RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 C20orf202A1L168 122 aa7.06□□□□□ -1.28
POLR2J3-219ENST00000608621 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
POLR2J3-219ENST00000608621 F8WEM9 126 aa7.05□□□□□ -1.28
POLR2J3-219ENST00000608621 VAMP3Q15836 100 aa7.04□□□□□ -1.28
POLR2J3-219ENST00000608621 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
POLR2J3-219ENST00000608621 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
POLR2J3-219ENST00000608621 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
POLR2J3-219ENST00000608621 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
POLR2J3-219ENST00000608621 Q6JHZ5 121 aa7.01□□□□□ -1.29
POLR2J3-219ENST00000608621 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
POLR2J3-219ENST00000608621 IGFL1Q6UW32 110 aa7□□□□□ -1.29
POLR2J3-219ENST00000608621 Q6ZQY7 126 aa7□□□□□ -1.29
POLR2J3-219ENST00000608621 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
POLR2J3-219ENST00000608621 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
POLR2J3-219ENST00000608621 Q6Q795 121 aa6.98□□□□□ -1.29
POLR2J3-219ENST00000608621 ATP11AUNQ6ZP68 121 aa6.98□□□□□ -1.29
POLR2J3-219ENST00000608621 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
POLR2J3-219ENST00000608621 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
POLR2J3-219ENST00000608621 Q75L30 129 aa6.96□□□□□ -1.3
POLR2J3-219ENST00000608621 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
POLR2J3-219ENST00000608621 LST1O00453 97 aa6.93□□□□□ -1.3
POLR2J3-219ENST00000608621 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
POLR2J3-219ENST00000608621 Q96NJ1 140 aa6.92□□□□□ -1.3
POLR2J3-219ENST00000608621 H3BUT2 72 aa6.91□□□□□ -1.3
POLR2J3-219ENST00000608621 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
POLR2J3-219ENST00000608621 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
POLR2J3-219ENST00000608621 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
POLR2J3-219ENST00000608621 C12orf57Q99622 126 aa6.9□□□□□ -1.3
POLR2J3-219ENST00000608621 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
POLR2J3-219ENST00000608621 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
POLR2J3-219ENST00000608621 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
POLR2J3-219ENST00000608621 S100A2P29034 98 aa6.87□□□□□ -1.31
POLR2J3-219ENST00000608621 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
POLR2J3-219ENST00000608621 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
POLR2J3-219ENST00000608621 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
POLR2J3-219ENST00000608621 A8MUU9 505 aa6.84□□□□□ -1.31
POLR2J3-219ENST00000608621 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
POLR2J3-219ENST00000608621 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
POLR2J3-219ENST00000608621 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
POLR2J3-219ENST00000608621 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-219ENST00000608621 A0A087WSZ3 146 aa6.81□□□□□ -1.32
POLR2J3-219ENST00000608621 SNCGO76070 127 aa6.81□□□□□ -1.32
POLR2J3-219ENST00000608621 CFC1P0CG37 223 aa6.81□□□□□ -1.32
POLR2J3-219ENST00000608621 H0YGX0 51 aa6.8□□□□□ -1.32
POLR2J3-219ENST00000608621 COX8AP10176 69 aa6.8□□□□□ -1.32
POLR2J3-219ENST00000608621 DSCR10P59022 87 aa6.79□□□□□ -1.32
POLR2J3-219ENST00000608621 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
POLR2J3-219ENST00000608621 FAM218AQ96MZ4 157 aa6.79□□□□□ -1.32
POLR2J3-219ENST00000608621 H3BMG7 143 aa6.78□□□□□ -1.32
POLR2J3-219ENST00000608621 DLEU1O43261 78 aa6.77□□□□□ -1.33
POLR2J3-219ENST00000608621 S100A6P06703 90 aa6.77□□□□□ -1.33
POLR2J3-219ENST00000608621 S100A1P23297 94 aa6.77□□□□□ -1.33
POLR2J3-219ENST00000608621 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
POLR2J3-219ENST00000608621 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
POLR2J3-219ENST00000608621 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
POLR2J3-219ENST00000608621 FABP2P12104 132 aa6.75□□□□□ -1.33
POLR2J3-219ENST00000608621 C14orf144Q96I85 54 aa6.75□□□□□ -1.33
POLR2J3-219ENST00000608621 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
POLR2J3-219ENST00000608621 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
POLR2J3-219ENST00000608621 LINC00313P59037 77 aa6.74□□□□□ -1.33
POLR2J3-219ENST00000608621 USH2AO75445 5202 aa6.73□□□□□ -1.33
POLR2J3-219ENST00000608621 GHRHP01286 108 aa6.73□□□□□ -1.33
POLR2J3-219ENST00000608621 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
POLR2J3-219ENST00000608621 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
POLR2J3-219ENST00000608621 A0A1B0GX51 115 aa6.72□□□□□ -1.33
POLR2J3-219ENST00000608621 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
POLR2J3-219ENST00000608621 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
POLR2J3-219ENST00000608621 SSPOA2VEC9 5147 aa6.71□□□□□ -1.33
POLR2J3-219ENST00000608621 MT2AP02795 61 aa6.71□□□□□ -1.34
POLR2J3-219ENST00000608621 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
POLR2J3-219ENST00000608621 C2orf91Q6ZV80 131 aa6.69□□□□□ -1.34
POLR2J3-219ENST00000608621 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
POLR2J3-219ENST00000608621 SPATA45Q537H7 98 aa6.68□□□□□ -1.34
POLR2J3-219ENST00000608621 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
POLR2J3-219ENST00000608621 CEND1Q8N111 149 aa6.68□□□□□ -1.34
POLR2J3-219ENST00000608621 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
POLR2J3-219ENST00000608621 PAM16Q9Y3D7 125 aa6.68□□□□□ -1.34
POLR2J3-219ENST00000608621 HRES1P13985 223 aa6.67□□□□□ -1.34
POLR2J3-219ENST00000608621 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
POLR2J3-219ENST00000608621 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
POLR2J3-219ENST00000608621 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
POLR2J3-219ENST00000608621 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
POLR2J3-219ENST00000608621 A0A1B0GV72 72 aa6.65□□□□□ -1.34
POLR2J3-219ENST00000608621 TRIAP1O43715 76 aa6.65□□□□□ -1.34
POLR2J3-219ENST00000608621 MT1FP04733 61 aa6.65□□□□□ -1.34
POLR2J3-219ENST00000608621 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
POLR2J3-219ENST00000608621 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
POLR2J3-219ENST00000608621 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
POLR2J3-219ENST00000608621 A6NJY4 79 aa6.63□□□□□ -1.35
POLR2J3-219ENST00000608621 FXYD2P54710 66 aa6.63□□□□□ -1.35
POLR2J3-219ENST00000608621 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
POLR2J3-219ENST00000608621 ORMDL1Q9P0S3 153 aa6.63□□□□□ -1.35
POLR2J3-219ENST00000608621 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
POLR2J3-219ENST00000608621 DNAL4O96015 105 aa6.62□□□□□ -1.35
POLR2J3-219ENST00000608621 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
POLR2J3-219ENST00000608621 VAMP8Q9BV40 100 aa6.62□□□□□ -1.35
POLR2J3-219ENST00000608621 H3BQ85 93 aa6.61□□□□□ -1.35
POLR2J3-219ENST00000608621 TMEM256-PLSCR3K7ERE1 68 aa6.6□□□□□ -1.35
POLR2J3-219ENST00000608621 TRACP01848 142 aa6.6□□□□□ -1.35
POLR2J3-219ENST00000608621 CCKP06307 115 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms