RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
SSBP4-205ENST00000598159 DLEU1O43261 78 aa12.48□□□□□ -0.41
SSBP4-205ENST00000598159 Q6JHZ5 121 aa12.47□□□□□ -0.41
SSBP4-205ENST00000598159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.46□□□□□ -0.41
SSBP4-205ENST00000598159 C12orf57Q99622 126 aa12.46□□□□□ -0.41
SSBP4-205ENST00000598159 IGLV8-61A0A075B6I0 122 aa12.45□□□□□ -0.42
SSBP4-205ENST00000598159 OCIAD2Q56VL3 154 aa12.44□□□□□ -0.42
SSBP4-205ENST00000598159 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
SSBP4-205ENST00000598159 IGFL1Q6UW32 110 aa12.4□□□□□ -0.42
SSBP4-205ENST00000598159 CLEC2BQ92478 149 aa12.4□□□□□ -0.42
SSBP4-205ENST00000598159 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
SSBP4-205ENST00000598159 CFC1P0CG37 223 aa12.39□□□□□ -0.43
SSBP4-205ENST00000598159 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
SSBP4-205ENST00000598159 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
SSBP4-205ENST00000598159 TRBV7-7A0A0K0K1E9 115 aa12.38□□□□□ -0.43
SSBP4-205ENST00000598159 HIGD1BQ9P298 99 aa12.38□□□□□ -0.43
SSBP4-205ENST00000598159 SNCGO76070 127 aa12.36□□□□□ -0.43
SSBP4-205ENST00000598159 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
SSBP4-205ENST00000598159 RPL37P61927 97 aaKnown RBP12.35□□□□□ -0.43
SSBP4-205ENST00000598159 LCE2CQ5TA81 110 aa12.35□□□□□ -0.43
SSBP4-205ENST00000598159 SPATA45Q537H7 98 aa12.34□□□□□ -0.43
SSBP4-205ENST00000598159 PAM16Q9Y3D7 125 aa12.34□□□□□ -0.43
SSBP4-205ENST00000598159 H0YGX0 51 aa12.33□□□□□ -0.44
SSBP4-205ENST00000598159 A0A0B4J2C4 111 aa12.32□□□□□ -0.44
SSBP4-205ENST00000598159 KRTAP19-2Q3LHN2 52 aa12.32□□□□□ -0.44
SSBP4-205ENST00000598159 VAMP8Q9BV40 100 aa12.31□□□□□ -0.44
SSBP4-205ENST00000598159 C2orf91Q6ZV80 131 aa12.27□□□□□ -0.45
SSBP4-205ENST00000598159 H3BUT2 72 aa12.26□□□□□ -0.45
SSBP4-205ENST00000598159 CEND1Q8N111 149 aa12.26□□□□□ -0.45
SSBP4-205ENST00000598159 LST1O00453 97 aa12.24□□□□□ -0.45
SSBP4-205ENST00000598159 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 A6NJY4 79 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 GHRHP01286 108 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 Q6Q795 121 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 PRO1854Q9UHT4 67 aa12.23□□□□□ -0.45
SSBP4-205ENST00000598159 A0A1B0GX51 115 aa12.22□□□□□ -0.45
SSBP4-205ENST00000598159 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
SSBP4-205ENST00000598159 MT1HP80294 61 aa12.21□□□□□ -0.45
SSBP4-205ENST00000598159 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
SSBP4-205ENST00000598159 TEN1Q86WV5 123 aa12.19□□□□□ -0.46
SSBP4-205ENST00000598159 SS18L2Q9UHA2 77 aa12.19□□□□□ -0.46
SSBP4-205ENST00000598159 OBSCN-AS1Q96MR7 158 aa12.17□□□□□ -0.46
SSBP4-205ENST00000598159 KRTAP9-6A0A140TA67 174 aa12.16□□□□□ -0.46
SSBP4-205ENST00000598159 H3BMG7 143 aa12.14□□□□□ -0.47
SSBP4-205ENST00000598159 FXYD2P54710 66 aa12.14□□□□□ -0.47
SSBP4-205ENST00000598159 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
SSBP4-205ENST00000598159 Q75L30 129 aa12.14□□□□□ -0.47
SSBP4-205ENST00000598159 FABP2P12104 132 aa12.13□□□□□ -0.47
SSBP4-205ENST00000598159 TRIAP1O43715 76 aa12.1□□□□□ -0.47
SSBP4-205ENST00000598159 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
SSBP4-205ENST00000598159 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
SSBP4-205ENST00000598159 A0A087WSZ3 146 aa12.08□□□□□ -0.48
SSBP4-205ENST00000598159 Q96NJ1 140 aa12.08□□□□□ -0.48
SSBP4-205ENST00000598159 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
SSBP4-205ENST00000598159 H3BQ85 93 aa12.06□□□□□ -0.48
SSBP4-205ENST00000598159 HSD52Q0P140 79 aa12.06□□□□□ -0.48
SSBP4-205ENST00000598159 DNAL4O96015 105 aa12.04□□□□□ -0.48
SSBP4-205ENST00000598159 PSMB2P49721 201 aa12.03□□□□□ -0.48
SSBP4-205ENST00000598159 COX6CP09669 75 aa12.02□□□□□ -0.49
SSBP4-205ENST00000598159 ORMDL1Q9P0S3 153 aa12.02□□□□□ -0.49
SSBP4-205ENST00000598159 A0A1W2PNM2 257 aa12.01□□□□□ -0.49
SSBP4-205ENST00000598159 M0R2T5 61 aa12.01□□□□□ -0.49
SSBP4-205ENST00000598159 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
SSBP4-205ENST00000598159 C20orf166-AS1Q96NR2 134 aa12□□□□□ -0.49
SSBP4-205ENST00000598159 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
SSBP4-205ENST00000598159 LORP23490 312 aaPredicted RBP11.99□□□□□ -0.49
SSBP4-205ENST00000598159 KRTAP10-6P60371 365 aaPredicted RBP11.99□□□□□ -0.49
SSBP4-205ENST00000598159 A8MUU9 505 aa11.97□□□□□ -0.49
SSBP4-205ENST00000598159 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
SSBP4-205ENST00000598159 K7ERJ3 54 aa11.96□□□□□ -0.49
SSBP4-205ENST00000598159 UQCR10Q9UDW1 63 aa11.95□□□□□ -0.5
SSBP4-205ENST00000598159 DSCR10P59022 87 aa11.9□□□□□ -0.5
SSBP4-205ENST00000598159 UBE2V1Q13404 147 aa11.9□□□□□ -0.5
SSBP4-205ENST00000598159 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
SSBP4-205ENST00000598159 LINC00313P59037 77 aa11.89□□□□□ -0.51
SSBP4-205ENST00000598159 A0A1B0GV72 72 aa11.88□□□□□ -0.51
SSBP4-205ENST00000598159 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
SSBP4-205ENST00000598159 FLGP20930 4061 aaPredicted RBP11.87□□□□□ -0.51
SSBP4-205ENST00000598159 CRCT1Q9UGL9 99 aa11.87□□□□□ -0.51
SSBP4-205ENST00000598159 TRACP01848 142 aa11.86□□□□□ -0.51
SSBP4-205ENST00000598159 CCKP06307 115 aa11.86□□□□□ -0.51
SSBP4-205ENST00000598159 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
SSBP4-205ENST00000598159 LINC00472Q9H8W2 130 aa11.83□□□□□ -0.52
SSBP4-205ENST00000598159 TRBV20-1A0A075B6N2 111 aa11.82□□□□□ -0.52
SSBP4-205ENST00000598159 FSIP2Q5CZC0 6907 aa11.81□□□□□ -0.52
SSBP4-205ENST00000598159 RBM3P98179 157 aaKnown RBP11.79□□□□□ -0.52
SSBP4-205ENST00000598159 DEFB116Q30KQ4 102 aa11.79□□□□□ -0.52
SSBP4-205ENST00000598159 KRTAP16-1A8MUX0 517 aa11.78□□□□□ -0.52
SSBP4-205ENST00000598159 DSCR8Q96T75 97 aa11.77□□□□□ -0.53
SSBP4-205ENST00000598159 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
SSBP4-205ENST00000598159 VPS25Q9BRG1 176 aa11.74□□□□□ -0.53
SSBP4-205ENST00000598159 BAALC-AS2P0C853 105 aa11.73□□□□□ -0.53
SSBP4-205ENST00000598159 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
SSBP4-205ENST00000598159 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.53
SSBP4-205ENST00000598159 C9JAW5 83 aa11.69□□□□□ -0.54
SSBP4-205ENST00000598159 SMIM6P0DI80 62 aa11.68□□□□□ -0.54
SSBP4-205ENST00000598159 C8orf87E5RJ46 101 aa11.67□□□□□ -0.54
SSBP4-205ENST00000598159 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
SSBP4-205ENST00000598159 M0R143 59 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 998.4 ms