RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 KRTAP1-1Q07627 177 aa4.13□□□□□ -1.75
SRGAP2-211ENST00000604423 UNC79Q9P2D8 2635 aa4.13□□□□□ -1.75
SRGAP2-211ENST00000604423 GCN1Q92616 2671 aaKnown RBP4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 J3QKU1 62 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 KRTAP10-9P60411 292 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 FLNBO75369 2602 aaKnown RBP4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 POLQO75417 2590 aa4.12□□□□□ -1.75
SRGAP2-211ENST00000604423 A0A087WSZ3 146 aa4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 APCP25054 2843 aa4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 SPRR1AP35321 89 aa4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 COA5Q86WW8 74 aa4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 TEX15Q9BXT5 2789 aa4.11□□□□□ -1.75
SRGAP2-211ENST00000604423 FBN2P35556 2912 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 NAV2Q8IVL1 2488 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 UTP20O75691 2785 aaKnown RBP4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
SRGAP2-211ENST00000604423 IGLV5-37A0A075B6J1 123 aa4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 SONP18583 2426 aaKnown RBP4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 IGSF10Q6WRI0 2623 aa4.09□□□□□ -1.75
SRGAP2-211ENST00000604423 A6NN06 94 aa4.09□□□□□ -1.76
SRGAP2-211ENST00000604423 LCA10Q71F78 164 aa4.09□□□□□ -1.76
SRGAP2-211ENST00000604423 H3BNG1 76 aa4.08□□□□□ -1.76
SRGAP2-211ENST00000604423 C9orf163Q8N9P6 203 aa4.08□□□□□ -1.76
SRGAP2-211ENST00000604423 HELZ2Q9BYK8 2649 aaKnown RBP4.08□□□□□ -1.76
SRGAP2-211ENST00000604423 KRTAP29-1A8MX34 341 aaPredicted RBP4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 LINC01556Q5JQF7 62 aa4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 SETD2Q9BYW2 2564 aaPredicted RBP4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 A0A0G2JQZ4 141 aa4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
SRGAP2-211ENST00000604423 IGLV7-46A0A075B6I9 117 aa4.06□□□□□ -1.76
SRGAP2-211ENST00000604423 A8MWP4 228 aa4.06□□□□□ -1.76
SRGAP2-211ENST00000604423 CFAP46Q8IYW2 2715 aa4.06□□□□□ -1.76
SRGAP2-211ENST00000604423 NIPBLQ6KC79 2804 aaeCLIP4.06□□□□□ -1.76
SRGAP2-211ENST00000604423 H0Y9J4 135 aa4.05□□□□□ -1.76
SRGAP2-211ENST00000604423 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
SRGAP2-211ENST00000604423 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
SRGAP2-211ENST00000604423 FLNCQ14315 2725 aa4.05□□□□□ -1.76
SRGAP2-211ENST00000604423 KRTAP10-3P60369 221 aa4.05□□□□□ -1.76
SRGAP2-211ENST00000604423 IGLV8-61A0A075B6I0 122 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 PRLHP81277 87 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 MOBPQ13875 183 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 ZNF469Q96JG9 3925 aaPredicted RBP4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 MYO18BQ8IUG5 2567 aa4.04□□□□□ -1.76
SRGAP2-211ENST00000604423 ZNF462Q96JM2 2506 aa4.03□□□□□ -1.76
SRGAP2-211ENST00000604423 NF1P21359 2839 aa4.03□□□□□ -1.76
SRGAP2-211ENST00000604423 ABCA12Q86UK0 2595 aa4.03□□□□□ -1.76
SRGAP2-211ENST00000604423 ITPR3Q14573 2671 aa4.03□□□□□ -1.76
SRGAP2-211ENST00000604423 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
SRGAP2-211ENST00000604423 HIVEP2P31629 2446 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 TENM4Q6N022 2769 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 CENPEQ02224 2701 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 HECTD1Q9ULT8 2610 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 CCDC168Q8NDH2 2452 aa4.01□□□□□ -1.77
SRGAP2-211ENST00000604423 DEFB131BA0A096LNP1 70 aa4□□□□□ -1.77
SRGAP2-211ENST00000604423 FLNAP21333 2647 aaKnown RBP4□□□□□ -1.77
SRGAP2-211ENST00000604423 SPINK7P58062 85 aa4□□□□□ -1.77
SRGAP2-211ENST00000604423 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
SRGAP2-211ENST00000604423 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
SRGAP2-211ENST00000604423 ANK3Q12955 4377 aaKnown RBP3.99□□□□□ -1.77
SRGAP2-211ENST00000604423 IGKV2-24A0A0C4DH68 120 aa3.99□□□□□ -1.77
SRGAP2-211ENST00000604423 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
SRGAP2-211ENST00000604423 CASC10Q5T4H9 136 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 C11orf45Q8TAV5 145 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 A0A096LNI7 61 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 HRES1P13985 223 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 LINC00313P59037 77 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 Q6ZR54 194 aa3.97□□□□□ -1.77
SRGAP2-211ENST00000604423 MTORP42345 2549 aa3.96□□□□□ -1.78
SRGAP2-211ENST00000604423 SPRR1BP22528 89 aa3.95□□□□□ -1.78
SRGAP2-211ENST00000604423 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
SRGAP2-211ENST00000604423 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
SRGAP2-211ENST00000604423 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
SRGAP2-211ENST00000604423 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
SRGAP2-211ENST00000604423 HIVEP1P15822 2718 aa3.93□□□□□ -1.78
SRGAP2-211ENST00000604423 SMR3AQ99954 134 aa3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 F8P00451 2351 aa3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 UBR5O95071 2799 aaPredicted RBP3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms