RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 IFITM1P13164 125 aa8.44□□□□□ -1.06
USE1-208ENST00000600970 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
USE1-208ENST00000600970 SCGB1D4Q6XE38 83 aa8.43□□□□□ -1.06
USE1-208ENST00000600970 A8MUU9 505 aa8.42□□□□□ -1.06
USE1-208ENST00000600970 MUSTN1Q8IVN3 82 aa8.42□□□□□ -1.06
USE1-208ENST00000600970 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
USE1-208ENST00000600970 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
USE1-208ENST00000600970 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
USE1-208ENST00000600970 LST1O00453 97 aa8.41□□□□□ -1.06
USE1-208ENST00000600970 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
USE1-208ENST00000600970 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
USE1-208ENST00000600970 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
USE1-208ENST00000600970 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
USE1-208ENST00000600970 Q6ZQY7 126 aa8.4□□□□□ -1.06
USE1-208ENST00000600970 Q6ZVH6 145 aa8.39□□□□□ -1.07
USE1-208ENST00000600970 VAMP3Q15836 100 aa8.37□□□□□ -1.07
USE1-208ENST00000600970 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
USE1-208ENST00000600970 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
USE1-208ENST00000600970 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
USE1-208ENST00000600970 COLCA2A8K830 154 aa8.35□□□□□ -1.07
USE1-208ENST00000600970 C3orf79P0CE67 100 aa8.33□□□□□ -1.08
USE1-208ENST00000600970 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
USE1-208ENST00000600970 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
USE1-208ENST00000600970 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
USE1-208ENST00000600970 H3BUT2 72 aa8.3□□□□□ -1.08
USE1-208ENST00000600970 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BKO60814 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BJP06899 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BOP23527 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BBP33778 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BDP58876 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BCP62807 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST2H2BEQ16778 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.29□□□□□ -1.08
USE1-208ENST00000600970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.29□□□□□ -1.08
USE1-208ENST00000600970 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BHQ93079 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BNQ99877 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 HIST1H2BMQ99879 126 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
USE1-208ENST00000600970 DSCR10P59022 87 aa8.28□□□□□ -1.08
USE1-208ENST00000600970 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
USE1-208ENST00000600970 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
USE1-208ENST00000600970 RBM12B-AS1Q9P1G2 102 aa8.28□□□□□ -1.08
USE1-208ENST00000600970 HRES1P13985 223 aa8.27□□□□□ -1.09
USE1-208ENST00000600970 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
USE1-208ENST00000600970 KRTDAPP60985 99 aa8.26□□□□□ -1.09
USE1-208ENST00000600970 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
USE1-208ENST00000600970 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
USE1-208ENST00000600970 A0A087WSZ3 146 aa8.21□□□□□ -1.1
USE1-208ENST00000600970 KRTAP6-3Q3LI67 103 aa8.2□□□□□ -1.1
USE1-208ENST00000600970 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
USE1-208ENST00000600970 LINC00313P59037 77 aa8.18□□□□□ -1.1
USE1-208ENST00000600970 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
USE1-208ENST00000600970 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
USE1-208ENST00000600970 NDUFV3P56181 108 aaKnown RBP8.13□□□□□ -1.11
USE1-208ENST00000600970 COA6Q5JTJ3 125 aaKnown RBP8.13□□□□□ -1.11
USE1-208ENST00000600970 C12orf57Q99622 126 aa8.12□□□□□ -1.11
USE1-208ENST00000600970 SNRPEP62304 92 aaKnown RBP8.1□□□□□ -1.11
USE1-208ENST00000600970 MTURNQ8N3F0 131 aa8.1□□□□□ -1.11
USE1-208ENST00000600970 IGKV4-1P06312 121 aa8.09□□□□□ -1.11
USE1-208ENST00000600970 H3BMG7 143 aa8.08□□□□□ -1.12
USE1-208ENST00000600970 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
USE1-208ENST00000600970 FAM218AQ96MZ4 157 aa8.05□□□□□ -1.12
USE1-208ENST00000600970 A8MWP4 228 aa8.04□□□□□ -1.12
USE1-208ENST00000600970 SNCGO76070 127 aa8.04□□□□□ -1.12
USE1-208ENST00000600970 S100A1P23297 94 aa8.03□□□□□ -1.12
USE1-208ENST00000600970 DEFB116Q30KQ4 102 aa8.02□□□□□ -1.13
USE1-208ENST00000600970 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
USE1-208ENST00000600970 H0YGX0 51 aa8.01□□□□□ -1.13
USE1-208ENST00000600970 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
USE1-208ENST00000600970 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
USE1-208ENST00000600970 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
USE1-208ENST00000600970 FABP2P12104 132 aa7.99□□□□□ -1.13
USE1-208ENST00000600970 SPINK7P58062 85 aa7.98□□□□□ -1.13
USE1-208ENST00000600970 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
USE1-208ENST00000600970 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
USE1-208ENST00000600970 GHRHP01286 108 aa7.96□□□□□ -1.14
USE1-208ENST00000600970 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
USE1-208ENST00000600970 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
USE1-208ENST00000600970 RAB37Q96AX2 223 aa7.94□□□□□ -1.14
USE1-208ENST00000600970 A0A1B0GX51 115 aa7.93□□□□□ -1.14
USE1-208ENST00000600970 NEBP20929 6669 aa7.92□□□□□ -1.14
USE1-208ENST00000600970 C8orf87E5RJ46 101 aa7.92□□□□□ -1.14
USE1-208ENST00000600970 MUC12Q9UKN1 5478 aa7.91□□□□□ -1.14
USE1-208ENST00000600970 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
USE1-208ENST00000600970 A0A1B0GV72 72 aa7.9□□□□□ -1.14
USE1-208ENST00000600970 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
USE1-208ENST00000600970 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
USE1-208ENST00000600970 COX8AP10176 69 aa7.87□□□□□ -1.15
USE1-208ENST00000600970 HIST1H2BLQ99880 126 aa7.87□□□□□ -1.15
USE1-208ENST00000600970 TRACP01848 142 aa7.86□□□□□ -1.15
USE1-208ENST00000600970 CCKP06307 115 aa7.86□□□□□ -1.15
USE1-208ENST00000600970 HIST3H2BBQ8N257 126 aa7.86□□□□□ -1.15
USE1-208ENST00000600970 DLEU1O43261 78 aa7.82□□□□□ -1.16
USE1-208ENST00000600970 S100A2P29034 98 aa7.82□□□□□ -1.16
USE1-208ENST00000600970 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
USE1-208ENST00000600970 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
USE1-208ENST00000600970 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
USE1-208ENST00000600970 ORMDL1Q9P0S3 153 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms