RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 PDE4DIPQ5VU43 2346 aa1.58□□□□□ -2.16
LINC00343-211ENST00000608426 M0QY20 66 aa1.58□□□□□ -2.16
LINC00343-211ENST00000608426 Q5VSD8 79 aa1.58□□□□□ -2.16
LINC00343-211ENST00000608426 NAV3Q8IVL0 2385 aa1.58□□□□□ -2.16
LINC00343-211ENST00000608426 H3BUA1 57 aa1.57□□□□□ -2.16
LINC00343-211ENST00000608426 RP1L1Q8IWN7 2480 aaPredicted RBP1.57□□□□□ -2.16
LINC00343-211ENST00000608426 JMJD1CQ15652 2540 aa1.56□□□□□ -2.16
LINC00343-211ENST00000608426 SPRR1BP22528 89 aa1.55□□□□□ -2.16
LINC00343-211ENST00000608426 CNTRLQ7Z7A1 2325 aa1.55□□□□□ -2.16
LINC00343-211ENST00000608426 PRLHP81277 87 aa1.53□□□□□ -2.16
LINC00343-211ENST00000608426 DEFB109BQ30KR1 87 aa1.53□□□□□ -2.16
LINC00343-211ENST00000608426 TOMM7Q9P0U1 55 aa1.53□□□□□ -2.16
LINC00343-211ENST00000608426 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
LINC00343-211ENST00000608426 A8MTW9 85 aa1.51□□□□□ -2.17
LINC00343-211ENST00000608426 KLK9Q2XQG4 91 aa1.51□□□□□ -2.17
LINC00343-211ENST00000608426 CLPSL2Q6UWE3 100 aa1.51□□□□□ -2.17
LINC00343-211ENST00000608426 S4R3F8 94 aa1.51□□□□□ -2.17
LINC00343-211ENST00000608426 PTPRZ1P23471 2315 aaPredicted RBP1.51□□□□□ -2.17
LINC00343-211ENST00000608426 WNK2Q9Y3S1 2297 aa1.51□□□□□ -2.17
LINC00343-211ENST00000608426 REV3LO60673 3130 aa1.5□□□□□ -2.17
LINC00343-211ENST00000608426 TMEM167AQ8TBQ9 72 aa1.49□□□□□ -2.17
LINC00343-211ENST00000608426 DEFB104AQ8WTQ1 72 aa1.49□□□□□ -2.17
LINC00343-211ENST00000608426 PLCE1Q9P212 2302 aa1.48□□□□□ -2.17
LINC00343-211ENST00000608426 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
LINC00343-211ENST00000608426 USF3Q68DE3 2245 aa1.47□□□□□ -2.17
LINC00343-211ENST00000608426 K7EIM0 57 aa1.47□□□□□ -2.17
LINC00343-211ENST00000608426 DEFB106AQ8N104 65 aa1.47□□□□□ -2.17
LINC00343-211ENST00000608426 ASH1LQ9NR48 2969 aaKnown RBP1.47□□□□□ -2.17
LINC00343-211ENST00000608426 PCNX1Q96RV3 2341 aa1.47□□□□□ -2.17
LINC00343-211ENST00000608426 IGF2RP11717 2491 aa1.47□□□□□ -2.17
LINC00343-211ENST00000608426 A0A0D9SG42 100 aa1.46□□□□□ -2.18
LINC00343-211ENST00000608426 ROS1P08922 2347 aa1.46□□□□□ -2.18
LINC00343-211ENST00000608426 NOP10Q9NPE3 64 aaKnown RBP1.45□□□□□ -2.18
LINC00343-211ENST00000608426 ZNF462Q96JM2 2506 aa1.44□□□□□ -2.18
LINC00343-211ENST00000608426 PKDREJQ9NTG1 2253 aa1.44□□□□□ -2.18
LINC00343-211ENST00000608426 KRTAP10-4P60372 401 aaPredicted RBP1.44□□□□□ -2.18
LINC00343-211ENST00000608426 TPRP12270 2363 aaKnown RBP1.44□□□□□ -2.18
LINC00343-211ENST00000608426 SPINK1P00995 79 aa1.43□□□□□ -2.18
LINC00343-211ENST00000608426 RPL39P5Q59GN2 51 aa1.43□□□□□ -2.18
LINC00343-211ENST00000608426 DSPP15924 2871 aaKnown RBP1.42□□□□□ -2.18
LINC00343-211ENST00000608426 C2CD3Q4AC94 2353 aa1.39□□□□□ -2.19
LINC00343-211ENST00000608426 DEFB108AA8MXU0 73 aa1.39□□□□□ -2.19
LINC00343-211ENST00000608426 CHD7Q9P2D1 2997 aa1.38□□□□□ -2.19
LINC00343-211ENST00000608426 TRANK1O15050 2925 aa1.36□□□□□ -2.19
LINC00343-211ENST00000608426 CELSR2Q9HCU4 2923 aa1.35□□□□□ -2.19
LINC00343-211ENST00000608426 CSPG4Q6UVK1 2322 aa1.34□□□□□ -2.19
LINC00343-211ENST00000608426 MEGF8Q7Z7M0 2845 aa1.34□□□□□ -2.19
LINC00343-211ENST00000608426 CELSR1Q9NYQ6 3014 aa1.32□□□□□ -2.2
LINC00343-211ENST00000608426 SPTBN2O15020 2390 aa1.31□□□□□ -2.2
LINC00343-211ENST00000608426 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
LINC00343-211ENST00000608426 PRRC2CQ9Y520 2896 aaKnown RBP1.3□□□□□ -2.2
LINC00343-211ENST00000608426 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
LINC00343-211ENST00000608426 OTOGQ6ZRI0 2925 aa1.29□□□□□ -2.2
LINC00343-211ENST00000608426 ZNF292O60281 2723 aa1.29□□□□□ -2.2
LINC00343-211ENST00000608426 M0QZ58 72 aa1.28□□□□□ -2.2
LINC00343-211ENST00000608426 UNC79Q9P2D8 2635 aa1.28□□□□□ -2.2
LINC00343-211ENST00000608426 CHD9Q3L8U1 2897 aa1.27□□□□□ -2.21
LINC00343-211ENST00000608426 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
LINC00343-211ENST00000608426 MGAQ8IWI9 3026 aa1.27□□□□□ -2.21
LINC00343-211ENST00000608426 CACNA1HO95180 2353 aa1.27□□□□□ -2.21
LINC00343-211ENST00000608426 F8P00451 2351 aa1.26□□□□□ -2.21
LINC00343-211ENST00000608426 H0YGG7 62 aa1.26□□□□□ -2.21
LINC00343-211ENST00000608426 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
LINC00343-211ENST00000608426 TENM2Q9NT68 2774 aa1.26□□□□□ -2.21
LINC00343-211ENST00000608426 VPS13DQ5THJ4 4388 aa1.25□□□□□ -2.21
LINC00343-211ENST00000608426 AKAP6Q13023 2319 aa1.25□□□□□ -2.21
LINC00343-211ENST00000608426 APELAP0DMC3 54 aa1.25□□□□□ -2.21
LINC00343-211ENST00000608426 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
LINC00343-211ENST00000608426 VWFP04275 2813 aa1.25□□□□□ -2.21
LINC00343-211ENST00000608426 SRRM2Q9UQ35 2752 aaKnown RBP1.25□□□□□ -2.21
LINC00343-211ENST00000608426 CSMD3Q7Z407 3707 aa1.24□□□□□ -2.21
LINC00343-211ENST00000608426 DNAH11Q96DT5 4516 aa1.23□□□□□ -2.21
LINC00343-211ENST00000608426 GVINP1Q7Z2Y8 2422 aa1.23□□□□□ -2.21
LINC00343-211ENST00000608426 DEFB135Q30KP9 77 aa1.23□□□□□ -2.21
LINC00343-211ENST00000608426 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
LINC00343-211ENST00000608426 MYCBP2O75592 4640 aa1.22□□□□□ -2.21
LINC00343-211ENST00000608426 TTC28Q96AY4 2481 aa1.22□□□□□ -2.21
LINC00343-211ENST00000608426 NBPF19A0A087WUL8 3843 aa1.21□□□□□ -2.22
LINC00343-211ENST00000608426 H3BUX3 64 aa1.21□□□□□ -2.22
LINC00343-211ENST00000608426 EP300Q09472 2414 aaPredicted RBP1.21□□□□□ -2.22
LINC00343-211ENST00000608426 AKAP13Q12802 2813 aa1.21□□□□□ -2.22
LINC00343-211ENST00000608426 TNRC18O15417 2968 aaPredicted RBP1.2□□□□□ -2.22
LINC00343-211ENST00000608426 CEP290O15078 2479 aa1.19□□□□□ -2.22
LINC00343-211ENST00000608426 UBR5O95071 2799 aaPredicted RBP1.19□□□□□ -2.22
LINC00343-211ENST00000608426 STATHP02808 62 aa1.19□□□□□ -2.22
LINC00343-211ENST00000608426 DEFB1P60022 68 aa1.19□□□□□ -2.22
LINC00343-211ENST00000608426 PKD1L2Q7Z442 2459 aa1.18□□□□□ -2.22
LINC00343-211ENST00000608426 POLQO75417 2590 aa1.18□□□□□ -2.22
LINC00343-211ENST00000608426 BSNQ9UPA5 3926 aa1.18□□□□□ -2.22
LINC00343-211ENST00000608426 COL6A5A8TX70 2615 aa1.18□□□□□ -2.22
LINC00343-211ENST00000608426 ANK2Q01484 3957 aa1.18□□□□□ -2.22
LINC00343-211ENST00000608426 M0R2T5 61 aa1.17□□□□□ -2.22
LINC00343-211ENST00000608426 TENM4Q6N022 2769 aa1.17□□□□□ -2.22
LINC00343-211ENST00000608426 LYSTQ99698 3801 aa1.17□□□□□ -2.22
LINC00343-211ENST00000608426 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
LINC00343-211ENST00000608426 CRYBG3Q68DQ2 2970 aa1.16□□□□□ -2.22
LINC00343-211ENST00000608426 TNP1P09430 55 aa1.16□□□□□ -2.22
LINC00343-211ENST00000608426 RHPN1-AS1Q9BWJ2 59 aa1.16□□□□□ -2.22
LINC00343-211ENST00000608426 SPTA1P02549 2419 aa1.16□□□□□ -2.22
LINC00343-211ENST00000608426 ACACAQ13085 2346 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms