RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 A0A1B0GVY2 172 aa10.12□□□□□ -0.79
CTCFL-215ENST00000608158 F8WEM9 126 aa10.12□□□□□ -0.79
CTCFL-215ENST00000608158 C21orf62-AS1Q17RA5 79 aa10.12□□□□□ -0.79
CTCFL-215ENST00000608158 RYR3Q15413 4870 aa10.1□□□□□ -0.79
CTCFL-215ENST00000608158 ZNF861PO60384 105 aa10.1□□□□□ -0.79
CTCFL-215ENST00000608158 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
CTCFL-215ENST00000608158 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
CTCFL-215ENST00000608158 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
CTCFL-215ENST00000608158 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
CTCFL-215ENST00000608158 SPRR4Q96PI1 79 aa10.08□□□□□ -0.8
CTCFL-215ENST00000608158 IGLV8-61A0A075B6I0 122 aa10.06□□□□□ -0.8
CTCFL-215ENST00000608158 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-215ENST00000608158 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
CTCFL-215ENST00000608158 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
CTCFL-215ENST00000608158 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
CTCFL-215ENST00000608158 Q8NBF4 154 aa10.04□□□□□ -0.8
CTCFL-215ENST00000608158 A0A1W2PNM2 257 aa10.03□□□□□ -0.8
CTCFL-215ENST00000608158 Q6JHZ5 121 aa10.03□□□□□ -0.8
CTCFL-215ENST00000608158 SRRM2Q9UQ35 2752 aaKnown RBP10.02□□□□□ -0.8
CTCFL-215ENST00000608158 IGFL1Q6UW32 110 aa10.02□□□□□ -0.81
CTCFL-215ENST00000608158 TRBV7-7A0A0K0K1E9 115 aa10.01□□□□□ -0.81
CTCFL-215ENST00000608158 Q6ZVQ6 151 aa10.01□□□□□ -0.81
CTCFL-215ENST00000608158 A0A0G2JQZ4 141 aa9.99□□□□□ -0.81
CTCFL-215ENST00000608158 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
CTCFL-215ENST00000608158 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
CTCFL-215ENST00000608158 A0A1B0GW54 56 aa9.97□□□□□ -0.81
CTCFL-215ENST00000608158 Q6Q795 121 aa9.97□□□□□ -0.81
CTCFL-215ENST00000608158 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
CTCFL-215ENST00000608158 CRYGAP11844 174 aa9.95□□□□□ -0.82
CTCFL-215ENST00000608158 IMUPQ9GZP8 106 aa9.95□□□□□ -0.82
CTCFL-215ENST00000608158 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
CTCFL-215ENST00000608158 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
CTCFL-215ENST00000608158 C9orf153Q5TBE3 101 aa9.94□□□□□ -0.82
CTCFL-215ENST00000608158 ANAPC11Q9NYG5 84 aa9.94□□□□□ -0.82
CTCFL-215ENST00000608158 VPS13BQ7Z7G8 4022 aa9.91□□□□□ -0.82
CTCFL-215ENST00000608158 NREPQ16612 68 aa9.91□□□□□ -0.82
CTCFL-215ENST00000608158 MOBPQ13875 183 aa9.9□□□□□ -0.82
CTCFL-215ENST00000608158 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
CTCFL-215ENST00000608158 CXCL6P80162 114 aa9.88□□□□□ -0.83
CTCFL-215ENST00000608158 A0A087WSZ3 146 aa9.88□□□□□ -0.83
CTCFL-215ENST00000608158 PCP4P48539 62 aa9.86□□□□□ -0.83
CTCFL-215ENST00000608158 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
CTCFL-215ENST00000608158 HIST1H4AP62805 103 aaKnown RBP9.84□□□□□ -0.83
CTCFL-215ENST00000608158 A0A087WVE0 104 aa9.84□□□□□ -0.83
CTCFL-215ENST00000608158 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
CTCFL-215ENST00000608158 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
CTCFL-215ENST00000608158 BPY2O14599 106 aa9.83□□□□□ -0.84
CTCFL-215ENST00000608158 KRTAP1-4P0C5Y4 121 aa9.81□□□□□ -0.84
CTCFL-215ENST00000608158 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
CTCFL-215ENST00000608158 A0A087X002 238 aa9.8□□□□□ -0.84
CTCFL-215ENST00000608158 FAT1Q14517 4588 aa9.79□□□□□ -0.84
CTCFL-215ENST00000608158 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
CTCFL-215ENST00000608158 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.84
CTCFL-215ENST00000608158 KRTAP10-4P60372 401 aaPredicted RBP9.77□□□□□ -0.85
CTCFL-215ENST00000608158 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
CTCFL-215ENST00000608158 Q8N9L7 120 aa9.77□□□□□ -0.85
CTCFL-215ENST00000608158 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
CTCFL-215ENST00000608158 IGKV4-1P06312 121 aa9.75□□□□□ -0.85
CTCFL-215ENST00000608158 EPPK1P58107 5090 aaKnown RBP9.74□□□□□ -0.85
CTCFL-215ENST00000608158 DSCR10P59022 87 aa9.74□□□□□ -0.85
CTCFL-215ENST00000608158 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
CTCFL-215ENST00000608158 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
CTCFL-215ENST00000608158 DEFB116Q30KQ4 102 aa9.72□□□□□ -0.85
CTCFL-215ENST00000608158 LINC00472Q9H8W2 130 aa9.72□□□□□ -0.85
CTCFL-215ENST00000608158 CD164Q04900 197 aa9.71□□□□□ -0.86
CTCFL-215ENST00000608158 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
CTCFL-215ENST00000608158 K7EQZ3 153 aa9.7□□□□□ -0.86
CTCFL-215ENST00000608158 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
CTCFL-215ENST00000608158 ATOX1O00244 68 aa9.69□□□□□ -0.86
CTCFL-215ENST00000608158 HSPG2P98160 4391 aa9.68□□□□□ -0.86
CTCFL-215ENST00000608158 Q96NJ1 140 aa9.67□□□□□ -0.86
CTCFL-215ENST00000608158 RYR1P21817 5038 aa9.65□□□□□ -0.86
CTCFL-215ENST00000608158 J3KT08 172 aa9.64□□□□□ -0.87
CTCFL-215ENST00000608158 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
CTCFL-215ENST00000608158 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
CTCFL-215ENST00000608158 A8MWP4 228 aa9.63□□□□□ -0.87
CTCFL-215ENST00000608158 PRR26Q8N8Z3 221 aa9.62□□□□□ -0.87
CTCFL-215ENST00000608158 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
CTCFL-215ENST00000608158 Q5VSD8 79 aa9.6□□□□□ -0.87
CTCFL-215ENST00000608158 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
CTCFL-215ENST00000608158 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
CTCFL-215ENST00000608158 Q5XG85 94 aa9.57□□□□□ -0.88
CTCFL-215ENST00000608158 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
CTCFL-215ENST00000608158 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
CTCFL-215ENST00000608158 NDUFB1O75438 58 aa9.55□□□□□ -0.88
CTCFL-215ENST00000608158 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
CTCFL-215ENST00000608158 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
CTCFL-215ENST00000608158 KIAA1109Q2LD37 5005 aa9.54□□□□□ -0.88
CTCFL-215ENST00000608158 LINC00304Q8N9R0 145 aa9.54□□□□□ -0.88
CTCFL-215ENST00000608158 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
CTCFL-215ENST00000608158 COX7CP15954 63 aa9.53□□□□□ -0.88
CTCFL-215ENST00000608158 SMIM20Q8N5G0 67 aa9.53□□□□□ -0.88
CTCFL-215ENST00000608158 SPINK1P00995 79 aa9.52□□□□□ -0.89
CTCFL-215ENST00000608158 WFDC13Q8IUB5 93 aa9.52□□□□□ -0.89
CTCFL-215ENST00000608158 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
CTCFL-215ENST00000608158 A0A1B0GVX0 72 aa9.51□□□□□ -0.89
CTCFL-215ENST00000608158 UQCRQO14949 82 aa9.51□□□□□ -0.89
CTCFL-215ENST00000608158 MMP24-AS1A0A0U1RRL7 71 aa9.5□□□□□ -0.89
CTCFL-215ENST00000608158 KRTAP17-1Q9BYP8 105 aa9.5□□□□□ -0.89
CTCFL-215ENST00000608158 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms