RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 A0A087WVE0 104 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 UBE2AP49459 152 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 CYSTM1Q9H1C7 97 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 DNAH11Q96DT5 4516 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 FAT2Q9NYQ8 4349 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 A0A1B0GVY2 172 aa10.92□□□□□ -0.66
SHKBP1-224ENST00000600718 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
SHKBP1-224ENST00000600718 HIGD2AQ9BW72 106 aa10.9□□□□□ -0.66
SHKBP1-224ENST00000600718 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
SHKBP1-224ENST00000600718 PSORS1C2Q9UIG4 136 aa10.9□□□□□ -0.66
SHKBP1-224ENST00000600718 DEFB105AQ8NG35 78 aa10.89□□□□□ -0.67
SHKBP1-224ENST00000600718 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 Q8N377 158 aa10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 PKD1P98161 4303 aa10.88□□□□□ -0.67
SHKBP1-224ENST00000600718 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
SHKBP1-224ENST00000600718 RBM3P98179 157 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-224ENST00000600718 DNAH5Q8TE73 4624 aa10.83□□□□□ -0.68
SHKBP1-224ENST00000600718 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
SHKBP1-224ENST00000600718 RYR2Q92736 4967 aa10.81□□□□□ -0.68
SHKBP1-224ENST00000600718 HAMPP81172 84 aa10.81□□□□□ -0.68
SHKBP1-224ENST00000600718 ZNF861PO60384 105 aa10.8□□□□□ -0.68
SHKBP1-224ENST00000600718 DSCR8Q96T75 97 aa10.8□□□□□ -0.68
SHKBP1-224ENST00000600718 LOC110117498A0A087WWA1 95 aa10.78□□□□□ -0.68
SHKBP1-224ENST00000600718 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
SHKBP1-224ENST00000600718 PDE6GP18545 87 aa10.78□□□□□ -0.68
SHKBP1-224ENST00000600718 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
SHKBP1-224ENST00000600718 OXTP01178 125 aa10.77□□□□□ -0.68
SHKBP1-224ENST00000600718 SPRR1BP22528 89 aa10.77□□□□□ -0.68
SHKBP1-224ENST00000600718 SMIM29Q86T20 159 aa10.76□□□□□ -0.69
SHKBP1-224ENST00000600718 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
SHKBP1-224ENST00000600718 KMT2CQ8NEZ4 4911 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-224ENST00000600718 Q6ZQT0 140 aa10.75□□□□□ -0.69
SHKBP1-224ENST00000600718 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-224ENST00000600718 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
SHKBP1-224ENST00000600718 F8WEM9 126 aa10.72□□□□□ -0.69
SHKBP1-224ENST00000600718 Q5XG85 94 aa10.72□□□□□ -0.69
SHKBP1-224ENST00000600718 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
SHKBP1-224ENST00000600718 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
SHKBP1-224ENST00000600718 FAM236DA0A1B0GTK5 79 aa10.69□□□□□ -0.7
SHKBP1-224ENST00000600718 FAM236CP0DP71 79 aa10.69□□□□□ -0.7
SHKBP1-224ENST00000600718 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
SHKBP1-224ENST00000600718 IGLV8-61A0A075B6I0 122 aa10.67□□□□□ -0.7
SHKBP1-224ENST00000600718 CXCL6P80162 114 aa10.66□□□□□ -0.7
SHKBP1-224ENST00000600718 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
SHKBP1-224ENST00000600718 KLKP1Q107X0 134 aa10.66□□□□□ -0.7
SHKBP1-224ENST00000600718 H7BZZ5 65 aa10.65□□□□□ -0.7
SHKBP1-224ENST00000600718 Q6ZVQ6 151 aa10.65□□□□□ -0.7
SHKBP1-224ENST00000600718 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.71
SHKBP1-224ENST00000600718 RPL37AP61513 92 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-224ENST00000600718 HRCT1Q6UXD1 115 aa10.62□□□□□ -0.71
SHKBP1-224ENST00000600718 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
SHKBP1-224ENST00000600718 LRP1BQ9NZR2 4599 aa10.6□□□□□ -0.71
SHKBP1-224ENST00000600718 IGFL1Q6UW32 110 aa10.6□□□□□ -0.71
SHKBP1-224ENST00000600718 A0A1B0GW54 56 aa10.59□□□□□ -0.71
SHKBP1-224ENST00000600718 A0A1W2PNM2 257 aa10.59□□□□□ -0.71
SHKBP1-224ENST00000600718 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-224ENST00000600718 Q8NBF4 154 aa10.59□□□□□ -0.71
SHKBP1-224ENST00000600718 PRO0628Q9UI54 55 aa10.59□□□□□ -0.71
SHKBP1-224ENST00000600718 DYNC1H1Q14204 4646 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-224ENST00000600718 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
SHKBP1-224ENST00000600718 IGLV9-49A0A0B4J1Y8 123 aa10.56□□□□□ -0.72
SHKBP1-224ENST00000600718 NDUFC1O43677 76 aa10.56□□□□□ -0.72
SHKBP1-224ENST00000600718 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-224ENST00000600718 A0A0G2JQZ4 141 aa10.54□□□□□ -0.72
SHKBP1-224ENST00000600718 SPINK6Q6UWN8 80 aa10.54□□□□□ -0.72
SHKBP1-224ENST00000600718 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-224ENST00000600718 RYR3Q15413 4870 aa10.53□□□□□ -0.72
SHKBP1-224ENST00000600718 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
SHKBP1-224ENST00000600718 SNURFQ9Y675 71 aa10.52□□□□□ -0.73
SHKBP1-224ENST00000600718 SMIM26A0A096LP01 95 aa10.51□□□□□ -0.73
SHKBP1-224ENST00000600718 MOBPQ13875 183 aa10.5□□□□□ -0.73
SHKBP1-224ENST00000600718 FAM229BQ4G0N7 80 aa10.5□□□□□ -0.73
SHKBP1-224ENST00000600718 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-224ENST00000600718 NREPQ16612 68 aa10.48□□□□□ -0.73
SHKBP1-224ENST00000600718 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
SHKBP1-224ENST00000600718 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
SHKBP1-224ENST00000600718 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
SHKBP1-224ENST00000600718 APOBP04114 4563 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-224ENST00000600718 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-224ENST00000600718 BPY2O14599 106 aa10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 A0A087WSZ3 146 aa10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 A0A087X002 238 aa10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 TMEM254Q8TBM7 123 aa10.43□□□□□ -0.74
SHKBP1-224ENST00000600718 KRTAP13-2Q52LG2 175 aa10.41□□□□□ -0.74
SHKBP1-224ENST00000600718 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
SHKBP1-224ENST00000600718 CD164Q04900 197 aa10.37□□□□□ -0.75
SHKBP1-224ENST00000600718 OCR1Q9BZK8 76 aa10.37□□□□□ -0.75
SHKBP1-224ENST00000600718 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
SHKBP1-224ENST00000600718 Q5VSD8 79 aa10.34□□□□□ -0.75
SHKBP1-224ENST00000600718 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
SHKBP1-224ENST00000600718 Q8N9L7 120 aa10.31□□□□□ -0.76
SHKBP1-224ENST00000600718 SEC61GP60059 68 aa10.29□□□□□ -0.76
SHKBP1-224ENST00000600718 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
SHKBP1-224ENST00000600718 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms