RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
VRK3-220ENST00000600259 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
VRK3-220ENST00000600259 TRAV23DV6A0A075B6W5 121 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
VRK3-220ENST00000600259 COX8AP10176 69 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 CD164Q04900 197 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 ADAMTSL4-AS1Q5T5F5 129 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 LINC01545Q5VT33 79 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 HSPB8Q9UJY1 196 aa3.21□□□□□ -1.9
VRK3-220ENST00000600259 A6NDN8 102 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 C9orf118A6NHY6 69 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 J3QQQ9 107 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 SCGB1A1P11684 91 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 S100A7L2Q5SY68 101 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 GTF2H5Q6ZYL4 71 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 SMIM29Q86T20 159 aa3.2□□□□□ -1.9
VRK3-220ENST00000600259 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
VRK3-220ENST00000600259 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
VRK3-220ENST00000600259 C2orf91Q6ZV80 131 aa3.19□□□□□ -1.9
VRK3-220ENST00000600259 ATOH7Q8N100 152 aa3.19□□□□□ -1.9
VRK3-220ENST00000600259 VPS25Q9BRG1 176 aa3.19□□□□□ -1.9
VRK3-220ENST00000600259 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 H7C2G1 150 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 K7EP34 96 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 NMUP48645 174 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 HSD52Q0P140 79 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 Q6ZVH6 145 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 LITAFQ99732 161 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
VRK3-220ENST00000600259 A0A0J9YXY3 114 aa3.17□□□□□ -1.9
VRK3-220ENST00000600259 NPC2P61916 151 aa3.17□□□□□ -1.9
VRK3-220ENST00000600259 DHRS4-AS1Q9P1J3 65 aa3.17□□□□□ -1.9
VRK3-220ENST00000600259 HIGD1BQ9P298 99 aa3.17□□□□□ -1.9
VRK3-220ENST00000600259 A0A1W2PPM0 123 aa3.16□□□□□ -1.9
VRK3-220ENST00000600259 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
VRK3-220ENST00000600259 Q1RN00 199 aa3.16□□□□□ -1.9
VRK3-220ENST00000600259 IGLV5-48A0A075B6I7 105 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 TEX49A0A1B0GTD5 131 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 H0Y8G0 127 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 DPM2O94777 84 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 FABP2P12104 132 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.91
VRK3-220ENST00000600259 PLNP26678 52 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 TAL2Q16559 108 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 DEFB105AQ8NG35 78 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 LINC00308Q8TCZ7 52 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 SPANXCQ9NY87 97 aa3.15□□□□□ -1.91
VRK3-220ENST00000600259 E9PLD3 99 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 F8W1H4 67 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 J3QR89 54 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 IGKCP01834 107 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 CFC1P0CG37 223 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 COX7BP24311 80 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 OR13C6PQ8NH95 151 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 SPANXDQ9BXN6 97 aa3.14□□□□□ -1.91
VRK3-220ENST00000600259 TRBV7-6A0A0J9YX20 115 aa3.13□□□□□ -1.91
VRK3-220ENST00000600259 H3BUT2 72 aa3.13□□□□□ -1.91
VRK3-220ENST00000600259 TIMM17BO60830 172 aa3.13□□□□□ -1.91
VRK3-220ENST00000600259 HERVK_113P61574 105 aa3.13□□□□□ -1.91
VRK3-220ENST00000600259 SPCS1Q9Y6A9 102 aa3.13□□□□□ -1.91
VRK3-220ENST00000600259 A0A1B0GWB2 263 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 MT2AP02795 61 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 Q6Q795 121 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 Q75L30 129 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 MTURNQ8N3F0 131 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 SIGMAR1Q99720 223 aa3.12□□□□□ -1.91
VRK3-220ENST00000600259 A0A1B0GV72 72 aa3.11□□□□□ -1.91
VRK3-220ENST00000600259 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
VRK3-220ENST00000600259 CEND1Q8N111 149 aa3.11□□□□□ -1.91
VRK3-220ENST00000600259 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
VRK3-220ENST00000600259 TCL1BO95988 128 aa3.1□□□□□ -1.91
VRK3-220ENST00000600259 MT1FP04733 61 aa3.1□□□□□ -1.91
VRK3-220ENST00000600259 FXYD2P54710 66 aa3.1□□□□□ -1.91
VRK3-220ENST00000600259 PCP2Q8IVA1 136 aa3.1□□□□□ -1.91
VRK3-220ENST00000600259 TTTY13Q9BZ97 58 aa3.1□□□□□ -1.91
VRK3-220ENST00000600259 H3BMG7 143 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 LYRM7Q5U5X0 104 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 ATP11AUNQ6ZP68 121 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 RAB37Q96AX2 223 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 OBSCN-AS1Q96MR7 158 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
VRK3-220ENST00000600259 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
VRK3-220ENST00000600259 TRBV7-7A0A0K0K1E9 115 aa3.07□□□□□ -1.92
VRK3-220ENST00000600259 ZNF815PA8K554 130 aa3.07□□□□□ -1.92
VRK3-220ENST00000600259 A8MUU9 505 aa3.07□□□□□ -1.92
VRK3-220ENST00000600259 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
VRK3-220ENST00000600259 NHP2Q9NX24 153 aaKnown RBP3.07□□□□□ -1.92
VRK3-220ENST00000600259 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
VRK3-220ENST00000600259 TRBV20-1A0A075B6N2 111 aa3.06□□□□□ -1.92
VRK3-220ENST00000600259 A4D1N5 150 aa3.06□□□□□ -1.92
VRK3-220ENST00000600259 KRTAP16-1A8MUX0 517 aa3.06□□□□□ -1.92
VRK3-220ENST00000600259 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
VRK3-220ENST00000600259 SMIM11BQ8TCY0 68 aa3.06□□□□□ -1.92
VRK3-220ENST00000600259 NAA38Q9BRA0 125 aaKnown RBP3.06□□□□□ -1.92
VRK3-220ENST00000600259 K7ERJ3 54 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 IFITM1P13164 125 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms