RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 COX6B2Q6YFQ2 88 aa12.22□□□□□ -0.45
GTPBP3-227ENST00000602056 F8WEM9 126 aa12.2□□□□□ -0.46
GTPBP3-227ENST00000602056 Q6ZQY7 126 aa12.2□□□□□ -0.46
GTPBP3-227ENST00000602056 VAMP3Q15836 100 aa12.18□□□□□ -0.46
GTPBP3-227ENST00000602056 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
GTPBP3-227ENST00000602056 TRBV7-7A0A0K0K1E9 115 aa12.17□□□□□ -0.46
GTPBP3-227ENST00000602056 hADV29S1A0JD25 119 aa12.16□□□□□ -0.46
GTPBP3-227ENST00000602056 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
GTPBP3-227ENST00000602056 Q6JHZ5 121 aa12.16□□□□□ -0.46
GTPBP3-227ENST00000602056 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
GTPBP3-227ENST00000602056 OCIAD2Q56VL3 154 aa12.13□□□□□ -0.47
GTPBP3-227ENST00000602056 OBSCN-AS1Q96MR7 158 aa12.11□□□□□ -0.47
GTPBP3-227ENST00000602056 Q75L30 129 aa12.09□□□□□ -0.47
GTPBP3-227ENST00000602056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.07□□□□□ -0.48
GTPBP3-227ENST00000602056 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
GTPBP3-227ENST00000602056 HIST1H2BLQ99880 126 aa12.07□□□□□ -0.48
GTPBP3-227ENST00000602056 ATP11AUNQ6ZP68 121 aa12.05□□□□□ -0.48
GTPBP3-227ENST00000602056 H3BUT2 72 aa12.04□□□□□ -0.48
GTPBP3-227ENST00000602056 C12orf57Q99622 126 aa12.04□□□□□ -0.48
GTPBP3-227ENST00000602056 Q6Q795 121 aa12.02□□□□□ -0.49
GTPBP3-227ENST00000602056 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
GTPBP3-227ENST00000602056 PPDPFLQ8WWR9 84 aa12.01□□□□□ -0.49
GTPBP3-227ENST00000602056 SNHG12Q9BXW3 62 aa12□□□□□ -0.49
GTPBP3-227ENST00000602056 LST1O00453 97 aa11.99□□□□□ -0.49
GTPBP3-227ENST00000602056 BVES-AS1Q5T3Y7 98 aa11.99□□□□□ -0.49
GTPBP3-227ENST00000602056 Q96NJ1 140 aa11.97□□□□□ -0.49
GTPBP3-227ENST00000602056 S100A2P29034 98 aa11.96□□□□□ -0.49
GTPBP3-227ENST00000602056 HIST1H4GQ99525 98 aa11.95□□□□□ -0.5
GTPBP3-227ENST00000602056 C20orf166-AS1Q96NR2 134 aa11.93□□□□□ -0.5
GTPBP3-227ENST00000602056 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
GTPBP3-227ENST00000602056 A8MUU9 505 aa11.9□□□□□ -0.5
GTPBP3-227ENST00000602056 CFC1P0CG37 223 aa11.89□□□□□ -0.51
GTPBP3-227ENST00000602056 COX8AP10176 69 aa11.89□□□□□ -0.51
GTPBP3-227ENST00000602056 FAM218AQ96MZ4 157 aa11.89□□□□□ -0.51
GTPBP3-227ENST00000602056 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
GTPBP3-227ENST00000602056 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
GTPBP3-227ENST00000602056 TEN1Q86WV5 123 aa11.86□□□□□ -0.51
GTPBP3-227ENST00000602056 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
GTPBP3-227ENST00000602056 A0A087WSZ3 146 aa11.84□□□□□ -0.51
GTPBP3-227ENST00000602056 DLEU1O43261 78 aa11.83□□□□□ -0.52
GTPBP3-227ENST00000602056 USH2AO75445 5202 aa11.81□□□□□ -0.52
GTPBP3-227ENST00000602056 H0YGX0 51 aa11.8□□□□□ -0.52
GTPBP3-227ENST00000602056 RAB37Q96AX2 223 aa11.8□□□□□ -0.52
GTPBP3-227ENST00000602056 S100A6P06703 90 aa11.79□□□□□ -0.52
GTPBP3-227ENST00000602056 DSCR10P59022 87 aa11.79□□□□□ -0.52
GTPBP3-227ENST00000602056 A0A0B4J2C4 111 aa11.78□□□□□ -0.52
GTPBP3-227ENST00000602056 C14orf144Q96I85 54 aa11.78□□□□□ -0.52
GTPBP3-227ENST00000602056 SSPOA2VEC9 5147 aa11.77□□□□□ -0.52
GTPBP3-227ENST00000602056 H3BMG7 143 aa11.77□□□□□ -0.53
GTPBP3-227ENST00000602056 KRTAP16-1A8MUX0 517 aa11.76□□□□□ -0.53
GTPBP3-227ENST00000602056 A0A1W2PNM2 257 aa11.75□□□□□ -0.53
GTPBP3-227ENST00000602056 SNCGO76070 127 aa11.75□□□□□ -0.53
GTPBP3-227ENST00000602056 HIGD1BQ9P298 99 aa11.75□□□□□ -0.53
GTPBP3-227ENST00000602056 TRBV20-1A0A075B6N2 111 aa11.73□□□□□ -0.53
GTPBP3-227ENST00000602056 C2orf91Q6ZV80 131 aa11.73□□□□□ -0.53
GTPBP3-227ENST00000602056 FABP2P12104 132 aa11.71□□□□□ -0.53
GTPBP3-227ENST00000602056 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.7□□□□□ -0.54
GTPBP3-227ENST00000602056 A0A1B0GX51 115 aa11.69□□□□□ -0.54
GTPBP3-227ENST00000602056 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
GTPBP3-227ENST00000602056 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
GTPBP3-227ENST00000602056 MT2AP02795 61 aa11.67□□□□□ -0.54
GTPBP3-227ENST00000602056 SPATA45Q537H7 98 aa11.66□□□□□ -0.54
GTPBP3-227ENST00000602056 NOTCH2NLQ7Z3S9 236 aa11.66□□□□□ -0.54
GTPBP3-227ENST00000602056 LINC00313P59037 77 aa11.65□□□□□ -0.54
GTPBP3-227ENST00000602056 CEND1Q8N111 149 aa11.65□□□□□ -0.54
GTPBP3-227ENST00000602056 PRO1854Q9UHT4 67 aa11.65□□□□□ -0.54
GTPBP3-227ENST00000602056 TRIAP1O43715 76 aa11.64□□□□□ -0.55
GTPBP3-227ENST00000602056 KRTAP9-7A8MTY7 169 aa11.63□□□□□ -0.55
GTPBP3-227ENST00000602056 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
GTPBP3-227ENST00000602056 GHRHP01286 108 aa11.62□□□□□ -0.55
GTPBP3-227ENST00000602056 IGKV4-1P06312 121 aa11.62□□□□□ -0.55
GTPBP3-227ENST00000602056 FXYD2P54710 66 aa11.62□□□□□ -0.55
GTPBP3-227ENST00000602056 TRBV7-4A0A0J9YYF1 115 aa11.6□□□□□ -0.55
GTPBP3-227ENST00000602056 HRES1P13985 223 aa11.6□□□□□ -0.55
GTPBP3-227ENST00000602056 S100A1P23297 94 aa11.6□□□□□ -0.55
GTPBP3-227ENST00000602056 MT1FP04733 61 aa11.59□□□□□ -0.55
GTPBP3-227ENST00000602056 ANKRD29Q8N6D5 301 aa11.59□□□□□ -0.55
GTPBP3-227ENST00000602056 A0A1B0GV72 72 aa11.58□□□□□ -0.56
GTPBP3-227ENST00000602056 FAM236DA0A1B0GTK5 79 aa11.57□□□□□ -0.56
GTPBP3-227ENST00000602056 FAM236CP0DP71 79 aa11.57□□□□□ -0.56
GTPBP3-227ENST00000602056 DEFB116Q30KQ4 102 aa11.57□□□□□ -0.56
GTPBP3-227ENST00000602056 VAMP8Q9BV40 100 aa11.57□□□□□ -0.56
GTPBP3-227ENST00000602056 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
GTPBP3-227ENST00000602056 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
GTPBP3-227ENST00000602056 A6NJY4 79 aa11.55□□□□□ -0.56
GTPBP3-227ENST00000602056 LCE2BO14633 110 aa11.55□□□□□ -0.56
GTPBP3-227ENST00000602056 ORMDL1Q9P0S3 153 aa11.53□□□□□ -0.56
GTPBP3-227ENST00000602056 FCGBPQ9Y6R7 5405 aaPredicted RBP11.52□□□□□ -0.57
GTPBP3-227ENST00000602056 KRTAP9-3Q9BYQ3 159 aa11.52□□□□□ -0.57
GTPBP3-227ENST00000602056 RBM12B-AS1Q9P1G2 102 aa11.5□□□□□ -0.57
GTPBP3-227ENST00000602056 IGHV6-1A0A0B4J1U7 121 aa11.49□□□□□ -0.57
GTPBP3-227ENST00000602056 K7ERJ3 54 aa11.49□□□□□ -0.57
GTPBP3-227ENST00000602056 DNAL4O96015 105 aa11.49□□□□□ -0.57
GTPBP3-227ENST00000602056 CCKP06307 115 aa11.48□□□□□ -0.57
GTPBP3-227ENST00000602056 H3BQ85 93 aa11.46□□□□□ -0.57
GTPBP3-227ENST00000602056 KRTAP19-1Q8IUB9 90 aa11.46□□□□□ -0.57
GTPBP3-227ENST00000602056 TMEM256-PLSCR3K7ERE1 68 aa11.45□□□□□ -0.58
GTPBP3-227ENST00000602056 TRACP01848 142 aa11.45□□□□□ -0.58
GTPBP3-227ENST00000602056 KRTAP10-10P60014 251 aa11.45□□□□□ -0.58
GTPBP3-227ENST00000602056 PSMB2P49721 201 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms