RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 SPAG11BQ08648 103 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
VRK3-226ENST00000602029 Q6JHZ5 121 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 PHF5AQ7RTV0 110 aaKnown RBP3.2□□□□□ -1.9
VRK3-226ENST00000602029 FAM19A5Q7Z5A7 132 aaPredicted RBP3.2□□□□□ -1.9
VRK3-226ENST00000602029 PRR26Q8N8Z3 221 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 C2orf48Q96LS8 159 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 FAM218AQ96MZ4 157 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 LOC110117498A0A087WWA1 95 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 A0A1W2PNN7 141 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 BCE1O60756 84 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 CCKP06307 115 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 HIST1H4AP62805 103 aaKnown RBP3.19□□□□□ -1.9
VRK3-226ENST00000602029 OR13C6PQ8NH95 151 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 C22orf24Q9Y442 160 aa3.19□□□□□ -1.9
VRK3-226ENST00000602029 A0A1B0GW54 56 aa3.18□□□□□ -1.9
VRK3-226ENST00000602029 UQCRQO14949 82 aa3.18□□□□□ -1.9
VRK3-226ENST00000602029 GAGE2AQ6NT46 116 aa3.18□□□□□ -1.9
VRK3-226ENST00000602029 hADV29S1A0JD25 119 aa3.17□□□□□ -1.9
VRK3-226ENST00000602029 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
VRK3-226ENST00000602029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.17□□□□□ -1.9
VRK3-226ENST00000602029 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
VRK3-226ENST00000602029 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 FAM236AA0A1B0GUQ0 79 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 FAM236BA0A1B0GV22 79 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 NDUFC2-KCTD14E9PQ53 114 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 H0Y9J4 135 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 SMIM20Q8N5G0 67 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 SMCR5Q8TEV8 140 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 UBL5Q9BZL1 73 aa3.16□□□□□ -1.9
VRK3-226ENST00000602029 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 M0R378 163 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 ELOF1P60002 83 aaKnown RBP3.15□□□□□ -1.91
VRK3-226ENST00000602029 CXCL6P80162 114 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 RBM3P98179 157 aaKnown RBP3.15□□□□□ -1.91
VRK3-226ENST00000602029 C6orf99Q4VX62 202 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
VRK3-226ENST00000602029 ZNF73O43830 326 aaPredicted RBP3.14□□□□□ -1.91
VRK3-226ENST00000602029 CRYGAP11844 174 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 COX7CP15954 63 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 UNQ6190/PRO20217Q6UXQ8 127 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 DSCR8Q96T75 97 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 C6orf48Q9UBA6 75 aa3.14□□□□□ -1.91
VRK3-226ENST00000602029 IGLV5-37A0A075B6J1 123 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 VPREB1P12018 145 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 COX7BP24311 80 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 Q6ZQT0 140 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
VRK3-226ENST00000602029 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 B5MCH6 92 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 H3BS24 57 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 NCR3O14931 201 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 TMEM258P61165 79 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 C10orf25Q5T742 122 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 C9orf153Q5TBE3 101 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
VRK3-226ENST00000602029 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 PRYO14603 147 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 Q6ZQY7 126 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 RETNLBQ9BQ08 111 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 LAMTOR3Q9UHA4 124 aa3.11□□□□□ -1.91
VRK3-226ENST00000602029 ZNF861PO60384 105 aa3.1□□□□□ -1.91
VRK3-226ENST00000602029 UBE2AP49459 152 aa3.1□□□□□ -1.91
VRK3-226ENST00000602029 RPS28P62857 69 aaKnown RBP3.1□□□□□ -1.91
VRK3-226ENST00000602029 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
VRK3-226ENST00000602029 KRTAP11-1Q8IUC1 163 aa3.1□□□□□ -1.91
VRK3-226ENST00000602029 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
VRK3-226ENST00000602029 RPL37AP8A6NKH3 93 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 NDUFC1O43677 76 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 ERC2-IT1O76042 136 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 Q8NDZ9 215 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
VRK3-226ENST00000602029 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 TRAV7A0A075B6U4 112 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 SPRR1AP35321 89 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 Q6ZRX8 168 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 Q6ZVQ6 151 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 MRPL55Q7Z7F7 128 aaKnown RBP3.08□□□□□ -1.92
VRK3-226ENST00000602029 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
VRK3-226ENST00000602029 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
VRK3-226ENST00000602029 IGKV3D-7A0A0C4DH55 119 aa3.07□□□□□ -1.92
VRK3-226ENST00000602029 J3KT08 172 aa3.07□□□□□ -1.92
VRK3-226ENST00000602029 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
VRK3-226ENST00000602029 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
VRK3-226ENST00000602029 LINC00304Q8N9R0 145 aa3.07□□□□□ -1.92
VRK3-226ENST00000602029 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
VRK3-226ENST00000602029 SS18L2Q9UHA2 77 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms