RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 XGP55808 180 aa13.64□□□□□ -0.23
PPFIA3-211ENST00000602848 LINC00643Q86TS7 51 aa13.62□□□□□ -0.23
PPFIA3-211ENST00000602848 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
PPFIA3-211ENST00000602848 ZNF706Q9Y5V0 76 aaPredicted RBP13.62□□□□□ -0.23
PPFIA3-211ENST00000602848 LINC00846Q9NV44 126 aa13.61□□□□□ -0.23
PPFIA3-211ENST00000602848 IGLV8-61A0A075B6I0 122 aa13.61□□□□□ -0.23
PPFIA3-211ENST00000602848 A0A1B0GW54 56 aa13.61□□□□□ -0.23
PPFIA3-211ENST00000602848 PKHD1P08F94 4074 aa13.61□□□□□ -0.23
PPFIA3-211ENST00000602848 DYNC1H1Q14204 4646 aaKnown RBP13.6□□□□□ -0.23
PPFIA3-211ENST00000602848 IGLV7-43P04211 117 aa13.6□□□□□ -0.23
PPFIA3-211ENST00000602848 DNAH5Q8TE73 4624 aa13.59□□□□□ -0.23
PPFIA3-211ENST00000602848 DNAH8Q96JB1 4490 aa13.57□□□□□ -0.24
PPFIA3-211ENST00000602848 MT-ATP8P03928 68 aa13.57□□□□□ -0.24
PPFIA3-211ENST00000602848 SPRR4Q96PI1 79 aa13.57□□□□□ -0.24
PPFIA3-211ENST00000602848 LINC00483Q53H64 154 aa13.55□□□□□ -0.24
PPFIA3-211ENST00000602848 UBL5Q9BZL1 73 aa13.55□□□□□ -0.24
PPFIA3-211ENST00000602848 Q6JHZ5 121 aa13.53□□□□□ -0.24
PPFIA3-211ENST00000602848 Q8NBF4 154 aa13.5□□□□□ -0.25
PPFIA3-211ENST00000602848 IMUPQ9GZP8 106 aa13.49□□□□□ -0.25
PPFIA3-211ENST00000602848 LRP1BQ9NZR2 4599 aa13.48□□□□□ -0.25
PPFIA3-211ENST00000602848 BIRC6Q9NR09 4857 aa13.48□□□□□ -0.25
PPFIA3-211ENST00000602848 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
PPFIA3-211ENST00000602848 Q6Q795 121 aa13.48□□□□□ -0.25
PPFIA3-211ENST00000602848 TRBV7-7A0A0K0K1E9 115 aa13.47□□□□□ -0.25
PPFIA3-211ENST00000602848 A0A1W2PNM2 257 aa13.47□□□□□ -0.25
PPFIA3-211ENST00000602848 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
PPFIA3-211ENST00000602848 RPL37AP61513 92 aaKnown RBP13.46□□□□□ -0.25
PPFIA3-211ENST00000602848 IGFL1Q6UW32 110 aa13.46□□□□□ -0.25
PPFIA3-211ENST00000602848 CRYGAP11844 174 aa13.43□□□□□ -0.26
PPFIA3-211ENST00000602848 HAMPP81172 84 aa13.43□□□□□ -0.26
PPFIA3-211ENST00000602848 Q6ZVQ6 151 aa13.43□□□□□ -0.26
PPFIA3-211ENST00000602848 NREPQ16612 68 aa13.38□□□□□ -0.27
PPFIA3-211ENST00000602848 CXCL6P80162 114 aa13.35□□□□□ -0.27
PPFIA3-211ENST00000602848 APOBP04114 4563 aaKnown RBP13.35□□□□□ -0.27
PPFIA3-211ENST00000602848 IGKV3D-7A0A0C4DH55 119 aa13.34□□□□□ -0.27
PPFIA3-211ENST00000602848 IGLV9-49A0A0B4J1Y8 123 aa13.33□□□□□ -0.28
PPFIA3-211ENST00000602848 C9orf153Q5TBE3 101 aa13.33□□□□□ -0.28
PPFIA3-211ENST00000602848 KIAA1109Q2LD37 5005 aa13.3□□□□□ -0.28
PPFIA3-211ENST00000602848 A0A0G2JQZ4 141 aa13.3□□□□□ -0.28
PPFIA3-211ENST00000602848 FAM229BQ4G0N7 80 aa13.3□□□□□ -0.28
PPFIA3-211ENST00000602848 SRRM2Q9UQ35 2752 aaKnown RBP13.29□□□□□ -0.28
PPFIA3-211ENST00000602848 SSBP3-AS1Q7Z2R9 100 aa13.27□□□□□ -0.29
PPFIA3-211ENST00000602848 ANAPC11Q9NYG5 84 aa13.27□□□□□ -0.29
PPFIA3-211ENST00000602848 RYR1P21817 5038 aa13.27□□□□□ -0.29
PPFIA3-211ENST00000602848 MOBPQ13875 183 aa13.26□□□□□ -0.29
PPFIA3-211ENST00000602848 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
PPFIA3-211ENST00000602848 A0A087WSZ3 146 aa13.24□□□□□ -0.29
PPFIA3-211ENST00000602848 BPY2O14599 106 aa13.24□□□□□ -0.29
PPFIA3-211ENST00000602848 HSPG2P98160 4391 aa13.23□□□□□ -0.29
PPFIA3-211ENST00000602848 HIST1H4AP62805 103 aaKnown RBP13.21□□□□□ -0.29
PPFIA3-211ENST00000602848 PCP4P48539 62 aa13.2□□□□□ -0.3
PPFIA3-211ENST00000602848 CDK2AP2O75956 126 aa13.19□□□□□ -0.3
PPFIA3-211ENST00000602848 CD164Q04900 197 aa13.19□□□□□ -0.3
PPFIA3-211ENST00000602848 SMR3BP02814 79 aaPredicted RBP13.18□□□□□ -0.3
PPFIA3-211ENST00000602848 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
PPFIA3-211ENST00000602848 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
PPFIA3-211ENST00000602848 HERC2O95714 4834 aa13.15□□□□□ -0.3
PPFIA3-211ENST00000602848 FAM236AA0A1B0GUQ0 79 aa13.15□□□□□ -0.3
PPFIA3-211ENST00000602848 FAM236BA0A1B0GV22 79 aa13.15□□□□□ -0.3
PPFIA3-211ENST00000602848 KRTAP17-1Q9BYP8 105 aa13.13□□□□□ -0.31
PPFIA3-211ENST00000602848 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
PPFIA3-211ENST00000602848 A0A087WVE0 104 aa13.11□□□□□ -0.31
PPFIA3-211ENST00000602848 A0A087X002 238 aa13.11□□□□□ -0.31
PPFIA3-211ENST00000602848 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
PPFIA3-211ENST00000602848 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
PPFIA3-211ENST00000602848 LINC00472Q9H8W2 130 aa13.1□□□□□ -0.31
PPFIA3-211ENST00000602848 J3KT08 172 aa13.09□□□□□ -0.31
PPFIA3-211ENST00000602848 IGKV4-1P06312 121 aa13.08□□□□□ -0.32
PPFIA3-211ENST00000602848 DSCR10P59022 87 aa13.07□□□□□ -0.32
PPFIA3-211ENST00000602848 FAT1Q14517 4588 aa13.07□□□□□ -0.32
PPFIA3-211ENST00000602848 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
PPFIA3-211ENST00000602848 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
PPFIA3-211ENST00000602848 ATOX1O00244 68 aa13.06□□□□□ -0.32
PPFIA3-211ENST00000602848 ANAPC13Q9BS18 74 aa13.06□□□□□ -0.32
PPFIA3-211ENST00000602848 VPS13BQ7Z7G8 4022 aa13.05□□□□□ -0.32
PPFIA3-211ENST00000602848 Q8N9L7 120 aa13.01□□□□□ -0.33
PPFIA3-211ENST00000602848 ASB16-AS1Q495Z4 193 aa13□□□□□ -0.33
PPFIA3-211ENST00000602848 Q5XG85 94 aa12.99□□□□□ -0.33
PPFIA3-211ENST00000602848 TYMSOSQ8TAI1 123 aa12.99□□□□□ -0.33
PPFIA3-211ENST00000602848 DEFB116Q30KQ4 102 aa12.99□□□□□ -0.33
PPFIA3-211ENST00000602848 Q96NJ1 140 aa12.99□□□□□ -0.33
PPFIA3-211ENST00000602848 A8MWP4 228 aa12.98□□□□□ -0.33
PPFIA3-211ENST00000602848 K7EQZ3 153 aa12.97□□□□□ -0.33
PPFIA3-211ENST00000602848 Q8N1X5 172 aa12.96□□□□□ -0.33
PPFIA3-211ENST00000602848 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
PPFIA3-211ENST00000602848 NDUFB1O75438 58 aa12.94□□□□□ -0.34
PPFIA3-211ENST00000602848 C4orf48Q5BLP8 95 aa12.94□□□□□ -0.34
PPFIA3-211ENST00000602848 PRR15Q8IV56 129 aa12.93□□□□□ -0.34
PPFIA3-211ENST00000602848 KRTAP4-5Q9BYR2 181 aa12.92□□□□□ -0.34
PPFIA3-211ENST00000602848 LIMD2Q9BT23 127 aa12.91□□□□□ -0.34
PPFIA3-211ENST00000602848 SPINK1P00995 79 aa12.91□□□□□ -0.34
PPFIA3-211ENST00000602848 SPAG11AQ6PDA7 123 aa12.91□□□□□ -0.34
PPFIA3-211ENST00000602848 PRR26Q8N8Z3 221 aa12.91□□□□□ -0.34
PPFIA3-211ENST00000602848 Q5VSD8 79 aa12.89□□□□□ -0.35
PPFIA3-211ENST00000602848 HCG22E2RYF7 251 aa12.88□□□□□ -0.35
PPFIA3-211ENST00000602848 RPS29P62273 56 aaKnown RBP12.88□□□□□ -0.35
PPFIA3-211ENST00000602848 SERP2Q8N6R1 65 aa12.88□□□□□ -0.35
PPFIA3-211ENST00000602848 LINC00304Q8N9R0 145 aa12.84□□□□□ -0.35
PPFIA3-211ENST00000602848 TRAV7A0A075B6U4 112 aa12.84□□□□□ -0.35
PPFIA3-211ENST00000602848 COX7CP15954 63 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms