RNA–Protein interactions for RNA: ENST00000598867.1

SOX2-OT-230, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 348 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-230ENST00000598867 FAM74A1Q5RGS3 127 aa2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 FAM19A2Q8N3H0 131 aa2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 NMES1Q9C002 83 aa2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 LINC00474Q9P2X8 69 aa2.21□□□□□ -2.06
SOX2-OT-230ENST00000598867 H3BVH4 76 aa2.2□□□□□ -2.06
SOX2-OT-230ENST00000598867 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
SOX2-OT-230ENST00000598867 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
SOX2-OT-230ENST00000598867 TRBV25-1A0A075B6N4 114 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 A0A087WXM4 84 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 ZNF56Q15929 161 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 TEN1Q86WV5 123 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 TOMM5Q8N4H5 51 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 ERG28Q9UKR5 140 aa2.19□□□□□ -2.06
SOX2-OT-230ENST00000598867 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 IGHV1-24A0A0C4DH33 117 aa2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 K7ERU9 68 aa2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
SOX2-OT-230ENST00000598867 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 TRBV6-1A0A0K0K1D8 114 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 F8W1H4 67 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 ARMS2P0C7Q2 107 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 CKS2P33552 79 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 IQCJQ1A5X6 159 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 CASC2Q6XLA1 102 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 C5orf17Q8NAS9 161 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 OR10AG1Q8NH19 301 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 AQP10Q96PS8 301 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 MED9Q9NWA0 146 aa2.17□□□□□ -2.06
SOX2-OT-230ENST00000598867 FAM236AA0A1B0GUQ0 79 aa2.16□□□□□ -2.06
SOX2-OT-230ENST00000598867 FAM236BA0A1B0GV22 79 aa2.16□□□□□ -2.06
SOX2-OT-230ENST00000598867 NDUFB6O95139 128 aa2.16□□□□□ -2.06
SOX2-OT-230ENST00000598867 COX7CP15954 63 aa2.16□□□□□ -2.06
SOX2-OT-230ENST00000598867 ASB16-AS1Q495Z4 193 aa2.16□□□□□ -2.06
SOX2-OT-230ENST00000598867 MUC17Q685J3 4493 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 NCR2O95944 276 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 ARL14EPLP0DKL9 152 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 SPCS2Q15005 226 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 CLLU1Q5K131 121 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 Q86TA4 180 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 LINC00526Q96FQ7 95 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 ARL2-SNX15V9GYD0 113 aa2.15□□□□□ -2.07
SOX2-OT-230ENST00000598867 NAP1L6A6NFF2 107 aa2.14□□□□□ -2.07
SOX2-OT-230ENST00000598867 V9GYH0 126 aa2.14□□□□□ -2.07
SOX2-OT-230ENST00000598867 A6NN06 94 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 H3BRM9 83 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 MGPP08493 103 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 GCHFRP30047 84 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 SPANXN1Q5VSR9 72 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 SMIM7Q9BQ49 75 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 SNURFQ9Y675 71 aa2.13□□□□□ -2.07
SOX2-OT-230ENST00000598867 CCL25O15444 150 aa2.12□□□□□ -2.07
SOX2-OT-230ENST00000598867 NUPR1O60356 82 aa2.12□□□□□ -2.07
SOX2-OT-230ENST00000598867 CRIP1P50238 77 aa2.12□□□□□ -2.07
SOX2-OT-230ENST00000598867 UNQ6190/PRO20217Q6UXQ8 127 aa2.12□□□□□ -2.07
SOX2-OT-230ENST00000598867 TMEM167BQ9NRX6 74 aa2.12□□□□□ -2.07
SOX2-OT-230ENST00000598867 LOC110117498A0A087WWA1 95 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 M0QY20 66 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 INE1O15225 51 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 UBE2G1P62253 170 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 ZFP30Q9Y2G7 519 aa2.11□□□□□ -2.07
SOX2-OT-230ENST00000598867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 IGKV2-29A2NJV5 120 aaPredicted RBP2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 ZNF25P17030 456 aaPredicted RBP2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
SOX2-OT-230ENST00000598867 TRBV20-1A0A075B6N2 111 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 IGKV3D-7A0A0C4DH55 119 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 SIX6O95475 246 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 DNAL4O96015 105 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 MT1HP80294 61 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 SPAG11BQ08648 103 aa2.09□□□□□ -2.07
SOX2-OT-230ENST00000598867 A0A1B0GV90 55 aa2.08□□□□□ -2.08
SOX2-OT-230ENST00000598867 IL7P13232 177 aa2.08□□□□□ -2.08
SOX2-OT-230ENST00000598867 PPP1R1CQ8WVI7 109 aa2.08□□□□□ -2.08
SOX2-OT-230ENST00000598867 MRPL35Q9NZE8 188 aaKnown RBP2.08□□□□□ -2.08
SOX2-OT-230ENST00000598867 NDUFA1O15239 70 aa2.07□□□□□ -2.08
SOX2-OT-230ENST00000598867 TCEAL7Q9BRU2 100 aa2.07□□□□□ -2.08
SOX2-OT-230ENST00000598867 PSMG3Q9BT73 122 aaPredicted RBP2.07□□□□□ -2.08
SOX2-OT-230ENST00000598867 CTXND1A0A1B0GTU2 59 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 M0R2T5 61 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 MPC2O95563 127 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 SERF2P84101 59 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 ATOH7Q8N100 152 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
SOX2-OT-230ENST00000598867 C7orf77A4D0Y5 90 aa2.05□□□□□ -2.08
SOX2-OT-230ENST00000598867 BCE1O60756 84 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms