RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 Q6JHZ5 121 aa10.61□□□□□ -0.71
SHKBP1-216ENST00000598201 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
SHKBP1-216ENST00000598201 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
SHKBP1-216ENST00000598201 TNP2Q05952 138 aa10.59□□□□□ -0.71
SHKBP1-216ENST00000598201 Q5XG85 94 aa10.59□□□□□ -0.71
SHKBP1-216ENST00000598201 LINC00336Q6ZUF6 198 aa10.59□□□□□ -0.71
SHKBP1-216ENST00000598201 HIGD2AQ9BW72 106 aa10.59□□□□□ -0.71
SHKBP1-216ENST00000598201 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
SHKBP1-216ENST00000598201 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
SHKBP1-216ENST00000598201 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
SHKBP1-216ENST00000598201 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
SHKBP1-216ENST00000598201 PRO0628Q9UI54 55 aa10.55□□□□□ -0.72
SHKBP1-216ENST00000598201 H0Y9J4 135 aa10.54□□□□□ -0.72
SHKBP1-216ENST00000598201 Q6ZVQ6 151 aa10.54□□□□□ -0.72
SHKBP1-216ENST00000598201 HRCT1Q6UXD1 115 aa10.54□□□□□ -0.72
SHKBP1-216ENST00000598201 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
SHKBP1-216ENST00000598201 SRRM2Q9UQ35 2752 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-216ENST00000598201 OXTP01178 125 aa10.53□□□□□ -0.72
SHKBP1-216ENST00000598201 UBE2AP49459 152 aa10.53□□□□□ -0.72
SHKBP1-216ENST00000598201 BCE1O60756 84 aa10.52□□□□□ -0.73
SHKBP1-216ENST00000598201 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.73
SHKBP1-216ENST00000598201 DNAH11Q96DT5 4516 aa10.51□□□□□ -0.73
SHKBP1-216ENST00000598201 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
SHKBP1-216ENST00000598201 KRTAP13-1Q8IUC0 172 aa10.51□□□□□ -0.73
SHKBP1-216ENST00000598201 A0A087WVE0 104 aa10.5□□□□□ -0.73
SHKBP1-216ENST00000598201 ATP5EP2Q5VTU8 51 aa10.5□□□□□ -0.73
SHKBP1-216ENST00000598201 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
SHKBP1-216ENST00000598201 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
SHKBP1-216ENST00000598201 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
SHKBP1-216ENST00000598201 KRTAP10-2P60368 255 aa10.49□□□□□ -0.73
SHKBP1-216ENST00000598201 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
SHKBP1-216ENST00000598201 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
SHKBP1-216ENST00000598201 HAMPP81172 84 aa10.48□□□□□ -0.73
SHKBP1-216ENST00000598201 A0A0G2JQZ4 141 aa10.46□□□□□ -0.73
SHKBP1-216ENST00000598201 A0A1B0GVY2 172 aa10.46□□□□□ -0.73
SHKBP1-216ENST00000598201 Q8NBF4 154 aa10.45□□□□□ -0.74
SHKBP1-216ENST00000598201 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
SHKBP1-216ENST00000598201 F8WEM9 126 aa10.44□□□□□ -0.74
SHKBP1-216ENST00000598201 SPRR1BP22528 89 aa10.44□□□□□ -0.74
SHKBP1-216ENST00000598201 PKD1P98161 4303 aa10.43□□□□□ -0.74
SHKBP1-216ENST00000598201 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
SHKBP1-216ENST00000598201 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
SHKBP1-216ENST00000598201 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
SHKBP1-216ENST00000598201 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
SHKBP1-216ENST00000598201 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
SHKBP1-216ENST00000598201 CXCL6P80162 114 aa10.4□□□□□ -0.74
SHKBP1-216ENST00000598201 NREPQ16612 68 aa10.4□□□□□ -0.74
SHKBP1-216ENST00000598201 A0A1B0GW54 56 aa10.37□□□□□ -0.75
SHKBP1-216ENST00000598201 SERP1Q9Y6X1 66 aa10.37□□□□□ -0.75
SHKBP1-216ENST00000598201 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
SHKBP1-216ENST00000598201 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
SHKBP1-216ENST00000598201 PKHD1P08F94 4074 aa10.35□□□□□ -0.75
SHKBP1-216ENST00000598201 ZNF861PO60384 105 aa10.33□□□□□ -0.76
SHKBP1-216ENST00000598201 Q8N9L7 120 aa10.33□□□□□ -0.76
SHKBP1-216ENST00000598201 EPPK1P58107 5090 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-216ENST00000598201 FAM236DA0A1B0GTK5 79 aa10.32□□□□□ -0.76
SHKBP1-216ENST00000598201 FAM236CP0DP71 79 aa10.32□□□□□ -0.76
SHKBP1-216ENST00000598201 SEC61GP60059 68 aa10.32□□□□□ -0.76
SHKBP1-216ENST00000598201 BPY2O14599 106 aa10.31□□□□□ -0.76
SHKBP1-216ENST00000598201 Q6ZSA8 131 aa10.31□□□□□ -0.76
SHKBP1-216ENST00000598201 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
SHKBP1-216ENST00000598201 V9GYY9 64 aa10.3□□□□□ -0.76
SHKBP1-216ENST00000598201 A0A087WSZ3 146 aa10.28□□□□□ -0.76
SHKBP1-216ENST00000598201 IGLV7-43P04211 117 aa10.28□□□□□ -0.76
SHKBP1-216ENST00000598201 SMIM26A0A096LP01 95 aa10.27□□□□□ -0.76
SHKBP1-216ENST00000598201 IGKV4-1P06312 121 aa10.27□□□□□ -0.76
SHKBP1-216ENST00000598201 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.76
SHKBP1-216ENST00000598201 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
SHKBP1-216ENST00000598201 ZNF706Q9Y5V0 76 aaPredicted RBP10.26□□□□□ -0.77
SHKBP1-216ENST00000598201 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
SHKBP1-216ENST00000598201 DSCR10P59022 87 aa10.22□□□□□ -0.77
SHKBP1-216ENST00000598201 C1orf195Q5TG92 126 aa10.22□□□□□ -0.77
SHKBP1-216ENST00000598201 DEFB116Q30KQ4 102 aa10.21□□□□□ -0.77
SHKBP1-216ENST00000598201 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-216ENST00000598201 H7BZZ5 65 aa10.2□□□□□ -0.78
SHKBP1-216ENST00000598201 MOBPQ13875 183 aa10.18□□□□□ -0.78
SHKBP1-216ENST00000598201 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-216ENST00000598201 KLKP1Q107X0 134 aa10.18□□□□□ -0.78
SHKBP1-216ENST00000598201 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-216ENST00000598201 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
SHKBP1-216ENST00000598201 K7EQZ3 153 aa10.17□□□□□ -0.78
SHKBP1-216ENST00000598201 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
SHKBP1-216ENST00000598201 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-216ENST00000598201 CDK2AP2O75956 126 aa10.13□□□□□ -0.79
SHKBP1-216ENST00000598201 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
SHKBP1-216ENST00000598201 NDUFC1O43677 76 aa10.13□□□□□ -0.79
SHKBP1-216ENST00000598201 VPS13BQ7Z7G8 4022 aa10.12□□□□□ -0.79
SHKBP1-216ENST00000598201 BIRC6Q9NR09 4857 aa10.11□□□□□ -0.79
SHKBP1-216ENST00000598201 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
SHKBP1-216ENST00000598201 APOBP04114 4563 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-216ENST00000598201 Q96NJ1 140 aa10.06□□□□□ -0.8
SHKBP1-216ENST00000598201 KIAA1109Q2LD37 5005 aa10.06□□□□□ -0.8
SHKBP1-216ENST00000598201 OCR1Q9BZK8 76 aa10.05□□□□□ -0.8
SHKBP1-216ENST00000598201 A0A087X002 238 aa10.04□□□□□ -0.8
SHKBP1-216ENST00000598201 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
SHKBP1-216ENST00000598201 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-216ENST00000598201 A8MWP4 228 aa10.02□□□□□ -0.81
SHKBP1-216ENST00000598201 PRR15Q8IV56 129 aa10.02□□□□□ -0.81
SHKBP1-216ENST00000598201 RYR1P21817 5038 aa10.02□□□□□ -0.81
SHKBP1-216ENST00000598201 A0A0U1RQV1 116 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms