RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 Q8NAQ8 132 aa8.08□□□□□ -1.12
CTCFL-218ENST00000608440 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
CTCFL-218ENST00000608440 CAMK2N2Q96S95 79 aa8.07□□□□□ -1.12
CTCFL-218ENST00000608440 PRO0255Q9UI72 69 aa8.07□□□□□ -1.12
CTCFL-218ENST00000608440 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
CTCFL-218ENST00000608440 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-218ENST00000608440 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
CTCFL-218ENST00000608440 SPRR4Q96PI1 79 aa8.06□□□□□ -1.12
CTCFL-218ENST00000608440 A0A1B0GW54 56 aa8.06□□□□□ -1.12
CTCFL-218ENST00000608440 TNP2Q05952 138 aa8.03□□□□□ -1.12
CTCFL-218ENST00000608440 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
CTCFL-218ENST00000608440 RPL37AP8A6NKH3 93 aa8.02□□□□□ -1.13
CTCFL-218ENST00000608440 TRRAPQ9Y4A5 3859 aa8.02□□□□□ -1.13
CTCFL-218ENST00000608440 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
CTCFL-218ENST00000608440 DEFB4AO15263 64 aa8.01□□□□□ -1.13
CTCFL-218ENST00000608440 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
CTCFL-218ENST00000608440 H3BPC8 53 aa8□□□□□ -1.13
CTCFL-218ENST00000608440 KRTAP24-1Q3LI83 254 aa8□□□□□ -1.13
CTCFL-218ENST00000608440 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
CTCFL-218ENST00000608440 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
CTCFL-218ENST00000608440 A0A087WSZ3 146 aa7.99□□□□□ -1.13
CTCFL-218ENST00000608440 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
CTCFL-218ENST00000608440 STAB1Q9NY15 2570 aa7.98□□□□□ -1.13
CTCFL-218ENST00000608440 LINC00476Q8WZB0 136 aa7.97□□□□□ -1.13
CTCFL-218ENST00000608440 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.13
CTCFL-218ENST00000608440 EGFEM1PQ0D2K5 195 aa7.96□□□□□ -1.13
CTCFL-218ENST00000608440 Q6ZRX8 168 aa7.96□□□□□ -1.13
CTCFL-218ENST00000608440 DHRS4-AS1Q9P1J3 65 aa7.96□□□□□ -1.13
CTCFL-218ENST00000608440 HTN3P15516 51 aa7.95□□□□□ -1.14
CTCFL-218ENST00000608440 CMC4P56277 68 aaPredicted RBP7.95□□□□□ -1.14
CTCFL-218ENST00000608440 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
CTCFL-218ENST00000608440 CNBPP62633 177 aaKnown RBP7.94□□□□□ -1.14
CTCFL-218ENST00000608440 PRR34Q9NV39 138 aa7.94□□□□□ -1.14
CTCFL-218ENST00000608440 COL6A5A8TX70 2615 aa7.93□□□□□ -1.14
CTCFL-218ENST00000608440 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
CTCFL-218ENST00000608440 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
CTCFL-218ENST00000608440 HRES1P13985 223 aa7.91□□□□□ -1.14
CTCFL-218ENST00000608440 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
CTCFL-218ENST00000608440 FAM168BA1KXE4 195 aa7.89□□□□□ -1.15
CTCFL-218ENST00000608440 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
CTCFL-218ENST00000608440 LELP1Q5T871 98 aa7.88□□□□□ -1.15
CTCFL-218ENST00000608440 X6R8D5 127 aa7.88□□□□□ -1.15
CTCFL-218ENST00000608440 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
CTCFL-218ENST00000608440 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
CTCFL-218ENST00000608440 PKD1L1Q8TDX9 2849 aa7.86□□□□□ -1.15
CTCFL-218ENST00000608440 H0Y9J4 135 aa7.86□□□□□ -1.15
CTCFL-218ENST00000608440 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
CTCFL-218ENST00000608440 RTL8CO15255 209 aa7.85□□□□□ -1.15
CTCFL-218ENST00000608440 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
CTCFL-218ENST00000608440 Q6ZR54 194 aa7.83□□□□□ -1.16
CTCFL-218ENST00000608440 A8MWP4 228 aa7.82□□□□□ -1.16
CTCFL-218ENST00000608440 CSMD3Q7Z407 3707 aa7.82□□□□□ -1.16
CTCFL-218ENST00000608440 NOTCH1P46531 2555 aa7.81□□□□□ -1.16
CTCFL-218ENST00000608440 DEFB135Q30KP9 77 aa7.8□□□□□ -1.16
CTCFL-218ENST00000608440 KRTAP10-11P60412 298 aa7.8□□□□□ -1.16
CTCFL-218ENST00000608440 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
CTCFL-218ENST00000608440 SPRR1AP35321 89 aa7.79□□□□□ -1.16
CTCFL-218ENST00000608440 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
CTCFL-218ENST00000608440 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
CTCFL-218ENST00000608440 MGAM2Q2M2H8 2515 aa7.76□□□□□ -1.17
CTCFL-218ENST00000608440 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
CTCFL-218ENST00000608440 A0A096LNI7 61 aa7.76□□□□□ -1.17
CTCFL-218ENST00000608440 C1orf134Q5TEV5 83 aa7.76□□□□□ -1.17
CTCFL-218ENST00000608440 PRLHP81277 87 aa7.75□□□□□ -1.17
CTCFL-218ENST00000608440 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
CTCFL-218ENST00000608440 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
CTCFL-218ENST00000608440 ASB16-AS1Q495Z4 193 aa7.74□□□□□ -1.17
CTCFL-218ENST00000608440 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
CTCFL-218ENST00000608440 ANK2Q01484 3957 aa7.74□□□□□ -1.17
CTCFL-218ENST00000608440 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
CTCFL-218ENST00000608440 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
CTCFL-218ENST00000608440 A0A1B0GU69 56 aa7.71□□□□□ -1.18
CTCFL-218ENST00000608440 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
CTCFL-218ENST00000608440 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
CTCFL-218ENST00000608440 TENM2Q9NT68 2774 aa7.69□□□□□ -1.18
CTCFL-218ENST00000608440 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
CTCFL-218ENST00000608440 DEFB131BA0A096LNP1 70 aa7.68□□□□□ -1.18
CTCFL-218ENST00000608440 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
CTCFL-218ENST00000608440 K7EIL1 84 aa7.67□□□□□ -1.18
CTCFL-218ENST00000608440 TENM3Q9P273 2699 aa7.67□□□□□ -1.18
CTCFL-218ENST00000608440 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
CTCFL-218ENST00000608440 SPART-AS1P0CW21 52 aa7.65□□□□□ -1.18
CTCFL-218ENST00000608440 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
CTCFL-218ENST00000608440 A0A087X002 238 aa7.62□□□□□ -1.19
CTCFL-218ENST00000608440 IGHV6-1A0A0B4J1U7 121 aa7.62□□□□□ -1.19
CTCFL-218ENST00000608440 UQCR11O14957 56 aa7.62□□□□□ -1.19
CTCFL-218ENST00000608440 ACYP2P14621 99 aa7.62□□□□□ -1.19
CTCFL-218ENST00000608440 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
CTCFL-218ENST00000608440 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
CTCFL-218ENST00000608440 ROMO1P60602 79 aa7.61□□□□□ -1.19
CTCFL-218ENST00000608440 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
CTCFL-218ENST00000608440 ZNF861PO60384 105 aa7.58□□□□□ -1.2
CTCFL-218ENST00000608440 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
CTCFL-218ENST00000608440 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
CTCFL-218ENST00000608440 DNHD1Q96M86 4753 aa7.54□□□□□ -1.2
CTCFL-218ENST00000608440 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
CTCFL-218ENST00000608440 Q5W150 140 aa7.54□□□□□ -1.2
CTCFL-218ENST00000608440 Q96NJ1 140 aa7.53□□□□□ -1.2
CTCFL-218ENST00000608440 STAB2Q8WWQ8 2551 aa7.52□□□□□ -1.21
CTCFL-218ENST00000608440 A0A1B0GVX0 72 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms