RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
CDCA3-212ENST00000604599 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
CDCA3-212ENST00000604599 SMR3AQ99954 134 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
CDCA3-212ENST00000604599 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
CDCA3-212ENST00000604599 KTN1-AS1Q86SY8 53 aa7.86□□□□□ -1.15
CDCA3-212ENST00000604599 A6NED7 52 aa7.86□□□□□ -1.15
CDCA3-212ENST00000604599 LCA10Q71F78 164 aa7.86□□□□□ -1.15
CDCA3-212ENST00000604599 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
CDCA3-212ENST00000604599 PRLHP81277 87 aa7.85□□□□□ -1.15
CDCA3-212ENST00000604599 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
CDCA3-212ENST00000604599 H3BNG1 76 aa7.85□□□□□ -1.15
CDCA3-212ENST00000604599 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
CDCA3-212ENST00000604599 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
CDCA3-212ENST00000604599 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
CDCA3-212ENST00000604599 COA5Q86WW8 74 aa7.82□□□□□ -1.16
CDCA3-212ENST00000604599 C9orf163Q8N9P6 203 aa7.82□□□□□ -1.16
CDCA3-212ENST00000604599 Q75L30 129 aa7.81□□□□□ -1.16
CDCA3-212ENST00000604599 H3BPC8 53 aa7.8□□□□□ -1.16
CDCA3-212ENST00000604599 ATP11AUNQ6ZP68 121 aa7.8□□□□□ -1.16
CDCA3-212ENST00000604599 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
CDCA3-212ENST00000604599 DEFB131BA0A096LNP1 70 aa7.78□□□□□ -1.16
CDCA3-212ENST00000604599 LOC101927531A0A1B0GV80 90 aa7.77□□□□□ -1.17
CDCA3-212ENST00000604599 A6NN06 94 aa7.77□□□□□ -1.17
CDCA3-212ENST00000604599 A8MWP4 228 aa7.76□□□□□ -1.17
CDCA3-212ENST00000604599 IGLV8-61A0A075B6I0 122 aa7.76□□□□□ -1.17
CDCA3-212ENST00000604599 H0Y9J4 135 aa7.76□□□□□ -1.17
CDCA3-212ENST00000604599 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
CDCA3-212ENST00000604599 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
CDCA3-212ENST00000604599 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
CDCA3-212ENST00000604599 A0A096LNI7 61 aa7.75□□□□□ -1.17
CDCA3-212ENST00000604599 FLNBO75369 2602 aaKnown RBP7.74□□□□□ -1.17
CDCA3-212ENST00000604599 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
CDCA3-212ENST00000604599 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
CDCA3-212ENST00000604599 LINC00472Q9H8W2 130 aa7.73□□□□□ -1.17
CDCA3-212ENST00000604599 FBN1P35555 2871 aaKnown RBP7.73□□□□□ -1.17
CDCA3-212ENST00000604599 NDUFS5O43920 106 aa7.72□□□□□ -1.17
CDCA3-212ENST00000604599 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
CDCA3-212ENST00000604599 NSD1Q96L73 2696 aaPredicted RBP7.71□□□□□ -1.17
CDCA3-212ENST00000604599 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.17
CDCA3-212ENST00000604599 PHF5AQ7RTV0 110 aaKnown RBP7.71□□□□□ -1.18
CDCA3-212ENST00000604599 C11orf45Q8TAV5 145 aa7.71□□□□□ -1.18
CDCA3-212ENST00000604599 TENM2Q9NT68 2774 aa7.7□□□□□ -1.18
CDCA3-212ENST00000604599 MOBPQ13875 183 aa7.7□□□□□ -1.18
CDCA3-212ENST00000604599 SPINK7P58062 85 aa7.68□□□□□ -1.18
CDCA3-212ENST00000604599 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
CDCA3-212ENST00000604599 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
CDCA3-212ENST00000604599 ANK2Q01484 3957 aa7.67□□□□□ -1.18
CDCA3-212ENST00000604599 KRTAP11-1Q8IUC1 163 aa7.66□□□□□ -1.18
CDCA3-212ENST00000604599 INAFM1C9JVW0 142 aa7.66□□□□□ -1.18
CDCA3-212ENST00000604599 KRTAP10-11P60412 298 aa7.65□□□□□ -1.18
CDCA3-212ENST00000604599 J3QKU1 62 aa7.65□□□□□ -1.19
CDCA3-212ENST00000604599 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
CDCA3-212ENST00000604599 MAST4O15021 2626 aa7.64□□□□□ -1.19
CDCA3-212ENST00000604599 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
CDCA3-212ENST00000604599 DNAH1Q9P2D7 4330 aa7.63□□□□□ -1.19
CDCA3-212ENST00000604599 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
CDCA3-212ENST00000604599 HRES1P13985 223 aa7.62□□□□□ -1.19
CDCA3-212ENST00000604599 NOTCH1P46531 2555 aa7.62□□□□□ -1.19
CDCA3-212ENST00000604599 DNAH10Q8IVF4 4471 aa7.61□□□□□ -1.19
CDCA3-212ENST00000604599 SPRR1BP22528 89 aa7.6□□□□□ -1.19
CDCA3-212ENST00000604599 COL6A5A8TX70 2615 aa7.59□□□□□ -1.19
CDCA3-212ENST00000604599 TP53AIP1Q9HCN2 124 aa7.59□□□□□ -1.19
CDCA3-212ENST00000604599 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
CDCA3-212ENST00000604599 KMT2BQ9UMN6 2715 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-212ENST00000604599 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
CDCA3-212ENST00000604599 Q6ZR54 194 aa7.57□□□□□ -1.2
CDCA3-212ENST00000604599 Q96NJ1 140 aa7.57□□□□□ -1.2
CDCA3-212ENST00000604599 IGHV6-1A0A0B4J1U7 121 aa7.57□□□□□ -1.2
CDCA3-212ENST00000604599 IGLV9-49A0A0B4J1Y8 123 aa7.57□□□□□ -1.2
CDCA3-212ENST00000604599 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
CDCA3-212ENST00000604599 NBEAL1Q6ZS30 2694 aa7.56□□□□□ -1.2
CDCA3-212ENST00000604599 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
CDCA3-212ENST00000604599 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
CDCA3-212ENST00000604599 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
CDCA3-212ENST00000604599 LINC00313P59037 77 aa7.53□□□□□ -1.2
CDCA3-212ENST00000604599 K7EIL1 84 aa7.51□□□□□ -1.21
CDCA3-212ENST00000604599 A0A087X002 238 aa7.51□□□□□ -1.21
CDCA3-212ENST00000604599 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
CDCA3-212ENST00000604599 LYSTQ99698 3801 aa7.5□□□□□ -1.21
CDCA3-212ENST00000604599 A0A1B0GVX0 72 aa7.5□□□□□ -1.21
CDCA3-212ENST00000604599 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
CDCA3-212ENST00000604599 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
CDCA3-212ENST00000604599 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
CDCA3-212ENST00000604599 CDK2AP2O75956 126 aa7.48□□□□□ -1.21
CDCA3-212ENST00000604599 DNAH9Q9NYC9 4486 aa7.46□□□□□ -1.21
CDCA3-212ENST00000604599 MDFIQ99750 246 aa7.46□□□□□ -1.21
CDCA3-212ENST00000604599 PANO1I0J062 215 aa7.45□□□□□ -1.22
CDCA3-212ENST00000604599 Q5W150 140 aa7.44□□□□□ -1.22
CDCA3-212ENST00000604599 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
CDCA3-212ENST00000604599 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
CDCA3-212ENST00000604599 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
CDCA3-212ENST00000604599 ANAPC11Q9NYG5 84 aa7.41□□□□□ -1.22
CDCA3-212ENST00000604599 ACYP2P14621 99 aa7.39□□□□□ -1.23
CDCA3-212ENST00000604599 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms