RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 MEIG1Q5JSS6 88 aa3.67□□□□□ -1.82
LINC01396-201ENST00000609099 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
LINC01396-201ENST00000609099 IMUPQ9GZP8 106 aa3.67□□□□□ -1.82
LINC01396-201ENST00000609099 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
LINC01396-201ENST00000609099 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
LINC01396-201ENST00000609099 NDUFA5Q16718 116 aa3.66□□□□□ -1.82
LINC01396-201ENST00000609099 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
LINC01396-201ENST00000609099 S100PP25815 95 aa3.65□□□□□ -1.83
LINC01396-201ENST00000609099 URB1-AS1Q96HZ7 61 aa3.65□□□□□ -1.83
LINC01396-201ENST00000609099 MAP1LC3CQ9BXW4 147 aa3.65□□□□□ -1.83
LINC01396-201ENST00000609099 LINC01546A6NGU7 62 aa3.64□□□□□ -1.83
LINC01396-201ENST00000609099 C11orf86A6NJI1 115 aa3.64□□□□□ -1.83
LINC01396-201ENST00000609099 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
LINC01396-201ENST00000609099 A0A096LNJ9 63 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 COLCA2A8K830 154 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 COX19Q49B96 90 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 SMCO4Q9NRQ5 59 aa3.63□□□□□ -1.83
LINC01396-201ENST00000609099 FABP9Q0Z7S8 132 aa3.62□□□□□ -1.83
LINC01396-201ENST00000609099 C18orf32Q8TCD1 76 aa3.62□□□□□ -1.83
LINC01396-201ENST00000609099 TRAPPC1Q9Y5R8 145 aa3.62□□□□□ -1.83
LINC01396-201ENST00000609099 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
LINC01396-201ENST00000609099 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
LINC01396-201ENST00000609099 LST1O00453 97 aa3.6□□□□□ -1.83
LINC01396-201ENST00000609099 HERV-K104P63124 156 aa3.6□□□□□ -1.83
LINC01396-201ENST00000609099 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
LINC01396-201ENST00000609099 FAM218AQ96MZ4 157 aa3.6□□□□□ -1.83
LINC01396-201ENST00000609099 MIEN1Q9BRT3 115 aa3.6□□□□□ -1.83
LINC01396-201ENST00000609099 TRGC2P03986 189 aa3.59□□□□□ -1.83
LINC01396-201ENST00000609099 TSPEAR-AS2P59090 65 aa3.58□□□□□ -1.84
LINC01396-201ENST00000609099 PMCHL1Q16048 86 aa3.58□□□□□ -1.84
LINC01396-201ENST00000609099 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
LINC01396-201ENST00000609099 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
LINC01396-201ENST00000609099 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
LINC01396-201ENST00000609099 F8WEM9 126 aa3.57□□□□□ -1.84
LINC01396-201ENST00000609099 NDUFC2O95298 119 aa3.57□□□□□ -1.84
LINC01396-201ENST00000609099 LINC00614P0C842 121 aa3.57□□□□□ -1.84
LINC01396-201ENST00000609099 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 COX7BP24311 80 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
LINC01396-201ENST00000609099 IGLV5-48A0A075B6I7 105 aa3.55□□□□□ -1.84
LINC01396-201ENST00000609099 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
LINC01396-201ENST00000609099 SERF1AO75920 110 aa3.55□□□□□ -1.84
LINC01396-201ENST00000609099 HBDP02042 147 aa3.55□□□□□ -1.84
LINC01396-201ENST00000609099 S100A1P23297 94 aa3.55□□□□□ -1.84
LINC01396-201ENST00000609099 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
LINC01396-201ENST00000609099 MYMXA0A1B0GTQ4 84 aa3.54□□□□□ -1.84
LINC01396-201ENST00000609099 FAM236AA0A1B0GUQ0 79 aa3.54□□□□□ -1.84
LINC01396-201ENST00000609099 FAM236BA0A1B0GV22 79 aa3.54□□□□□ -1.84
LINC01396-201ENST00000609099 DSCR10P59022 87 aa3.54□□□□□ -1.84
LINC01396-201ENST00000609099 ELOF1P60002 83 aaKnown RBP3.53□□□□□ -1.84
LINC01396-201ENST00000609099 COA6Q5JTJ3 125 aaKnown RBP3.53□□□□□ -1.84
LINC01396-201ENST00000609099 Q6JHZ5 121 aa3.53□□□□□ -1.84
LINC01396-201ENST00000609099 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
LINC01396-201ENST00000609099 A0A1B0GWB2 263 aa3.52□□□□□ -1.85
LINC01396-201ENST00000609099 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
LINC01396-201ENST00000609099 BAGE3Q86Y29 109 aa3.52□□□□□ -1.85
LINC01396-201ENST00000609099 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
LINC01396-201ENST00000609099 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 HSBP1O75506 76 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 SPINK7P58062 85 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 LINC00313P59037 77 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 IFI27L1Q96BM0 104 aa3.51□□□□□ -1.85
LINC01396-201ENST00000609099 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
LINC01396-201ENST00000609099 CLEC2BQ92478 149 aa3.5□□□□□ -1.85
LINC01396-201ENST00000609099 SS18L2Q9UHA2 77 aa3.5□□□□□ -1.85
LINC01396-201ENST00000609099 LEPROTL1O95214 131 aa3.49□□□□□ -1.85
LINC01396-201ENST00000609099 FABP4P15090 132 aa3.49□□□□□ -1.85
LINC01396-201ENST00000609099 NMUP48645 174 aa3.49□□□□□ -1.85
LINC01396-201ENST00000609099 NPC2P61916 151 aa3.49□□□□□ -1.85
LINC01396-201ENST00000609099 WFDC13Q8IUB5 93 aa3.48□□□□□ -1.85
LINC01396-201ENST00000609099 H0Y8G0 127 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 HIST3H2BBQ8N257 126 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 PMCHL2Q9BQD1 86 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 HSPB8Q9UJY1 196 aa3.47□□□□□ -1.85
LINC01396-201ENST00000609099 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
LINC01396-201ENST00000609099 C3orf79P0CE67 100 aa3.46□□□□□ -1.86
LINC01396-201ENST00000609099 LINC01545Q5VT33 79 aa3.46□□□□□ -1.86
LINC01396-201ENST00000609099 HIST1H2BLQ99880 126 aa3.46□□□□□ -1.86
LINC01396-201ENST00000609099 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
LINC01396-201ENST00000609099 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
LINC01396-201ENST00000609099 PLNP26678 52 aa3.45□□□□□ -1.86
LINC01396-201ENST00000609099 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
LINC01396-201ENST00000609099 A0A0J9YXY3 114 aa3.44□□□□□ -1.86
LINC01396-201ENST00000609099 DPM2O94777 84 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms