RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 DPM2O94777 84 aa5.87□□□□□ -1.47
PDLIM1P1-201ENST00000604187 CLLU1Q5K131 121 aa5.87□□□□□ -1.47
PDLIM1P1-201ENST00000604187 HSBP1O75506 76 aa5.86□□□□□ -1.47
PDLIM1P1-201ENST00000604187 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
PDLIM1P1-201ENST00000604187 LITAFQ99732 161 aa5.86□□□□□ -1.47
PDLIM1P1-201ENST00000604187 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
PDLIM1P1-201ENST00000604187 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
PDLIM1P1-201ENST00000604187 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
PDLIM1P1-201ENST00000604187 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
PDLIM1P1-201ENST00000604187 F8WEM9 126 aa5.84□□□□□ -1.47
PDLIM1P1-201ENST00000604187 IGKCP01834 107 aa5.84□□□□□ -1.47
PDLIM1P1-201ENST00000604187 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
PDLIM1P1-201ENST00000604187 LEPROTL1O95214 131 aa5.83□□□□□ -1.48
PDLIM1P1-201ENST00000604187 LINC00518Q8N0U6 118 aa5.82□□□□□ -1.48
PDLIM1P1-201ENST00000604187 A8MUU9 505 aa5.81□□□□□ -1.48
PDLIM1P1-201ENST00000604187 E9PLD3 99 aa5.81□□□□□ -1.48
PDLIM1P1-201ENST00000604187 CLEC2BQ92478 149 aa5.81□□□□□ -1.48
PDLIM1P1-201ENST00000604187 TIMM17BO60830 172 aa5.8□□□□□ -1.48
PDLIM1P1-201ENST00000604187 Q6JHZ5 121 aa5.79□□□□□ -1.48
PDLIM1P1-201ENST00000604187 LST1O00453 97 aa5.78□□□□□ -1.48
PDLIM1P1-201ENST00000604187 SERF1AO75920 110 aa5.78□□□□□ -1.48
PDLIM1P1-201ENST00000604187 FABP4P15090 132 aa5.78□□□□□ -1.48
PDLIM1P1-201ENST00000604187 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
PDLIM1P1-201ENST00000604187 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
PDLIM1P1-201ENST00000604187 A4D1N5 150 aa5.77□□□□□ -1.49
PDLIM1P1-201ENST00000604187 A6NDN8 102 aa5.77□□□□□ -1.49
PDLIM1P1-201ENST00000604187 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
PDLIM1P1-201ENST00000604187 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
PDLIM1P1-201ENST00000604187 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
PDLIM1P1-201ENST00000604187 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
PDLIM1P1-201ENST00000604187 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
PDLIM1P1-201ENST00000604187 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
PDLIM1P1-201ENST00000604187 HRES1P13985 223 aa5.75□□□□□ -1.49
PDLIM1P1-201ENST00000604187 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
PDLIM1P1-201ENST00000604187 SLC7A5P1Q8MH63 180 aa5.74□□□□□ -1.49
PDLIM1P1-201ENST00000604187 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
PDLIM1P1-201ENST00000604187 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
PDLIM1P1-201ENST00000604187 TTTY13Q9BZ97 58 aa5.73□□□□□ -1.49
PDLIM1P1-201ENST00000604187 OCIAD2Q56VL3 154 aa5.72□□□□□ -1.49
PDLIM1P1-201ENST00000604187 YPEL4Q96NS1 127 aa5.72□□□□□ -1.49
PDLIM1P1-201ENST00000604187 APOC3P02656 99 aa5.71□□□□□ -1.5
PDLIM1P1-201ENST00000604187 DSCR10P59022 87 aa5.71□□□□□ -1.5
PDLIM1P1-201ENST00000604187 Q6ZQY7 126 aa5.71□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SMIM11BQ8TCY0 68 aa5.7□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SS18L2Q9UHA2 77 aa5.69□□□□□ -1.5
PDLIM1P1-201ENST00000604187 H3BUT2 72 aa5.68□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SNAPINO95295 136 aa5.68□□□□□ -1.5
PDLIM1P1-201ENST00000604187 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
PDLIM1P1-201ENST00000604187 TRGC2P03986 189 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 Q6ZVH6 145 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SVBPQ8N300 66 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 KMT2DO14686 5537 aa5.67□□□□□ -1.5
PDLIM1P1-201ENST00000604187 IFITM1P13164 125 aa5.66□□□□□ -1.5
PDLIM1P1-201ENST00000604187 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
PDLIM1P1-201ENST00000604187 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
PDLIM1P1-201ENST00000604187 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
PDLIM1P1-201ENST00000604187 VAMP3Q15836 100 aa5.65□□□□□ -1.5
PDLIM1P1-201ENST00000604187 MUSTN1Q8IVN3 82 aa5.65□□□□□ -1.5
PDLIM1P1-201ENST00000604187 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
PDLIM1P1-201ENST00000604187 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
PDLIM1P1-201ENST00000604187 A8MWP4 228 aa5.63□□□□□ -1.51
PDLIM1P1-201ENST00000604187 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
PDLIM1P1-201ENST00000604187 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
PDLIM1P1-201ENST00000604187 SCGB1D1O95968 90 aa5.62□□□□□ -1.51
PDLIM1P1-201ENST00000604187 A0A087WSZ3 146 aa5.61□□□□□ -1.51
PDLIM1P1-201ENST00000604187 LINC01545Q5VT33 79 aa5.61□□□□□ -1.51
PDLIM1P1-201ENST00000604187 COLCA2A8K830 154 aa5.6□□□□□ -1.51
PDLIM1P1-201ENST00000604187 LINC00313P59037 77 aa5.6□□□□□ -1.51
PDLIM1P1-201ENST00000604187 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
PDLIM1P1-201ENST00000604187 PPDPFLQ8WWR9 84 aa5.6□□□□□ -1.51
PDLIM1P1-201ENST00000604187 TEN1Q86WV5 123 aa5.58□□□□□ -1.52
PDLIM1P1-201ENST00000604187 PET117Q6UWS5 81 aa5.57□□□□□ -1.52
PDLIM1P1-201ENST00000604187 IGKV4-1P06312 121 aa5.53□□□□□ -1.52
PDLIM1P1-201ENST00000604187 SPINK7P58062 85 aa5.52□□□□□ -1.53
PDLIM1P1-201ENST00000604187 A6NN06 94 aa5.51□□□□□ -1.53
PDLIM1P1-201ENST00000604187 IGHV6-1A0A0B4J1U7 121 aa5.5□□□□□ -1.53
PDLIM1P1-201ENST00000604187 C3orf79P0CE67 100 aa5.5□□□□□ -1.53
PDLIM1P1-201ENST00000604187 NDUFV3P56181 108 aaKnown RBP5.5□□□□□ -1.53
PDLIM1P1-201ENST00000604187 C12orf57Q99622 126 aa5.5□□□□□ -1.53
PDLIM1P1-201ENST00000604187 BVES-AS1Q5T3Y7 98 aa5.49□□□□□ -1.53
PDLIM1P1-201ENST00000604187 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
PDLIM1P1-201ENST00000604187 KRTDAPP60985 99 aa5.48□□□□□ -1.53
PDLIM1P1-201ENST00000604187 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
PDLIM1P1-201ENST00000604187 ZCCHC13Q8WW36 166 aaKnown RBP5.48□□□□□ -1.53
PDLIM1P1-201ENST00000604187 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
PDLIM1P1-201ENST00000604187 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
PDLIM1P1-201ENST00000604187 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
PDLIM1P1-201ENST00000604187 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
PDLIM1P1-201ENST00000604187 H3BMG7 143 aa5.46□□□□□ -1.54
PDLIM1P1-201ENST00000604187 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BKO60814 126 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BJP06899 126 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BOP23527 126 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BBP33778 126 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BDP58876 126 aa5.44□□□□□ -1.54
PDLIM1P1-201ENST00000604187 HIST1H2BCP62807 126 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms