMAD4-217ENST00000611848 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
SMAD4-217ENST00000611848 HIST1H4AP62805 103 aaKnown RBP5.44□□□□□ -1.54
SMAD4-217ENST00000611848 UBE2BP63146 152 aa5.44□□□□□ -1.54
SMAD4-217ENST00000611848 ATP5EP2Q5VTU8 51 aa5.44□□□□□ -1.54
SMAD4-217ENST00000611848 PSORS1C2Q9UIG4 136 aa5.44□□□□□ -1.54
SMAD4-217ENST00000611848 IGKV3D-7A0A0C4DH55 119 aa5.43□□□□□ -1.54
SMAD4-217ENST00000611848 Q9BRP9 147 aa5.43□□□□□ -1.54
SMAD4-217ENST00000611848 UBL5Q9BZL1 73 aa5.43□□□□□ -1.54
SMAD4-217ENST00000611848 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-217ENST00000611848 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
SMAD4-217ENST00000611848 Q8N377 158 aa5.42□□□□□ -1.54
SMAD4-217ENST00000611848 MYCBP2O75592 4640 aa5.42□□□□□ -1.54
SMAD4-217ENST00000611848 ETDCA0A1B0GVM5 59 aa5.41□□□□□ -1.54
SMAD4-217ENST00000611848 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
SMAD4-217ENST00000611848 IGLV5-48A0A075B6I7 105 aa5.41□□□□□ -1.54
SMAD4-217ENST00000611848 REG3GQ6UW15 175 aa5.41□□□□□ -1.54
SMAD4-217ENST00000611848 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.54
SMAD4-217ENST00000611848 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.55
SMAD4-217ENST00000611848 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.55
SMAD4-217ENST00000611848 DMBT1Q9UGM3 2413 aaPredicted RBP5.4□□□□□ -1.55
SMAD4-217ENST00000611848 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
SMAD4-217ENST00000611848 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
SMAD4-217ENST00000611848 Q6ZVQ6 151 aa5.39□□□□□ -1.55
SMAD4-217ENST00000611848 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-217ENST00000611848 OXTP01178 125 aa5.38□□□□□ -1.55
SMAD4-217ENST00000611848 A0A087WVE0 104 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 ATOX1O00244 68 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 DEFB105AQ8NG35 78 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 ERC2-IT1O76042 136 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 CXCL6P80162 114 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 ST20-AS1Q8NBB2 130 aa5.37□□□□□ -1.55
SMAD4-217ENST00000611848 A0A1B0GW54 56 aa5.36□□□□□ -1.55
SMAD4-217ENST00000611848 BCE1O60756 84 aa5.36□□□□□ -1.55
SMAD4-217ENST00000611848 ZNF861PO60384 105 aa5.35□□□□□ -1.55
SMAD4-217ENST00000611848 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
SMAD4-217ENST00000611848 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
SMAD4-217ENST00000611848 H0Y9J4 135 aa5.34□□□□□ -1.56
SMAD4-217ENST00000611848 UQCRQO14949 82 aa5.34□□□□□ -1.56
SMAD4-217ENST00000611848 COX7CP15954 63 aa5.34□□□□□ -1.56
SMAD4-217ENST00000611848 SMIM29Q86T20 159 aa5.34□□□□□ -1.56
SMAD4-217ENST00000611848 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SMAD4-217ENST00000611848 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
SMAD4-217ENST00000611848 UBE2AP49459 152 aa5.32□□□□□ -1.56
SMAD4-217ENST00000611848 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
SMAD4-217ENST00000611848 TNXBP22105 4242 aa5.31□□□□□ -1.56
SMAD4-217ENST00000611848 PRLHP81277 87 aa5.31□□□□□ -1.56
SMAD4-217ENST00000611848 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
SMAD4-217ENST00000611848 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
SMAD4-217ENST00000611848 IGLV8-61A0A075B6I0 122 aa5.3□□□□□ -1.56
SMAD4-217ENST00000611848 NREPQ16612 68 aa5.3□□□□□ -1.56
SMAD4-217ENST00000611848 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
SMAD4-217ENST00000611848 Q8NBF4 154 aa5.3□□□□□ -1.56
SMAD4-217ENST00000611848 CRYGAP11844 174 aa5.3□□□□□ -1.56
SMAD4-217ENST00000611848 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
SMAD4-217ENST00000611848 SPRR1BP22528 89 aa5.29□□□□□ -1.56
SMAD4-217ENST00000611848 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
SMAD4-217ENST00000611848 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
SMAD4-217ENST00000611848 F8WEM9 126 aa5.27□□□□□ -1.57
SMAD4-217ENST00000611848 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
SMAD4-217ENST00000611848 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
SMAD4-217ENST00000611848 HERC1Q15751 4861 aa5.27□□□□□ -1.57
SMAD4-217ENST00000611848 IGKV4-1P06312 121 aa5.26□□□□□ -1.57
SMAD4-217ENST00000611848 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
SMAD4-217ENST00000611848 BPY2O14599 106 aa5.26□□□□□ -1.57
SMAD4-217ENST00000611848 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms